prot_F-serratus_M_contig688.17942.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE) HSP 1 Score: 338 bits (866), Expect = 7.890e-112 Identity = 203/338 (60.06%), Postives = 225/338 (66.57%), Query Frame = 0
Query: 14 SCRYCMQSRAASYQCFPSRQQRSL---RPSFSKEDVLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRF-----RGEGGT--------YAGSV-PLEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAWTNLCGNEIIDVVLAD 334
+C+ MQ+R C S + R L RPSF EDVLYMDN +L VNKPAGLLSQ+DRTGD DV LAREYVR+A NK G+AFVALVHRLDRPVSGVM VARTSKAAARLSASFR R GVEKIYHA+VAG L G G R+D LVS GA+ R GRGPRT + P GG G + G TS E K A LEW AID+ A LRCPR+G+P TLVRVRL+TGRKHQIRVQLA MG PVVGD RYGR RG T AGS+ PLEDRSILLHAS L++PHPTR VR VA PP W++LCG ID V D
Sbjct: 11 ACKVLMQARVQRQACAASSRARPLQPRRPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARR-GRGPRTGLSSAPVRGGAGGRLLAA--GPTSSS---------EGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPRAGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVFGD 336
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.560e-69 Identity = 136/237 (57.38%), Postives = 152/237 (64.14%), Query Frame = 0
Query: 108 MSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVP----------LEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAWTNLCGNEIIDVVLAD 334
M VARTSKAAARLSASFR R VEKIYHA+VAG L G G R+DLLVS GA+ R GRGPR + P GG G + G TS P+ K A LEW AI++ S A LRCPR+G+P TLVRVRL+TGRKHQIRVQLA MG PVVGD RYGR RG T +VP LEDRSILLHAS L++PHPTR TVR VA PP W++LCG ID V D
Sbjct: 1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARR-GRGPRAGLSSVPARGGAGGRLLAA--GPTSS---------PDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGD 225
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT) HSP 1 Score: 181 bits (460), Expect = 2.220e-52 Identity = 113/275 (41.09%), Postives = 149/275 (54.18%), Query Frame = 0
Query: 45 DVLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAW 319
+VLY+DN +L V KP GLL+QADRTGDTD+L + +++ +KPG+ F+ LVHRLDRPVSGVM +ARTSKAA RLS +FR R VEK Y A+V G+++G+G RED L+ GR + D P+ KRA+L W A+ L+LV V+L+TGR HQ+RVQLA +G P++GD RYG R L+ R++ LHA L HP R E + APPP +W
Sbjct: 2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKEDGRVRIVSADH---------------------------------------PKGKRAVLRWQALG-------------EEGRLSLVEVKLLTGRAHQVRVQLAALGTPILGDFRYGATR----------ELDGRNLALHAYRLAFEHPVR-REPLVFTAPPPVSW 212
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT) HSP 1 Score: 177 bits (448), Expect = 2.100e-50 Identity = 120/276 (43.48%), Postives = 150/276 (54.35%), Query Frame = 0
Query: 45 DVLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLED-RSILLHASGLVIPHPTRPAETVRVVAPPPKAW 319
++L++DN +L V KPAG+LSQ D TGD DV A+ +++ NKPG+ FV LV RLDRP SGVM +ARTSKAA+RL+ FR R VEK+Y A+V GKL GSG ED L F T D T + R + AK+A+LEW A+ T+R TLVRV L TGR HQ+RVQL G+G P+VGD+RY A VPL D SI LHA+ L + HPT+ + R A PP AW
Sbjct: 4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPASGVMVLARTSKAASRLTEQFRKR-SVEKVYLALVEGKLEGSGRLEDWL---------------------------------FKTHDT-ETGTRVKRVSSTTSGAKKAVLEWRALA-------TVRG------RTLVRVVLETGRPHQVRVQLGGIGHPIVGDLRY----------AAPVPLGDGHSIALHAAHLALDHPTQ-KDRRRFTAAPPPAW 220
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78) HSP 1 Score: 174 bits (442), Expect = 1.300e-49 Identity = 120/275 (43.64%), Postives = 142/275 (51.64%), Query Frame = 0
Query: 45 DVLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAW 319
DVLY+DN +L VNKP GLL+QAD TGD DVL L + +++ KPG F+ LVHRLDRP SGVM +ARTSKAAARLS FR R EK Y A+V G TG+GT D LV G RT R + P A+RA L W + L+LV VRL TGR HQ+RVQLA G P++GD RYG R PL+ R++ LHA L I HPTR + VAPPP AW
Sbjct: 4 DVLYLDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHLVKAG-------------RTVRVVPATH--------------------------PGARRAELAWRVL-----------ATDEAERLSLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGASR----------PLDGRNLALHAYRLGIEHPTRRVP-MHWVAPPPAAW 216
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT) HSP 1 Score: 169 bits (428), Expect = 1.510e-47 Identity = 114/275 (41.45%), Postives = 142/275 (51.64%), Query Frame = 0
Query: 45 DVLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAW 319
DVLY+DN +L VNKP G+L+QAD TGDTDV+ L + Y++ KPG+ F+ LVHRLDRP SGVM +ARTSKAAARLS FR RH EK Y A+V G G+GT D L+ G RT R + P KRA L W + S ++LV VRL TGR HQIRVQLA G P++GD+RYG + P + R++ LH+ L + HPTR V PPP +W
Sbjct: 4 DVLYLDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLLKVG-------------RTVRVVPATH--------------------------PGGKRAELAWRVLG-------------SDGRVSLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRYGARQ----------PFDGRNLALHSWYLGLEHPTRRVAMAWHVPPPP-SW 214
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT) HSP 1 Score: 169 bits (428), Expect = 1.960e-47 Identity = 116/288 (40.28%), Postives = 148/288 (51.39%), Query Frame = 0
Query: 45 DVLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLED-RSILLHASGLVIPHPTRPAETVRVVAPPPKAWTNLCGNEIIDVV 331
DVLY+DN +L V KPAG+LSQAD TGD DV+ A++++R +KPG+ F LVHRLDRPV G M +ARTSKAA+RL+ FR R EK Y A+V G+L GSG D L+ R RG R R DG AKRA++ W + + + LV V L TGR HQIRVQL+G+G P+VGD+RYG PL D R I LHA+ L I HPT+ + + PP+ W I ++V
Sbjct: 4 DVLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLK-------TRDPKRGTRVKRVRQGTDG---------------------------AKRAVMTWTSRSVLGTRS-------------LVEVGLETGRAHQIRVQLSGLGHPIVGDLRYGA----------EAPLGDGRGIALHATHLTIEHPTK-RDRRTFTSAPPRVWGGAFDPAIREIV 232
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A1M5AMY6_9DELT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Desulfacinum infernum DSM 9756 TaxID=1121391 RepID=A0A1M5AMY6_9DELT) HSP 1 Score: 165 bits (418), Expect = 1.200e-45 Identity = 113/274 (41.24%), Postives = 143/274 (52.19%), Query Frame = 0
Query: 46 VLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAW 319
VLY DN +L V KPAGLL Q DRTGD +LELAR +++ KPG+ F+ LVHRLDRPVSGV+ ARTSKAA+RLS SFR R V++ Y A+V G+ E +V + R G R T P A+RA L + ++ +G +L+ VRL TGRKHQIRVQLA +GCP+ GD+RYG S PL ++ I LHA + PHPTR A V +V P P+ W
Sbjct: 16 VLYEDNHILGVYKPAGLLVQGDRTGDPCLLELARRWIKEEYGKPGNVFLGLVHRLDRPVSGVLVFARTSKAASRLSRSFRERETVKE-YLAVVEGRPKDP---EATIVHH-----VHRVPGGSTRVTAGTHPA-----------------------------AQRASLSYRVLE-------------TGGSRSLLFVRLDTGRKHQIRVQLAALGCPIAGDLRYGA----------SKPLANQQIALHARRICFPHPTR-ASMVEIVCPVPRQW 227
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT) HSP 1 Score: 164 bits (414), Expect = 2.000e-45 Identity = 113/284 (39.79%), Postives = 144/284 (50.70%), Query Frame = 0
Query: 47 LYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLED-RSILLHASGLVIPHPTRPAETVRVVAPPPKAWTNLCGNEIID 329
LY+DN +L V+KP GLL+QADRTGD D++ LA+ Y++ +KPG+ FV LVHRLDRP SGVM +ARTSKAA+RLS FR R +K Y A+V G G G T + D G G G E +RA L + + S +LV V L+TGRKHQIR QLA +G P++GD RYG P D R + LHA LV+ HPT+ E V VVAPPP+AW L + + +
Sbjct: 4 LYLDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPASGVMMLARTSKAASRLSDQFR-RRVPQKRYLAVVEGD-----------------------PGDGGAWTERVDAIDKGGGGSVDVVPVG--------------EGQRAALRYRTL-------------ARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRYGN----------QTPFADGRGVALHAYRLVVEHPTK-REPVTVVAPPPEAWAGLFPDAVAE 225
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Match: A0A5S9IDS9_RHOMR (RNA pseudouridine synthase n=4 Tax=Rhodothermus marinus TaxID=29549 RepID=A0A5S9IDS9_RHOMR) HSP 1 Score: 158 bits (400), Expect = 3.220e-43 Identity = 112/274 (40.88%), Postives = 140/274 (51.09%), Query Frame = 0
Query: 46 VLYMDNQMLCVNKPAGLLSQADRTGDTDVLELAREYVRLATNKPGDAFVALVHRLDRPVSGVMSVARTSKAAARLSASFRTRHGVEKIYHAIVAGKLTGSGTREDLLVSRGGRGALERTDGRGPRTTRALTPRDGGYGDEFSTSDEGNTSPQPDRCQTRPPEAKRAILEWAAIDLPSPGAPTLRCPRSGSPLTLVRVRLVTGRKHQIRVQLAGMGCPVVGDVRYGRFRGEGGTYAGSVPLEDRSILLHASGLVIPHPTRPAETVRVVAPPPKAW 319
VLY+DN +L +NKP+GL SQ DR+G VL L + ++ NKPG+ ++ LVHRLD PVSGVM +ARTSKAAARL FR R VEK+Y A+V G+L GSGT ED + R L P D +G KRA+L W A+ R+G LTL+R+ TGRKHQIRVQLA G P++GD RY R L + LHA L + HPTR E ++ AP P W
Sbjct: 9 VLYLDNHLLVINKPSGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERT-VEKVYLALVEGELEGSGTWEDFMAP--------------ARDHMRLVPEDHPFG-------------------------KRAVLHWQAL-----------MTRNG--LTLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRARRW----------LAPGQMALHAWKLALTHPTR-RERMQWTAPVPPFW 218 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig688.17942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig688.17942.1 ID=prot_F-serratus_M_contig688.17942.1|Name=mRNA_F-serratus_M_contig688.17942.1|organism=Fucus serratus male|type=polypeptide|length=338bpback to top |