prot_F-serratus_M_contig696.18066.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig696.18066.1
Unique Nameprot_F-serratus_M_contig696.18066.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length191
Homology
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: D7FMN3_ECTSI (Ribosome biogenesis regulatory protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN3_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 7.010e-78
Identity = 128/179 (71.51%), Postives = 142/179 (79.33%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVMIGKSKSADKEG 179
            MVWD+D+KEWRPRHGYKRANDGVLNH IVE+K GKD   +PW+EAR EKK RV KN++ RAKN ERA G AKPGIPVDL    KD +G         GG   KRGK  TKGALE+VQ STASMGKFDERR AEPERR  KGVRRAFKPVTV SG+ET+ H+KILN+VMIGKSKSADK+G
Sbjct:  129 MVWDDDLKEWRPRHGYKRANDGVLNHAIVEVKPGKDPMANPWSEAREEKKGRVEKNLSNRAKNVERAGGGAKPGIPVDLLPSAKDGSG--------GGGAPAKRGKANTKGALELVQHSTASMGKFDERRHAEPERRKGKGVRRAFKPVTVGSGEETQGHLKILNSVMIGKSKSADKDG 299          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A7S2UUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.550e-31
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPG--AAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGD-ETRSHIKILNAVMIGKSKS 174
            MVWD    ++RPR GY+R  +  ++HPIVE+KEG D   DPW   +  KK RV KN+ ++ KNQ  A    AA  GIPVDL S        A A G ++    +KRG+  T+  L +VQ STASMGKFDE R  EPE++  +G RR F+P+  A    E+++ +K + A+++ K KS
Sbjct:  284 MVWDEATGKYRPRFGYQRGGEDHMDHPIVEVKEGHDPLADPWTAKKVAKKGRVAKNMLQQMKNQLHAGNTRAAPAGIPVDLVSATARSVASARAAGTMK--PVLKRGRDKTEKTLRLVQNSTASMGKFDEVRQGEPEKKARQGKRRKFQPLLSAQPKAESQAQLKTVQAILVNKGKS 458          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A812RX42_SYMMI (Ribosome biogenesis regulatory protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RX42_SYMMI)

HSP 1 Score: 101 bits (251), Expect = 1.180e-22
Identity = 69/164 (42.07%), Postives = 90/164 (54.88%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQER---APGAAK--------------PGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFK 147
            MV+D   +E++PR GYK  N G   H I+E+ EG+D   DPWA ARA KKARV KN   R +N ER     G  K              PGIPV+L S             G +     KRGK G + AL++VQ STASMG++DE R  EPE++  +G +R+F+
Sbjct:   51 MVFDEQTEEYKPRFGYKGINQGEEEHAIIEVGEGQDPYADPWAAARAGKKARVEKNEKHRERNAERLSVGKGRGKKGKHAAVTYDPSSVPGIPVNLESST-----------GSDPSSNRKRGKQGVRSALQLVQHSTASMGRYDEVRYGEPEKKI-RGKKRSFR 202          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A485KFR7_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFR7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.910e-22
Identity = 78/201 (38.81%), Postives = 102/201 (50.75%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKP--------GIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSA----DKEGGPQLK 184
            MVWD   + W P+ GYKRAND  LN     +K G D   DPW EA+ +K  RV KN+  +A N +   G A          G+PV+L +    +A               +RGK GTK AL+ VQ STASMGKFD++R  E ER+ H G R  F  VT A   E    + +L  V+      GK+KSA    D++  P+ K
Sbjct:  124 MVWDEAKQIWAPKWGYKRANDD-LNDWAKPVKGGADPYADPWTEAKQDKAERVQKNLRNQANNLKMGRGKAPTLPVSKTPLGVPVELLNTDDKKA--------------KQRGKEGTKAALQKVQFSTASMGKFDKKREGEGERK-HVGKRNKFLSVTGAEKTEKERSMNVLQHVLGREENKGKAKSASHGDDEDRDPKKK 308          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A067CPT1_SAPPC (Ribosome biogenesis regulatory protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPT1_SAPPC)

HSP 1 Score: 99.4 bits (246), Expect = 1.380e-21
Identity = 76/197 (38.58%), Postives = 99/197 (50.25%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERA---------PGAAKPGIPVDL--ASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSADKEGGP 181
            MVWD   + W PR GYKRAND + +   V +K+  D   DPW E +  K  RV KN+  +A N +RA         P A   GIPV++   S +K +                +RGK GTK AL+ VQ STASMGKFD+ R  E ER+   G R  F  VT A   E    + +LN V+      GK+K++  E  P
Sbjct:  124 MVWDEAKQAWAPRWGYKRANDDMQDW-AVPVKKNDDPFADPWTERKQAKNERVQKNLRNQAANVKRAGGMQPSVPVPKATPVGIPVEMLNTSDKKMK----------------QRGKEGTKAALQKVQFSTASMGKFDKMRTGEAERKQT-GKRNKFLSVTGAEKTEKERSMHVLNHVLGREENKGKAKASTGEDDP 302          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A6G0WAM1_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAM1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.070e-21
Identity = 74/188 (39.36%), Postives = 98/188 (52.13%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKN-------QERAPGAAKP-GIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSA 175
            MVWD   + W P+ GYKRAND  LN   + +K+G+D   DPW E + EK  RV KN+  +A N       Q   P +  P G+PV+L +    +A               +RGK GTK AL+ VQ STASMGKFD++R  E ER+   G R  F  VT A   E    + +L  V+      GK+KS+
Sbjct:  125 MVWDEAKQAWAPKWGYKRANDD-LNDWAMPVKQGQDPYSDPWTENKQEKTERVQKNLRNQANNLKHGRGKQPTMPVSKTPLGVPVELLNTDDKKA--------------KQRGKEGTKAALQKVQFSTASMGKFDKKREGEGERKQT-GKRNKFLSVTGAEKTEKERSMNVLQHVLGREENKGKAKSS 296          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A1V9ZJR0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJR0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.760e-21
Identity = 73/181 (40.33%), Postives = 94/181 (51.93%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVMIGKSKSADKEGGP 181
            MVWD   + W PR GYKRAND  +N   V +K+  D   DPW E +  K  RV KN+  +A N +   G  +P +PV  A   K   G+           A +RGK GTK AL+ VQ STASMGKFD+ R  E ER+   G R  F  VT A   E    + +LN V+ G+ ++  K   P
Sbjct:  124 MVWDEAKQAWAPRWGYKRANDD-MNDWAVPVKKNDDPFADPWTERKQAKAERVQKNLRNQANNLKNGRGI-QPSVPVPSAP--KTPLGIPVEMLDTADKKAKQRGKEGTKAALQKVQFSTASMGKFDKMRTGEAERKQT-GKRNKFLSVTGAEKTEKERSMSVLNHVL-GREENKGKAKAP 298          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A1V9ZCQ0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCQ0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.050e-21
Identity = 68/176 (38.64%), Postives = 89/176 (50.57%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGA--------AKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM 168
            MVWD + + W PR GYKRAND + +  I  +K+  D   DPW E +  K  RV KN+  +A N +   G         A  GIPV+L   +  +                +RGK GTK AL+ VQ STASMGKFD+ R  E ER+  KG R  F  VT +   E    + +LN V+
Sbjct:  124 MVWDEEKQAWAPRWGYKRANDDIHDWAIP-VKKNDDPYADPWTERKQAKAERVQKNMRNQANNLKNGRGITPSVPVPKAPVGIPVELLDTQDKKT--------------KQRGKEGTKAALQKVQFSTASMGKFDKMRQGEAERKQ-KGKRNKFLSVTGSEQTEKERSMSVLNHVL 283          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A024TRU1_9STRA (Ribosome biogenesis regulatory protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TRU1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.010e-20
Identity = 76/206 (36.89%), Postives = 102/206 (49.51%), Query Frame = 0
Query:    1 MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSAD---------------KEGGPQLKGV 186
