prot_F-serratus_M_contig692.18015.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig692.18015.1
Unique Nameprot_F-serratus_M_contig692.18015.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length119
Homology
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: UPI0011327E8C (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI0011327E8C)

HSP 1 Score: 100 bits (250), Expect = 2.480e-24
Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            D+P T  EA    +  +W  A+K E+D      VW  VD P+G   +G K VFK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E
Sbjct:   53 DDPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYE 161          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A2I0K9M6_PUNGR (CCHC-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K9M6_PUNGR)

HSP 1 Score: 104 bits (259), Expect = 1.320e-23
Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            D+PTT  EA +  +  +W  A+K EMD      VW  VD PKG   +G K +FKRK+G DG+VE YK R VAKG+RQ +G+ Y+E+ SP     SIR+ L V A  D+E
Sbjct:  389 DDPTTYEEAILDIDSSKWLEAMKSEMDSMSKNQVWDLVDPPKGIVPIGNKWIFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSIRIMLVVAAHYDYE 497          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A1R3JQF5_COCAP (Uncharacterized protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3JQF5_COCAP)

HSP 1 Score: 103 bits (258), Expect = 1.380e-23
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            DEPTT  EA    E  +W  A+K EMD      VW  VD PKG   +G K +FK+K   DG V  YK RFVAKGFRQI G+ Y E+ SP     SIR+ LA+ A  D+E
Sbjct:  396 DEPTTYQEAVAGPESEKWLEAMKSEMDSMYANQVWTLVDPPKGIKPIGCKWLFKKKTDMDGNVHTYKGRFVAKGFRQIHGVDYDETFSPVAMLKSIRILLAIAAFYDYE 504          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 100 bits (250), Expect = 1.710e-23
Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            D+P T  EA    +  +W  A+K E+D      VW  VD P+G   +G K VFK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E
Sbjct:   58 DDPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYE 166          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI)

HSP 1 Score: 103 bits (258), Expect = 1.830e-23
Identity = 54/109 (49.54%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            DEP T  EA  S E  +W  AL+ EMD      VW  VD PKG   +G K VFK+K+  DG V+ YK R VAKGFRQI G++Y E+ SP     SIR++LA+ A  D+E
Sbjct:  444 DEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYE 552          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A2I0IJP3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IJP3_PUNGR)

HSP 1 Score: 102 bits (254), Expect = 2.350e-23
Identity = 51/109 (46.79%), Postives = 68/109 (62.39%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            D+PTT  EA    +  +W  A+K EMD      VW  VD P+G   +G K VFKRK+G DG+VE YK R VAKG+RQ +G+ Y+E+ SP     S+R+ LA+ A  D+E
Sbjct:   74 DDPTTYEEAISDIDSSKWLEAMKSEMDSMSKNQVWDLVDPPEGIVPIGNKWVFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSLRIMLAIAAHYDYE 182          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR)

HSP 1 Score: 103 bits (256), Expect = 3.490e-23
Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            DEP T  EA    E+ +W  A+K EMD   T  VW  +D P+G   +G K VFK+K+  DG+V  YK R VAKGF+QI G+ Y E+ SP     SIR+ LA+ A  D+E
Sbjct:  765 DEPVTYTEAITGPEYEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYE 873          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A2K3MK28_TRIPR (Putative retrotransposon Ty1-copia subclass protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MK28_TRIPR)

HSP 1 Score: 98.2 bits (243), Expect = 3.520e-23
Identity = 50/109 (45.87%), Postives = 63/109 (57.80%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            DEP T  EA    E  +W  A+K EMD   T  VW  V+ P+G   +G K VFK+K   DG V  YK R VAKGF+QI G+ Y E+ SP     SI++ LA+ A  D+E
Sbjct:   52 DEPVTYQEAVTGPESAKWLEAMKSEMDSMYTNQVWNLVEAPEGINPIGCKWVFKKKTDMDGNVSTYKARLVAKGFKQIHGVDYDETFSPVAMVKSIQILLAIAAYHDYE 160          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A5N6P523_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P523_9ASTR)

HSP 1 Score: 100 bits (249), Expect = 1.250e-22
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0
Query:   12 EPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            EP T  EA  SSE PQW+ A+K E+D  +    W+ VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ AL D E
Sbjct:  240 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPSGFKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLMLAIAALRDLE 347          
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Match: A0A401G6E6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G6E6_9APHY)

HSP 1 Score: 100 bits (250), Expect = 2.080e-22
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 119
            +EP +L+ AK SSEWP+W +A++ E++     G W+ VD P+G+T +G K V  +K  ++G V K+K R VAKG+ QI G+ Y E+ SP     +IR  L + A+LDW+
Sbjct:  230 NEPKSLNNAKNSSEWPKWETAVQAELEQLDNMGTWELVDLPQGRTPVGNKWVLVKKTNREGEVIKFKARLVAKGYSQILGMDYTETYSPVVRLETIRAILGLAAILDWD 338          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig692.18015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0011327E8C2.480e-2446.79hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A2I0K9M6_PUNGR1.320e-2347.71CCHC-type domain-containing protein n=1 Tax=Punica... [more]
A0A1R3JQF5_COCAP1.380e-2349.54Uncharacterized protein n=1 Tax=Corchorus capsular... [more]
UPI000D4648531.710e-2346.79hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A8J5YBS1_9ROSI1.830e-2349.54Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A2I0IJP3_PUNGR2.350e-2346.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A396GW39_MEDTR3.490e-2346.79Putative RNA-directed DNA polymerase n=2 Tax=Medic... [more]
A0A2K3MK28_TRIPR3.520e-2345.87Putative retrotransposon Ty1-copia subclass protei... [more]
A0A5N6P523_9ASTR1.250e-2247.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A401G6E6_9APHY2.080e-2243.12Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..118
e-value: 5.1E-16
score: 59.1
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 12..116
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig692contigF-serratus_M_contig692:183746..184102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig692.18015.1mRNA_F-serratus_M_contig692.18015.1Fucus serratus malemRNAF-serratus_M_contig692 183746..184102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig692.18015.1 ID=prot_F-serratus_M_contig692.18015.1|Name=mRNA_F-serratus_M_contig692.18015.1|organism=Fucus serratus male|type=polypeptide|length=119bp
MPTGLASYLPDEPTTLHEAKMSSEWPQWRSALKREMDGQITRGVWKAVDR
PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPT
PTQSSIRMALAVMALLDWE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like