prot_F-serratus_M_contig679.17804.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig679.17804.1
Unique Nameprot_F-serratus_M_contig679.17804.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length216
Homology
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BLAST of mRNA_F-serratus_M_contig679.17804.1 vs. uniprot
Match: D7FMG4_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG4_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.260e-48
Identity = 105/207 (50.72%), Postives = 120/207 (57.97%), Query Frame = 0 
Query:   41 SHVSKGGRFPDTSGKLGEPT--WPGDGPGCLALVPYR--PRRSSACPPLTCPRRNPVPLVPPP-------------------------PSRKKAAGK---IPVEVFPIVFQYMDAATLCSVSGVSREWLKQSNDDRYWRRLCQASFNVTPDAFAPPPDPIKRLYQLQYGSLKAMYRGCSP--AHNGTLPAVSAATSTRLLLGLMASN 213
            SH+SKGGRF D   + G      P  GPGC ALVPY   P RS     L  P   P+  +PP                           S K  A +   IP+EVFPI FQYMDA TLC+VS VSREW KQ NDD+YWR LC+A FNV PDAFAPPPDPIKRLYQLQ+GS KAM RG      H+G  P +   TS +LL+GL+ASN
Sbjct:   59 SHISKGGRFSDRGEREGTSIVLLPEAGPGCRALVPYTASPARSR----LPLPAHPPLLALPPSLGCDAPSLYSSCSLSSCNSSSSSPNGSFKGGAARRVDIPLEVFPIAFQYMDALTLCTVSSVSREWKKQGNDDQYWRHLCRARFNVIPDAFAPPPDPIKRLYQLQHGSFKAMCRGDRRHGLHSGAPPVIPRHTSAQLLVGLLASN 261
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig679.17804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMG4_ECTSI1.260e-4850.72F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 98..185
e-value: 3.1E-10
score: 41.9
IPR001810F-box domainPFAMPF12937F-box-likecoord: 108..151
e-value: 1.9E-6
score: 27.7
IPR001810F-box domainPROSITEPS50181FBOXcoord: 103..149
score: 10.584
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 105..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig679contigF-serratus_M_contig679:276341..278675 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig679.17804.1mRNA_F-serratus_M_contig679.17804.1Fucus serratus malemRNAF-serratus_M_contig679 275011..281753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig679.17804.1 ID=prot_F-serratus_M_contig679.17804.1|Name=mRNA_F-serratus_M_contig679.17804.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MAESSHWEGSSFAGVEKRAHPPASEEGESDEATAIGFLEASHVSKGGRFP
DTSGKLGEPTWPGDGPGCLALVPYRPRRSSACPPLTCPRRNPVPLVPPPP
SRKKAAGKIPVEVFPIVFQYMDAATLCSVSGVSREWLKQSNDDRYWRRLC
QASFNVTPDAFAPPPDPIKRLYQLQYGSLKAMYRGCSPAHNGTLPAVSAA
TSTRLLLGLMASNAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR036047F-box-like_dom_sf