prot_F-serratus_M_contig6756.17779.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6756.17779.1
Unique Name	prot_F-serratus_M_contig6756.17779.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	115

Homology

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BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.640e-67
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKKSAK PKKAGDKK+ NKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    5 PSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

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BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.090e-60
Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKKSAK PKKAGDK K  KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   19 PSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

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BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.050e-60
Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGD-KKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKK+AK PKKA D KKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    5 PSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

[Close]

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.370e-58
Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGD-KKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKK+AK PKKA D KKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  138 PSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250

[Close]

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 182 bits (462), Expect = 1.420e-57
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKK+AK PKKAG K+  NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    5 PSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114

[Close]

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.370e-57
Identity = 96/114 (84.21%), Postives = 105/114 (92.11%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANK--RTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKKSAK PKK G+K K  K  R ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    5 PSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

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BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 181 bits (459), Expect = 4.340e-57
Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSK+SAK PKKA    K+ KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    5 PSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

[Close]

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.700e-55
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            PSKK+A  PKKAG K+ + KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   12 PSKKAA-APKKAGGKR-SRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121

[Close]

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A6G0XRP0_9STRA (Histone H2B n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRP0_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.330e-55
Identity = 91/114 (79.82%), Postives = 105/114 (92.11%), Query Frame = 0

Query:    3 PSKKSAKVPKKAGDKKKANK--RTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 114
            P+KK+AK PKK+G++KK+ K  R ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+  E+ KL+RYNKK TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTK+TSS
Sbjct:    6 PNKKTAKAPKKSGNEKKSRKTRRVESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIGAEASKLSRYNKKMTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKYTSS 119

[Close]

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Match: A0A835YLA9_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA9_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.160e-55
Identity = 94/113 (83.19%), Postives = 103/113 (91.15%), Query Frame = 0

Query:    2 RPSKKSAKVPKKAGD-KKKANKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 113
            R SKK+AK PKKA + KK+  KR ESYSSYIYKVLKQVHPDTGISKRGMS+MNSFINDVFER+A E+G+LTRYN + TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS
Sbjct:   26 RSSKKAAKAPKKAVEGKKRRPKRVESYSSYIYKVLKQVHPDTGISKRGMSVMNSFINDVFERIASEAGRLTRYNNRQTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 138

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6756.17779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	2.640e-67	97.32	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	1.090e-60	87.50	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	2.050e-60	89.38	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A836CJT3_9STRA	1.370e-58	89.38	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
H2B_OLILU	1.420e-57	83.93	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
A0A485K2U0_9STRA	2.370e-57	84.21	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
B7FWR8_PHATC	4.340e-57	83.93	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A6U6DWX5_9STRA	1.700e-55	83.93	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
A0A6G0XRP0_9STRA	3.330e-55	79.82	Histone H2B n=1 Tax=Aphanomyces euteiches TaxID=10...	[more]
A0A835YLA9_9STRA	4.160e-55	83.19	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 27..45 score: 84.56 coord: 46..66 score: 67.66 coord: 98..111 score: 92.65 coord: 68..85 score: 56.83 coord: 85..98 score: 90.61
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 17..113 e-value: 2.1E-69 score: 246.5
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 4..114
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 82..104
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..114 e-value: 1.9E-56 score: 191.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..114
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 7..90 e-value: 1.4E-17 score: 64.2
None	No IPR available	PANTHER	PTHR23428:SF196	HISTONE H2B TYPE 1-N	coord: 4..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6756	contig	F-serratus_M_contig6756:27020..27364 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6756.17779.1	mRNA_F-serratus_M_contig6756.17779.1	Fucus serratus male	mRNA	F-serratus_M_contig6756 27020..27364 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6756.17779.1 ID=prot_F-serratus_M_contig6756.17779.1|Name=mRNA_F-serratus_M_contig6756.17779.1|organism=Fucus serratus male|type=polypeptide|length=115bp
PRPSKKSAKVPKKAGDKKKANKRTESYSSYIYKVLKQVHPDTGISKRGMS
IMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHA
VSEGTKAVTKFTSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3