prot_F-serratus_M_contig694.18043.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig694.18043.1
Unique Nameprot_F-serratus_M_contig694.18043.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length134
Homology
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BLAST of mRNA_F-serratus_M_contig694.18043.1 vs. uniprot
Match: A0A6H5KSZ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSZ7_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.570e-21
Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 0 
Query:    1 MRTSTLLGMVGMTLSCCTPCAIGFVVPSGRLPPGTSSGTASERHMLNQHPRRGSLRALAAEGKPAKGEGGEEEQGPMDLNLEQMFEVFEAADKEVSDEAVGKKSDSTKTPGA-GKDPAEAMGDMLSNFFGGGKK 133
            MRTS    +   +L+C +  A  F+ PS  +   +++ T+     +++         L AE      E G EEQ PMDL+LEQMFEVFEAADKEVSDE VGKK    K P A  KDPAEAMGDMLS+FFGGG+K
Sbjct:    1 MRTSATSFIAAGSLACLSS-ASAFLFPSAAVDLRSAAPTSVASQSISRSSSGRRAVILFAEK-----EDGAEEQEPMDLDLEQMFEVFEAADKEVSDEEVGKKGG--KKPAARAKDPAEAMGDMLSSFFGGGEK 126
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BLAST of mRNA_F-serratus_M_contig694.18043.1 vs. uniprot
Match: A0A835YKL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKL6_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.780e-7
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:   78 DLNLEQMFEVFEAADKEVSDEAVGKKSDSTKTPGAGKDPAEAMGDMLSNFFGGGKK 133
            DLNLE MFEVF+ ADK +SD+ VGK          GKD  + + DML + FGG K+
Sbjct:    9 DLNLEDMFEVFDKADKSISDKEVGK--------AGGKDAGKDIADMLGSLFGGKKE 56
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig694.18043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSZ7_9PHAE1.570e-2149.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKL6_9STRA7.780e-750.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..133
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.623

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig694contigF-serratus_M_contig694:179127..182279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig694.18043.1mRNA_F-serratus_M_contig694.18043.1Fucus serratus malemRNAF-serratus_M_contig694 178846..182320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig694.18043.1 ID=prot_F-serratus_M_contig694.18043.1|Name=mRNA_F-serratus_M_contig694.18043.1|organism=Fucus serratus male|type=polypeptide|length=134bp
MRTSTLLGMVGMTLSCCTPCAIGFVVPSGRLPPGTSSGTASERHMLNQHP
RRGSLRALAAEGKPAKGEGGEEEQGPMDLNLEQMFEVFEAADKEVSDEAV
GKKSDSTKTPGAGKDPAEAMGDMLSNFFGGGKK*
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