prot_F-serratus_M_contig70.18193.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig70.18193.1
Unique Nameprot_F-serratus_M_contig70.18193.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length367
Homology
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: UPI001F43F645 (hypothetical protein n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F43F645)

HSP 1 Score: 68.9 bits (167), Expect = 3.860e-9
Identity = 43/152 (28.29%), Postives = 74/152 (48.68%), Query Frame = 0
Query:   97 RENGKNRRPSNK-FEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXXG---------------EWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVE 232
            R +GK + P+ K F+G C+NCGK GH+A +C++ KK  EK                            EW  DSGAT H+   +   + Y  A P   + + +     V+G+G++ + +     + K++ +++V +VP + +NLVS    V+
Sbjct:  246 RHSGKEKNPNKKKFKGNCYNCGKAGHKAPDCRAPKKDKEKNKGQANMVEDVDDLCAMLSECNMVGNPKEWWLDSGATRHVCAVKEAFTTYTPAGPNEELYMGNTATAKVEGYGKVLLKMT----SGKVLTLNNVMHVPSIRKNLVSAALLVK 393          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: A0A0J8B0L4_BETVV (CCHC-type domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0L4_BETVV)

HSP 1 Score: 65.5 bits (158), Expect = 6.560e-9
Identity = 50/135 (37.04%), Postives = 66/135 (48.89%), Query Frame = 0
Query:  104 RPSNKFEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXXGEW-----ES---DSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKA 230
            +P  +  G+CFNCGKRGH A +C+S KKK E              E      ES   DSGA+ HM+  +  +SN+ +      I  ADG  +   G G ++V     GR  K V + DV YVP L  NL+S   A
Sbjct:   57 KPKRQPRGRCFNCGKRGHFAKDCRSPKKKEESSSTDELAFVAGDQEELYAVAESCYVDSGASRHMTGNKGLLSNFVELLDAVKIVTADGRTICGIGTGDMKV-----GRG-KTVTLKDVLYVPDLKMNLLSVSAA 185          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: H3GP57_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP57_PHYRM)

HSP 1 Score: 62.8 bits (151), Expect = 5.080e-7
Identity = 67/252 (26.59%), Postives = 113/252 (44.84%), Query Frame = 0
Query:    9 KFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRGEIERVVGKQYNRLLRQQ-----QDSKALSASRGTI--TANRENGKNRRPSNKFEGQCFNCGKRGHRAVECKSTKKK-----NEKPGXXXXXXXXXXGEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNI-LPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVL 247
            K + E+++L  ++   G +   E   C  ++  L A YE   +    +   L    +  +VGK     +RQ+     +++ AL A++G    T  ++ G  R+PS    G CFNCGK GH A +C+S         +E               W  DSGA+ HM  TR    +Y   +   S+  A  +  L V G G +++ +   GR+    R+++  +V  LS+NL S   A    G  +I  +++ V+
Sbjct:  103 KHVTELEQLVLEMKSAGCEPSDE-DVCATLLRSLPASYESLVQAFRMSMTELK---LTDLVGKLIAEEVRQKDSTRIEEATALLANKGYAKDTKKKQQGGRRKPS----GACFNCGKMGHYARDCRSQASPENEVLDESNVAFNVTEMFASESWVMDSGASTHMCKTREAFKDYTPMTKSYSVASAKSSAKLKVLGHGTVQLRV-WSGRSWINARLENALHVQDLSKNLFSLTAATAH-GVTVIMTQDKCVI 344          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: A0A0J7K4F4_LASNI (Rna-dependent dna polymerase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K4F4_LASNI)

HSP 1 Score: 62.4 bits (150), Expect = 6.970e-7
Identity = 67/260 (25.77%), Postives = 109/260 (41.92%), Query Frame = 0
Query:   13 EVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRGEIERVVGKQYNRLLRQ-QQDSKALSASRGT------ITANRENGKNRRPS----------NKFEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXXG--------EWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVL 247
            E    AG L   G +   EL   ++++  L   YE     +E   D      +E +  K      RQ ++D+K  +A  GT         N + GK  RP+           KF+G+CFNC K GHR+ +C+S KK ++                       W  DS AT HM + +       K         A+  +  +   G + ++L    R  K+++++++ YVP L  NL+S V  V + G  + + +NRA +
Sbjct:  124 EFSSKAGQLEEAGIEIPEELLS-IMLLGSLPTQYENFSVAIEYRDDI---PPLEVLKAKPKEEEARQNERDTK--TADNGTKNDALLARGNTDRGKQSRPNWKGNNTKTNFQKFDGKCFNCDKIGHRSRDCRSKKKSDKAANSDDVLTAIACNAELIRKSESWCLDSSATRHMCNDKQKFEVINKDEQSRVYTAAEHYVKSIK-TGNVSLNLKANQRENKVIKLENILYVPELRNNLLS-VPTVTERGYNVTFNKNRAYI 375          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: A0A0J7KAH3_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KAH3_LASNI)

