prot_F-serratus_M_contig68.17835.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig68.17835.1
Unique Nameprot_F-serratus_M_contig68.17835.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length81
Homology
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BLAST of mRNA_F-serratus_M_contig68.17835.1 vs. uniprot
Match: D8LJY4_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY4_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 5.210e-19
Identity = 49/75 (65.33%), Postives = 57/75 (76.00%), Query Frame = 0 
Query:   16 RPSPLMSPLRPRDR----QAFDTDNE-----ARYVVTVRSAKNLKRQGFRGLTNPYCKLNVGRQGPFTTDVVYDS 81
            RPSP  S   PR R    +  D+DN+     ARY V+VRSAKNLKR+GFRGLTNPYC+LNVGRQGP+TTDVV+DS
Sbjct:   11 RPSPSTSKS-PRRRGLAAEFVDSDNDEASCCARYHVSVRSAKNLKREGFRGLTNPYCQLNVGRQGPYTTDVVFDS 84
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig68.17835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJY4_ECTSI5.210e-1965.33C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 20..81
e-value: 3.4E-6
score: 28.8
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 41..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig68contigF-serratus_M_contig68:589901..591308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig68.17835.1mRNA_F-serratus_M_contig68.17835.1Fucus serratus malemRNAF-serratus_M_contig68 589901..591417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig68.17835.1 ID=prot_F-serratus_M_contig68.17835.1|Name=mRNA_F-serratus_M_contig68.17835.1|organism=Fucus serratus male|type=polypeptide|length=81bp
MGRMPMDSPKLNRARRPSPLMSPLRPRDRQAFDTDNEARYVVTVRSAKNL
KRQGFRGLTNPYCKLNVGRQGPFTTDVVYDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf