prot_F-serratus_M_contig6990.18104.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6990.18104.1
Unique Nameprot_F-serratus_M_contig6990.18104.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length170
Homology
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BLAST of mRNA_F-serratus_M_contig6990.18104.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 9.850e-29
Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 0 
Query:    1 MALADTQGFRLAIDRSLFGPQERRWNERKLPDVATNMACTVLYTFGACVLVYHICCDYNTLGSRGCLEMIPKHVFSAVAIHVVAIVLRWKIERMLRLSFRINDE 104
            MAL DTQGF +A+DRSLFGPQ RRW ERKLP+VATN+A   +  FGAC+LV+HI  +Y T G    L+  PKH+ +AV +H+VA  LRW I+RML ++F   DE
Sbjct:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNLAFVAVSAFGACLLVFHITREYYTSGYWAILQT-PKHILNAVVLHLVARALRWHIDRMLGVNFAAGDE 103
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BLAST of mRNA_F-serratus_M_contig6990.18104.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.080e-22
Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 0 
Query:    1 MALADTQGFRLAIDRSLFGPQERRWNERKLPDVATNMACTVLYTFGACVLVYHICCDYNTLGSRGCLEMIPKHVFSAVAIHVVAIVLRWKIERMLRLSFRIND 103
            MAL D     +A+DRSLFGPQ RRW ERKLP+V +NM   ++  FGAC+L++ IC DY   G  G L  +PKH+ +A  +H++A +LRW I ++++ SF  +D
Sbjct:    1 MALVDINPLTVAVDRSLFGPQGRRWIERKLPEVTSNMTFIMVSGFGACLLMFGICTDYQRFGFVGGLGCLPKHIAAATLVHLLAKLLRWHITQVVQGSFMPDD 103
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BLAST of mRNA_F-serratus_M_contig6990.18104.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.430e-7
Identity = 28/73 (38.36%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   27 ERKLPDVATNMACTVLYTFGACVLVYHICCDYNTLGSRGCLEMIPKHVFSAVAIHVVAIVLRWKIERMLRLSF 99
            E KLP V +N+   ++  FGAC+L++ +C DY   G       +PKH+ +A  +H+VA +LRW I R +  +F
Sbjct:   61 EHKLPYVVSNITFILVSGFGACLLMFTVCADYQRGGLLRGAAALPKHLANAAVLHLVARLLRWHIGRTVYRAF 133
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6990.18104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE9.850e-2957.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZHV2_9STRA1.080e-2247.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA3.430e-738.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..169
NoneNo IPR availableTMHMMTMhelixcoord: 70..87
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6990contigF-serratus_M_contig6990:7718..12890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6990.18104.1mRNA_F-serratus_M_contig6990.18104.1Fucus serratus malemRNAF-serratus_M_contig6990 7557..13890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6990.18104.1 ID=prot_F-serratus_M_contig6990.18104.1|Name=mRNA_F-serratus_M_contig6990.18104.1|organism=Fucus serratus male|type=polypeptide|length=170bp
MALADTQGFRLAIDRSLFGPQERRWNERKLPDVATNMACTVLYTFGACVL
VYHICCDYNTLGSRGCLEMIPKHVFSAVAIHVVAIVLRWKIERMLRLSFR
INDEDRSDSTEESDTRDEVLSHDDHVERSQSVEMVPAQEEATATVMTEAA
VAGGDAARDADGVESDLFF*
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