            MVWD   + W P+ GYKRAND   +  +  +K G D   DPW E + EK  RV KN+  +A N ++  G  +P  PV      K   GV       +     +RGK GTK AL+ VQ STASMGKFD++R  E ER+ H G R  F  VT +   E    + +L  ++      GK+K+A                K GGP+LK +
Sbjct:  124 MVWDEAKQIWAPKWGYKRANDDSGDWAMP-VKAGADPYADPWTEKKQEKAERVQKNLRNQANNLKQGRGK-QPAFPVS-----KTPLGVPVELLNTDDKKLKQRGKEGTKAALQKVQFSTASMGKFDKKREGEGERK-HVGKRNKFLSVTGSEKTEKERSMNVLQHLLGREENKGKAKAASHSDGGDDDVGGKKGKKRGGPKLKNI 321          
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A7S4AIZ9_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AIZ9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.690e-18
Identity = 78/200 (39.00%), Postives = 99/200 (49.50%), Query Frame = 0
Query:    2 VWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAK-----------PGIPVDLASGRKDRAGVAAAGGGLEGGVAMK-------------RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRN--HKGVRRAF-----KPVTVASGDETRSHIKILNAVMIG 170
            VWD     W  RHGY++AN      PI+E+    D   DPW + R EK+ R+++NI +R KN+ERA   AK                 L +GRKD   + A   GL   V +K             RGK  T  AL  VQ+STAS+GKFD+ R  EPER+    K  +R F     K V  + GD   S +KILNAVM G
Sbjct:  234 VWDETSGTWMFRHGYEKANRKENEWPIMEVGANDDPYEDPWEKQRMEKRTRLDRNIERRMKNEERAGNLAKGATNRTMKARDQAYNAGLVAGRKDNKSLPA---GLP--VDLKNSVDPNKSADNKLRGKSSTLAALSAVQKSTASLGKFDKMREGEPERKKGLSKTKKRKFENPTDKKVLRSEGD---SSMKILNAVMNG 425          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMN3_ECTSI7.010e-7871.51Ribosome biogenesis regulatory protein n=2 Tax=Ect... [more]
A0A7S2UUR0_9STRA4.550e-3143.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A812RX42_SYMMI1.180e-2242.07Ribosome biogenesis regulatory protein n=1 Tax=Sym... [more]
A0A485KFR7_9STRA1.910e-2238.81Ribosome biogenesis regulatory protein n=1 Tax=Aph... [more]
A0A067CPT1_SAPPC1.380e-2138.58Ribosome biogenesis regulatory protein n=2 Tax=Sap... [more]
A0A6G0WAM1_9STRA2.070e-2139.36Ribosome biogenesis regulatory protein n=1 Tax=Aph... [more]
A0A1V9ZJR0_9STRA2.760e-2140.33Ribosome biogenesis regulatory protein n=1 Tax=Ach... [more]
A0A1V9ZCQ0_9STRA5.050e-2138.64Ribosome biogenesis regulatory protein n=1 Tax=Thr... [more]
A0A024TRU1_9STRA3.010e-2036.89Ribosome biogenesis regulatory protein n=5 Tax=Aph... [more]
A0A7S4AIZ9_9STRA1.690e-1839.00Ribosome biogenesis regulatory protein n=1 Tax=Pse... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007023Ribosomal biogenesis regulatory proteinPFAMPF04939RRS1coord: 1..64
e-value: 5.5E-13
score: 49.1
IPR007023Ribosomal biogenesis regulatory proteinPANTHERPTHR17602RIBOSOME BIOGENESIS REGULATORY PROTEINcoord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig696contigF-serratus_M_contig696:127984..131453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig696.18066.1mRNA_F-serratus_M_contig696.18066.1Fucus serratus malemRNAF-serratus_M_contig696 127890..132873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig696.18066.1 ID=prot_F-serratus_M_contig696.18066.1|Name=mRNA_F-serratus_M_contig696.18066.1|organism=Fucus serratus male|type=polypeptide|length=191bp
MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKK
ARVNKNITKRAKNQERAPGAAKPGIPVDLASGRKDRAGVAAAGGGLEGGV
AMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVT
VASGDETRSHIKILNAVMIGKSKSADKEGGPQLKGVAGRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007023Ribosom_reg