HSP 1 Score: 62.0 bits (149), Expect = 9.430e-7
Identity = 57/229 (24.89%), Postives = 103/229 (44.98%), Query Frame = 0
Query:   37 IIVSGLSADYEMECRMLENNPDGLNRGEIERVVGKQYNRLLRQQQDSKALSASRGTITANRENGKNRRPSNKFEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXX-------GEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFK 258
            +++SGL  +Y      LE++   +    I+  + ++     +Q  +++A   S+   T        ++  +K +G+CF CGK GH A +C++  + + K                    EW  DSGA+ HM+   + + + KK     +I  A+   L     G  E+ +   G   K++R+++V YVPGL+ NL+S    V++  K  I      +    GE + V K
Sbjct:  145 LLLSGLPDEYRPMIMGLESSGTAITADAIKVKILQEVKHGGKQSTETEAALYSKARATR-------KKSQDKVKGKCFACGKTGHFAAKCRNKARDDNKEKDSSTHKVFATFAQAGKNDEWYLDSGASTHMTGWSSCLKDMKKCDK--TITAANRGQLKAVAHGVAEIGVTVNGGE-KVIRVENVLYVPGLAANLLSVGVIVQRDYKVTITKNGCTIHDADGELTAVAK 363          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: A0A2G3BPT2_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BPT2_CAPCH)

HSP 1 Score: 61.6 bits (148), Expect = 1.300e-6
Identity = 42/145 (28.97%), Postives = 71/145 (48.97%), Query Frame = 0
Query:   98 ENGKNRRPSNKFEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXXG----------------EWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVS 226
            E G N+ P  KF+G+CFNCGK GH++++C++ KK  +K                             EW  DSG T H+   +   S++  A     I +A+     V+G G++ + +     + K++ +++V Y+P L RNL+S
Sbjct:  392 EQGSNQ-PKKKFKGKCFNCGKIGHKSMDCRAPKKGKKKYQANMFESNKEYDDLCAMFSEYNLVGDPREWWMDSGVTRHVCANKELFSSFAPAQVEEMIYMANSVTAKVEGTGKVCLKMT----SGKVLTLNNVLYIPELRRNLIS 531          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: F0X119_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X119_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.510e-6
Identity = 47/179 (26.26%), Postives = 87/179 (48.60%), Query Frame = 0
Query:   36 VIIVSGLSADYEMECRMLENNPDGLNRGEIERVVGKQYNRLLRQQQDSKALSASRGTITANRENGKNRRPSNKFEGQCFNCGKRGHRAVECKSTK--KKNEKPGXXXXXXXXXXGEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDL---DQPGRTTKMV 209
            ++++   S DY+   +++ENN  G++    + ++ ++Y R +R+++   AL  +R   ++     K ++  + F+G+ FNCGK GHR V+C+  +    +EK            G W  DSGA+ HM   +   +  +       I VA+   +   G G++ V L   DQ    T +V
Sbjct:   17 MMLLGSFSNDYDNIVKIIENN-QGMDSFRTKEMLNREYERSIRKEKSQSALKTTRKMDSSGAR--KQKQIDHGFQGKFFNCGKDGHRKVDCRKNRIIPSDEKE---FTCSDGSHGGWILDSGASSHMCPFQDEFAGIRPLGEVVLISVANDVQIEAKGIGKVRVILRIRDQSALKTALV 189          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: A0A438IYJ4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IYJ4_VITVI)

HSP 1 Score: 61.2 bits (147), Expect = 1.880e-6
Identity = 42/163 (25.77%), Postives = 72/163 (44.17%), Query Frame = 0
Query:  108 KFEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXXG-------------------EWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPG 251
            KF+G+CFNCGK+GH++V+C+  KK   K                                EW  D+GAT H+   +   S ++    G  + + +     + G G++ + +     + K + + +V YVP + +NLVS    +   G  L++  N+ VL   G
Sbjct:  275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVSDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFESNKVVLSKSG 432          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: H3H7C1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7C1_PHYRM)

HSP 1 Score: 60.1 bits (144), Expect = 2.070e-6
Identity = 66/253 (26.09%), Postives = 111/253 (43.87%), Query Frame = 0
Query:    9 KFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRGEI------ERVVGKQYNRLLRQQQDSKALSASRGTI--TANRENGKNRRPSNKFEGQCFNCGKRGHRAVECKSTKKK-----NEKPGXXXXXXXXXXGEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNI-LPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVL 247
            K + E+++L  ++   G +   E   C  ++  L A YE   +    +   L   ++      E V  K   R+    +++ AL A++G    T  ++ G  R+PS    G CFNCGK GH A +C+S         +E               W  DSGA+ HM  TR    N+   +   S+  A  +  L V G G +++ +   GR+    R+++  +V  LS+NL S   A    G  +I  +++ V+
Sbjct:   37 KHVTELEQLVLEMKSAGCEPSDE-DVCATLLRSLPASYESLVQAFRMSMTELKLTDLVDKLIAEEVRQKDSTRI----EEATALLANKGYAKDTKKKQQGGRRKPS----GACFNCGKMGHYARDCRSKASPENEVLDESNVAFNVTEMFASESWVMDSGASTHMCKTREAFKNHTPMTKSYSVASAKSSAKLKVLGHGTVQLRV-WSGRSWINARLENALHVQDLSKNLFSLTAATAH-GVTVIMTQDKCVI 278          
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Match: A0A438IK41_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IK41_VITVI)

HSP 1 Score: 60.8 bits (146), Expect = 2.390e-6
Identity = 42/163 (25.77%), Postives = 72/163 (44.17%), Query Frame = 0
Query:  108 KFEGQCFNCGKRGHRAVECKSTKKKNEKPGXXXXXXXXXXG-------------------EWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPG 251
            KF+G+CFNCGK+GH++V+C+  KK   K                                EW  D+GAT H+   +   S ++    G  + + +     + G G++ + +     + K + + +V YVP + +NLVS    +   G  L++  N+ VL   G
Sbjct:  224 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVSDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDQKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVSG-SLLNNHGFRLVFESNKVVLSKSG 381          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F43F6453.860e-928.29hypothetical protein n=1 Tax=Corynebacterium parak... [more]
A0A0J8B0L4_BETVV6.560e-937.04CCHC-type domain-containing protein (Fragment) n=1... [more]
H3GP57_PHYRM5.080e-726.59Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
A0A0J7K4F4_LASNI6.970e-725.77Rna-dependent dna polymerase n=1 Tax=Lasius niger ... [more]
A0A0J7KAH3_LASNI9.430e-724.89Retrovirus-related pol polyprotein from transposon... [more]
A0A2G3BPT2_CAPCH1.300e-628.97Uncharacterized protein n=1 Tax=Capsicum chinense ... [more]
F0X119_9STRA1.510e-626.26Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
A0A438IYJ4_VITVI1.880e-625.77Retrovirus-related Pol polyprotein from transposon... [more]
H3H7C1_PHYRM2.070e-626.09CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A438IK41_VITVI2.390e-625.77Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 112..128
e-value: 5.0E-4
score: 29.4
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 112..128
e-value: 2.0E-5
score: 24.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 113..128
score: 10.098
NoneNo IPR availableGENE3D4.10.60.10coord: 92..141
e-value: 1.5E-6
score: 30.0
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 83..229
NoneNo IPR availablePANTHERPTHR34676:SF1coord: 83..229
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 97..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig70contigF-serratus_M_contig70:610937..612333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig70.18193.1mRNA_F-serratus_M_contig70.18193.1Fucus serratus malemRNAF-serratus_M_contig70 610850..612379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig70.18193.1 ID=prot_F-serratus_M_contig70.18193.1|Name=mRNA_F-serratus_M_contig70.18193.1|organism=Fucus serratus male|type=polypeptide|length=367bp
MEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMEC
RMLENNPDGLNRGEIERVVGKQYNRLLRQQQDSKALSASRGTITANRENG
KNRRPSNKFEGQCFNCGKRGHRAVECKSTKKKNEKPGAAAEKKEGGGGEW
ESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNILPVDGFGRIEVDLD
QPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLP
GEESLVFKFCPRRGLFSATGARRIARQETSPHACAPERGHHKKDGCYDGD
RDDGPVGGVRDVLSSQSKATRRAQEDRRTGERERTAILRRRGRADETLES
RREQLRRHFCGRLHPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf