prot_F-serratus_M_contig6826.17882.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6826.17882.1
Unique Nameprot_F-serratus_M_contig6826.17882.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length315
Homology
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 8.090e-49
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 0
Query:    6 VEEGSATLTSKWVRGPVKSGRVYRYSISSRRKPFVDLLVATSKTKSGGEVHTTGFSAIYQAMAGEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELRPLSEVEEAVSLESNALETAATGD 157
            + E SATL  +W  G VK+G VYR+S S+RRKP+VDLLVA+ K K   EV   GFSAIY+AMAGEPVSCPICM SVVRPTVTKCAHLFCRECI+ +LQ            AKCPICRR+MKG+EMMEL+ LSEVEEA+++++++    ++GD
Sbjct:  974 IGERSATLACEWSEGAVKAGSVYRFSTSTRRKPYVDLLVASDKAKKDTEVQVAGFSAIYKAMAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPALGMIQLPQAKCPICRRTMKGSEMMELQTLSEVEEAMAIDASSAADNSSGD 1125          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A4D9D770_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D770_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.490e-27
Identity = 105/335 (31.34%), Postives = 157/335 (46.87%), Query Frame = 0
Query:    9 GSATLTSKWVRGPVKSGRVYRYSISSRRKPFVDLLVATSKTKSG--GEVHTTGFSAIYQAMAGEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVR--VRG-----TTHSAKCPICRRSMKGTEMMELRPLS-EVEEAVSLE---------------SNALETAATGDGSGGEGNAGGEL-------LAREAQPGEVDAGDKTSATSVCDGRSPPSSVAGASSPSSARFEAESEGGDVLEAAGTTKLIIPTFDMTPTATASQLSSIPMPQLAAGERDPVLPSLETAFLRHFRAAVSAASSVKLDALFQDMNETLGRDPSSKFIIFSQYP 311
            G   L   W     +   V++   ++R+K + DLL+A  K + G   ++H  GF++I+  + G  +SCPIC+ ++  PTVT+C H++C+ CI  Q++E + +  + G          +C +CR+ +    +M L   S E  EA + E               SNA + A +G G GG+GN G  +       L R       D  D+   T V D    P+   G +S       A S       +A    + IP     P A  + L  +P P  A G RD  LPSLE AFL H+R   S   S K+ AL   +  TL  DPS+KF++FSQ+P
Sbjct:  293 GEVRLEGAWACEDQRKALVFKRGPATRKKAYADLLLAKEKEQKGLTDQLHEAGFASIFAVLEGGDLSCPICLCTISEPTVTQCCHVYCQSCILAQIEEAQKQHELHGGYGGLANLVTRCAVCRKPVSQKTLMRLDTSSIERYEAAAEEVDGKVAAGVTRAGAVSNAAD-AESGPGGGGKGNVGESMDVKMPPALPRNRSGNGDDVADRRGETEVVDAH--PAEHGGRASRQCRSAGAPSPSSPSRGSAIRAVMNIPQVGCPPAADEATLQRLPAP-FACG-RDNSLPSLEPAFLAHYRNT-SMVPSAKMQALVGILESTLSSDPSAKFVVFSQFP 621          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A835YV89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV89_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.930e-23
Identity = 51/119 (42.86%), Postives = 81/119 (68.07%), Query Frame = 0
Query:   25 GRVYRYSISSRRKPFVDLLVATSKTK---------SGGEVHTTGFSAIYQAMAGEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELR 134
            G +++++++SR++P+++LL+A+ + K         SGG +HT GF  +Y+AMAG+ V CPIC+ SVVRP VT C H++CRECI  +L    +R+   TH  KCP+CRR +   ++ EL+
Sbjct:  116 GAIWKHAVASRKQPYIELLLASEREKRVTGXXXXXSGG-IHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELD---IRLHQPTHVPKCPLCRRDVNPGDVCELQ 230          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A7S4DH38_HETAK (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH38_HETAK)

HSP 1 Score: 100 bits (249), Expect = 2.280e-21
Identity = 51/121 (42.15%), Postives = 81/121 (66.94%), Query Frame = 0
Query:   27 VYRYSISSRRKPFVDLLVATSKTKSG----GEVHTTGFSAIYQAMA-GEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELR-PLSEVEE 141
            VYR+ +S +++P+++L++A  K  +G    G+VH  GF+ +Y+ MA  + V CP+CM +V RPTVT CAHLFC+EC+   L +   +  G   + KCP+CRR +  +E+ME+  P ++VEE
Sbjct:  101 VYRHGVSKQKEPYMNLIIAQEKEAAGSSHDGDVHEAGFAVLYKLMARADDVHCPVCMGAVSRPTVTPCAHLFCQECLLAVLADHARQ--GGAGAPKCPLCRRDVARSELMEVELPEAQVEE 219          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A6H5JHY1_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.800e-17
Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 0
Query:  229 LIIPTFDMTPTATASQLS-SIPMPQLAAGERDPVLPSLETAFLRHFRAAVSAASSVKLDALFQDMNETLGRDPSSKFIIFSQYPQV 313
            L+IPTF  TPTATA+QLS +IP P +    RD  +PSLE  FL  +RAA S+ SSVKLDAL +D++ TL  DP++KF+IFSQYPQV
Sbjct:  189 LVIPTFRFTPTATAAQLSGAIPPPVMFP--RDNTVPSLEQTFLSQYRAATSSQSSVKLDALVRDLDTTLLHDPTAKFVIFSQYPQV 272          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A1S2Y1J5_CICAR (DNA repair protein RAD5B n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Y1J5_CICAR)

