prot_F-serratus_M_contig6851.17923.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6851.17923.1
Unique Nameprot_F-serratus_M_contig6851.17923.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length227
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6851.17923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 59..76
NoneNo IPR availableTMHMMTMhelixcoord: 81..98
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6851contigF-serratus_M_contig6851:13377..22619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6851.17923.1mRNA_F-serratus_M_contig6851.17923.1Fucus serratus malemRNAF-serratus_M_contig6851 13256..22971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6851.17923.1 ID=prot_F-serratus_M_contig6851.17923.1|Name=mRNA_F-serratus_M_contig6851.17923.1|organism=Fucus serratus male|type=polypeptide|length=227bp
MALHDGTPDKSSVAGGATSVNASTTPVYYNTSNIAVPPSAGCCAAPGASS
AVLRVRRTAIAIIVFHAIALCALGFIHWAQWIGSLMGIIMASILLCVFNK
CCYIAAAIVFGIGGIFDVIAMIIWILIARAFDNAGEGVEYYSTWGDIASG
LTIPPAVAALTMFLGCAFATMAVISWAQSGASDAPRVVEMPAVSIAGGPG
TATNGANNSHIIPAAAVQRAPPAYSV*
back to top