prot_F-serratus_M_contig692.18020.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig692.18020.1
Unique Name	prot_F-serratus_M_contig692.18020.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	287

Homology

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BLAST of mRNA_F-serratus_M_contig692.18020.1 vs. uniprot
Match: A0A6H5KWW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW8_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.770e-66
Identity = 126/188 (67.02%), Postives = 144/188 (76.60%), Query Frame = 0

Query:  105 ADFLMRQKLESGKAAVLCGGVGAASRLLAVGAGVIAPP-FMRDALAMPQPDTSALLFGLASGSVQGALFGLTYRYVVRSDRQTGASSSR-----PKLDGFTTEHLGDGCVAAFALTSALGQSEMTLTTAAAAFVSVLERGGGVAEAVAMGLLPAASFLPRAAGDLLLYSAAREALDRALDSGGVESFP 286
            +DFL  QKLES +AAVLCG VGA SRLLAVGAG + P    R+ALA P+P  S+LLFGLA+G  QGALFGLTYRYVVRSDR+   S++      P++DGFT  HLGDGCVAAFALTSALGQSE  LT AA  FV VL RGGG+ EA+A  LLPAA FLPRAA DL LY+AAR A+DRALD G ++ FP
Sbjct:  163 SDFLFEQKLESVRAAVLCGSVGATSRLLAVGAGGLLPGGLFREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSATTGEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGILEALAAVLLPAAPFLPRAAADLFLYTAARLAIDRALDEGVIKPFP 350

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BLAST of mRNA_F-serratus_M_contig692.18020.1 vs. uniprot
Match: D8LP08_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP08_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.050e-61
Identity = 117/175 (66.86%), Postives = 134/175 (76.57%), Query Frame = 0

Query:   99 RQLQYSADFLMRQKLESGKAAVLCGGVGAASRLLAVGAGVIAPP-FMRDALAMPQPDTSALLFGLASGSVQGALFGLTYRYVVRSDRQTGASSSR-----PKLDGFTTEHLGDGCVAAFALTSALGQSEMTLTTAAAAFVSVLERGGGVAEAVAMGLLPAASFLPRAAGDLLLYS 267
            +Q  + +DFL  QKLES +AAVLCG VGAASRLLAVGAG + P   +R+ALA P+P  S+LLFGLA+G  QGALFGLTYRYVVRSDR+   S++      P++DGFT  HLGDGCVAAFALTSALGQSE  LT AA  FV VL RGGG+ EA+A  LLPAA FLPRAA DL LYS
Sbjct:   65 QQHHHDSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPGGLLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSATTGEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVRVLWRGGGILEALAAVLLPAAPFLPRAAADLFLYS 239

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BLAST of mRNA_F-serratus_M_contig692.18020.1 vs. uniprot
Match: A0A7S2XV80_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV80_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.490e-5
Identity = 57/175 (32.57%), Postives = 90/175 (51.43%), Query Frame = 0

Query:  109 MRQKLESGKAAVLCGGVGAASRL-LAVGAGVIAPPFMRDALAMPQPDT-SALLFGLASGSVQGALFGLTYRYVVRSDRQTGASSSRPKLD-GFTTEHLGDGCVAAFALTSALGQSEMTLTTAAAAFVSVLERGGGVAEAVAMGLLPAASFLPRAAGDLLLYSAAREALDRALDSG 280
            + Q++ES K+AV+ G     +RL L V  G      + D       DT S ++  + S +++GALFGL YRYV+RSD +      +PK +  F+ + LG G  AAFALTS L  +E  L+   + F+S+  +  G    +   L+ +A      A   + +  A+  +D  LD+G
Sbjct:   91 LSQRIESLKSAVVGGAAVGGTRLALTVLDGTKPWNMVNDV------DTLSRVIVEVGSATLEGALFGLLYRYVIRSDMK------KPKDELVFSADQLGGGAAAAFALTSFLPANEERLSRILSDFLSLALQLDGKQADLGTTLMESAYTSGSFALSFIGFLVAKITIDSCLDAG 253

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig692.18020.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig692.18020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KWW8_9PHAE	1.770e-66	67.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LP08_ECTSI	7.050e-61	66.86	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A7S2XV80_9STRA	4.490e-5	32.57	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 145..155
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 118..144
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 156..176
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..117
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 177..286
None	No IPR available	TMHMM	TMhelix		coord: 155..174
None	No IPR available	TMHMM	TMhelix		coord: 118..140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig692	contig	F-serratus_M_contig692:290585..295806 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig692.18020.1	mRNA_F-serratus_M_contig692.18020.1	Fucus serratus male	mRNA	F-serratus_M_contig692 290566..295873 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig692.18020.1 ID=prot_F-serratus_M_contig692.18020.1|Name=mRNA_F-serratus_M_contig692.18020.1|organism=Fucus serratus male|type=polypeptide|length=287bp
MLISSGRWLRTLQCITSALLFHFSYSFCWKASLVRVDVSCYAQPTPCFNR
NLLMSRRGNRAPSPPAPAVRGQRRRRTSLWAEEAQQDEDPALSVQPPVRQ
LQYSADFLMRQKLESGKAAVLCGGVGAASRLLAVGAGVIAPPFMRDALAM
PQPDTSALLFGLASGSVQGALFGLTYRYVVRSDRQTGASSSRPKLDGFTT
EHLGDGCVAAFALTSALGQSEMTLTTAAAAFVSVLERGGGVAEAVAMGLL
PAASFLPRAAGDLLLYSAAREALDRALDSGGVESFP*