HSP 1 Score: 60.5 bits (145), Expect = 1.970e-6
Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   69 GEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELRPLSEVEEAVSLESNALET 152
            GE V C ICM S   P +T CAH FCREC+            GT+   KCPICR+S+K ++++ L+  S  E  V +E+N  E+
Sbjct:  896 GETVECSICMESPDDPVLTPCAHQFCRECLFNCW--------GTSMGGKCPICRQSLKKSDLVVLQSESPFE--VDIENNLTES 969          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A392NKB0_9FABA (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NKB0_9FABA)

HSP 1 Score: 57.4 bits (137), Expect = 4.000e-6
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 0
Query:   69 GEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELRPLSEVEEAVSLESNALET 152
            GE V C ICM S   P  T CAH FCREC+            GT+   KCPICR+S+K ++++ L   S  +  V +E+N  E+
Sbjct:  115 GETVECSICMESPDDPVFTPCAHQFCRECLFNCW--------GTSMGGKCPICRQSLKKSDLIALPTESPFK--VDIENNLTES 188          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A8C4FDN1_DICLA (Helicase-like transcription factor n=2 Tax=Moronidae TaxID=42148 RepID=A0A8C4FDN1_DICLA)

HSP 1 Score: 57.8 bits (138), Expect = 1.380e-5
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   68 AGEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELRPLSEVEEAVSLESNALET 152
            +G    C +C+ SV  P +T+CAH++CR CIA  +   +V        A+CP+CR  +K +E++E  P  E+EE  S  S    T
Sbjct:  606 SGSDEECSVCLDSVRLPVITRCAHVYCRPCIAQVISNEQVH-------ARCPLCRSEIKTSELVEF-PQDEMEEESSTNSEKWRT 682          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A8C4GTR6_DICLA (Helicase-like transcription factor n=3 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4GTR6_DICLA)

HSP 1 Score: 57.8 bits (138), Expect = 1.400e-5
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   68 AGEPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELRPLSEVEEAVSLESNALET 152
            +G    C +C+ SV  P +T+CAH++CR CIA  +   +V        A+CP+CR  +K +E++E  P  E+EE  S  S    T
Sbjct:  651 SGSDEECSVCLDSVRLPVITRCAHVYCRPCIAQVISNEQVH-------ARCPLCRSEIKTSELVEF-PQDEMEEESSTNSEKWRT 727          
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Match: A0A7S2A257_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A257_TRICV)

HSP 1 Score: 55.5 bits (132), Expect = 2.230e-5
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   70 EPVSCPICMYSVVRPTVTKCAHLFCRECIATQLQEGRVRVRGTTHSAKCPICRRSMKGTEM 130
            + + CPIC+  +  P ++KC H+FCRECI     EG + + G+  S  CPICR+++K  E+
Sbjct:   42 DDLDCPICLQQLDNPCISKCKHIFCRECI-----EGTLMMHGS--SGPCPICRKNIKDKEL 95          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6826.17882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G2K8_ECTSI8.090e-4961.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D770_9STRA1.490e-2731.34Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835YV89_9STRA2.930e-2342.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DH38_HETAK2.280e-2142.15RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A6H5JHY1_9PHAE2.800e-1760.47Helicase C-terminal domain-containing protein n=1 ... [more]
A0A1S2Y1J5_CICAR1.970e-641.67DNA repair protein RAD5B n=1 Tax=Cicer arietinum T... [more]
A0A392NKB0_9FABA4.000e-640.48SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A8C4FDN1_DICLA1.380e-536.47Helicase-like transcription factor n=2 Tax=Moronid... [more]
A0A8C4GTR6_DICLA1.400e-536.47Helicase-like transcription factor n=3 Tax=Dicentr... [more]
A0A7S2A257_TRICV2.230e-540.98Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 74..121
e-value: 1.7E-8
score: 44.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 74..122
score: 12.312
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 74..103
e-value: 2.6E-8
score: 33.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 57..156
e-value: 6.8E-15
score: 56.6
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 63..312
NoneNo IPR availablePANTHERPTHR45626:SF17HELICASE-LIKE TRANSCRIPTION FACTORcoord: 63..312
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 64..125
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 89..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6826contigF-serratus_M_contig6826:17290..23723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6826.17882.1mRNA_F-serratus_M_contig6826.17882.1Fucus serratus malemRNAF-serratus_M_contig6826 17290..23723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6826.17882.1 ID=prot_F-serratus_M_contig6826.17882.1|Name=mRNA_F-serratus_M_contig6826.17882.1|organism=Fucus serratus male|type=polypeptide|length=315bp
MDEQAVEEGSATLTSKWVRGPVKSGRVYRYSISSRRKPFVDLLVATSKTK
SGGEVHTTGFSAIYQAMAGEPVSCPICMYSVVRPTVTKCAHLFCRECIAT
QLQEGRVRVRGTTHSAKCPICRRSMKGTEMMELRPLSEVEEAVSLESNAL
ETAATGDGSGGEGNAGGELLAREAQPGEVDAGDKTSATSVCDGRSPPSSV
AGASSPSSARFEAESEGGDVLEAAGTTKLIIPTFDMTPTATASQLSSIPM
PQLAAGERDPVLPSLETAFLRHFRAAVSAASSVKLDALFQDMNETLGRDP
SSKFIIFSQYPQVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR027370Znf-RING_LisH
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS