prot_F-serratus_M_contig69.17965.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig69.17965.1
Unique Nameprot_F-serratus_M_contig69.17965.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length115
Homology
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BLAST of mRNA_F-serratus_M_contig69.17965.1 vs. uniprot
Match: D8LGS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS6_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.150e-29
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:    1 MAYGAACLGFAAKIALFTPRNEPPQNA-DNIVLSFLSSEVCREVGGVLILTSAMMQCASIGKPLSGSSK---QTAGGKVVSIAGVVVAAAAIVLGLFLPGYLERTGIVVPAHCGG 111
            MAYGAACLG A   A   PR EP +   D IVL+FLSSEV RE GG  IL  AM  CA + +P   ++     T+G  V+ +  V VA A +VLG++LPGYL+R GI VPAHCGG
Sbjct:   75 MAYGAACLGLAGHSAFLAPRGEPLETGNDGIVLTFLSSEVAREAGGAFILAQAMAMCAFVWRPRDATATGAPSTSGRAVIGVVSVAVALAGVVLGVYLPGYLQRAGIAVPAHCGG 189
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGS6_ECTSI2.150e-2953.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..114
NoneNo IPR availableTMHMMTMhelixcoord: 75..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig69contigF-serratus_M_contig69:242464..242808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig69.17965.1mRNA_F-serratus_M_contig69.17965.1Fucus serratus malemRNAF-serratus_M_contig69 241710..244014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig69.17965.1 ID=prot_F-serratus_M_contig69.17965.1|Name=mRNA_F-serratus_M_contig69.17965.1|organism=Fucus serratus male|type=polypeptide|length=115bp
MAYGAACLGFAAKIALFTPRNEPPQNADNIVLSFLSSEVCREVGGVLILT
SAMMQCASIGKPLSGSSKQTAGGKVVSIAGVVVAAAAIVLGLFLPGYLER
TGIVVPAHCGGEGE*
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