prot_F-serratus_M_contig680.17864.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig680.17864.1
Unique Nameprot_F-serratus_M_contig680.17864.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length574
Homology
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BLAST of mRNA_F-serratus_M_contig680.17864.1 vs. uniprot
Match: A0A6H5KSF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF2_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 7.790e-64
Identity = 121/255 (47.45%), Postives = 152/255 (59.61%), Query Frame = 0 
Query:  122 AEGEELEWAGGVPVSSRFTL------GGVELSAVDSLCGEVGSTT---LVVASSDGVVRTLVGPIQRNCGRFAELHEDTIFSIYELLGYRSSQVLGYVNRTMAVIRAKLRLEWRLFPLTQGYLAKIKLEFLRWGRSSAGQGLPGRGTAVDASGVRLCNDFLTTSKCSRPACPYSHEQPWIQNDVLQDDDACILFRGGVTHALNDLHGQVFVWEWEGDLYRLFCERSMSKTLVNRRDPLTLGMYGAEVIRECVEEE 367
            A G  ++W  G PVS+RF        G  ++   D  C   G  T   +VV +SDG+VR L GP  R+CG F  L ED + SI ELLGYRSSQVLG+VN TMA +R++LR EWRL PLT G+LAK  LEFL+WGR   G                                         +N+     DACI+FRGGVTHA+N+L+GQVF WEWEG+LYRLF ERS+ +T+V RRDP+TLG++GAEV+R+CV  E
Sbjct:   64 ANGGAMDWGTGTPVSARFARLKTVDRGSGQIPVSDDECPHAGLVTTASIVVGASDGIVRFLGGPKMRHCGSFVSLSEDDVLSILELLGYRSSQVLGHVNHTMADLRSRLRREWRLHPLTPGHLAKRTLEFLQWGRIGPGS----------------------------------------KNNA----DACIVFRGGVTHAVNNLYGQVFGWEWEGELYRLFRERSLLRTIVTRRDPMTLGIHGAEVVRDCVVSE 274
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BLAST of mRNA_F-serratus_M_contig680.17864.1 vs. uniprot
Match: D7G5H9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H9_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.190e-63
Identity = 121/256 (47.27%), Postives = 156/256 (60.94%), Query Frame = 0 
Query:  122 AEGEELEWAGGVPVSSRFTLGGVELSAVDSLCGE-------------VGSTTLVVASSDGVVRTLVGPIQRNCGRFAELHEDTIFSIYELLGYRSSQVLGYVNRTMAVIRAKLRLEWRLFPLTQGYLAKIKLEFLRWGRSSAGQGLPGRGTAVDASGVRLCNDFLTTSKCSRPACPYSHEQPWIQNDVLQDDDACILFRGGVTHALNDLHGQVFVWEWEGDLYRLFCERSMSKTLVNRRDPLTLGMYGAEVIRECV 364
            A+G  ++W  G PVS+RF      L AVD   G+             V +T++VV +SDG+VR L GP  R+CG F  L ED + SI ELLGYRSSQVLG+VN TMA +R++LR EWRL PLT G+LAK  LEFL+WGR             +D                           P  +N+     DACI+FRGGVTHA+N+L+GQ+F WEWEG+LYRLF ERS+ +++V RRDP+TLG+ GAEV+R+CV
Sbjct:   33 ADGGAMDWGTGTPVSARFA----RLKAVDRGSGQIPVSDDESPHAGLVTTTSIVVGTSDGIVRFLGGPKMRHCGSFVSLSEDDVLSILELLGYRSSQVLGHVNHTMANLRSRLRREWRLHPLTPGHLAKRTLEFLQWGR-------------ID---------------------------PGSKNNA----DACIVFRGGVTHAVNNLYGQIFGWEWEGELYRLFRERSLLRSVVTRRDPMTLGIQGAEVVRDCV 240
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig680.17864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSF2_9PHAE7.790e-6447.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5H9_ECTSI3.190e-6347.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 263..290
score: 11.084

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig680contigF-serratus_M_contig680:366637..370165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig680.17864.1mRNA_F-serratus_M_contig680.17864.1Fucus serratus malemRNAF-serratus_M_contig680 365797..370257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig680.17864.1 ID=prot_F-serratus_M_contig680.17864.1|Name=mRNA_F-serratus_M_contig680.17864.1|organism=Fucus serratus male|type=polypeptide|length=574bp
MGSEKCPNTIQCNSEPAALCCIGPGRSSLCYDPPLTHHSIEGLLRPCSVS
FNREGDLVVADDGAKKVIVYGHLSGRWVRVHDFGPTHVGGTKFEICTTTL
RERRRWASAETVQKRDPRRQTAEGEELEWAGGVPVSSRFTLGGVELSAVD
SLCGEVGSTTLVVASSDGVVRTLVGPIQRNCGRFAELHEDTIFSIYELLG
YRSSQVLGYVNRTMAVIRAKLRLEWRLFPLTQGYLAKIKLEFLRWGRSSA
GQGLPGRGTAVDASGVRLCNDFLTTSKCSRPACPYSHEQPWIQNDVLQDD
DACILFRGGVTHALNDLHGQVFVWEWEGDLYRLFCERSMSKTLVNRRDPL
TLGMYGAEVIRECVEEEQQVLGYSGFIDFVTVIHEHVTGLRSWNRRSAAF
PTTSISETMQQARKGIVTLSSPRGGGFVSPHERAPPRPTQLGNDVDGLVK
KRIDAVTCVVKSTKRDIDDKEEGLMLYEARESARSPSGFCLIDPVTPWLS
WDSARRNIDGSPTTVPYSLCDEHARFGRKDAEEDEEAKVNRTYGSNEDER
AVSLNRIVAFQTDRVIRVLDRLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH