prot_F-serratus_M_contig6751.17773.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6751.17773.1
Unique Nameprot_F-serratus_M_contig6751.17773.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length152
Homology
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.370e-21
Identity = 64/146 (43.84%), Postives = 80/146 (54.79%), Query Frame = 0
Query:    6 VIVTSVHCPNSSLACSQLAYFARDSVSRIPGDLLVLGFDCEWAASLTG-RRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVLVCKHLGVPVGERSLARLAA 150
            V V S +C  SS  C QL   AR S         VLGFD EW+   +G RR+VA++Q+ + DGYT +F +K         GI+P ALKELL N+ I+LAGV  + D   L   Y V GT  +D+G L   HL V  G RSL  L A
Sbjct:   92 VRVASENCELSSRICLQLLRRARASAPA------VLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEER---RRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTA 228          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A7R9ETC7_9NEOP (Hypothetical protein n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9ETC7_9NEOP)

HSP 1 Score: 67.4 bits (163), Expect = 3.340e-10
Identity = 42/110 (38.18%), Postives = 55/110 (50.00%), Query Frame = 0
Query:   38 LLVLGFDCEWAASLTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVLVCKHLGVPVGERSLAR 147
            L  LGFDCEW      RR VA++Q+ SLDG  A++R+        +   +P  LKELLE+  I   GV    D   L  DY V+  G +D+  L   H     G  SLA+
Sbjct:   75 LSALGFDCEWVTERGSRRPVALLQLASLDGLCALYRL-------CKVHYIPTQLKELLEDPSILKVGVAPSDDAKYLLADYGVKVRGCLDLRHLAKLHGNSTGGLGSLAQ 177          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A0S6XA33_BLOB1 (3'-5' exonuclease domain-containing protein n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0S6XA33_BLOB1)

HSP 1 Score: 60.8 bits (146), Expect = 6.750e-8
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0
Query:   20 CSQLAYFARDSVSRIPGDLLVLGFDCEWAASLTGRRK-----VAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVL 131
            C+ L   A ++V+R   +  VLGFD EW +     R      V+VIQ+ S D          RG +  +  +MP AL+E+LE++ I+ AGV    D  RL+  + +EG G  ++  L
Sbjct:  800 CTNLV--AAENVARSFAEENVLGFDMEWESGAQPTRSAIKDNVSVIQLASEDRVAIFHLALFRGDTAQD--LMPTALREILESQSIRKAGVNVAGDFTRLRKCFSIEGKGLFELSHL 912          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A8D0DZ88_9SAUR (DNA helicase n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0DZ88_9SAUR)

HSP 1 Score: 59.3 bits (142), Expect = 2.350e-7
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 0
Query:   21 SQLAYFARDSVSRIPGDLLVLGFDCEWAA--SLTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVLVCKHL 136
            S  +  + D VS +P +  VLGFD EW    S    +KVA+IQ+   +    +F + S  S        P  LK LLE++ IK AGVG + D  +L  D++V+  G +D+  L  + L
Sbjct:   54 SDTSLLSEDIVSTLP-EGAVLGFDIEWPPCYSKGKEKKVALIQLCESEKKCYLFHISSMSS-------FPLGLKRLLEDDNIKKAGVGIEGDKWKLMRDFEVKLEGLVDLADLANEKL 163          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A5E4QET7_9NEOP (3'-5' exonuclease domain-containing protein n=1 Tax=Leptidea sinapis TaxID=189913 RepID=A0A5E4QET7_9NEOP)

HSP 1 Score: 58.5 bits (140), Expect = 3.900e-7
Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   41 LGFDCEWAASLTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVG--VLVCKHLGVPVGERSLA 146
            LGFDCEW    + R+ V+++Q+ +LDGY  +FR+        +   +P ALK LLE+E I   GV    D   L  DY V     +D+   V +C +  +P G  +L+
Sbjct:   71 LGFDCEWVTKGSKRQPVSLLQLSTLDGYCGLFRL-------CKMKCIPEALKALLEDENIFKLGVVPADDAKYLANDYGVCVKSTLDIRHFVELCGY--IPSGLATLS 169          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A1J1HU97_9DIPT (CLUMA_CG004817, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1HU97_9DIPT)

HSP 1 Score: 57.8 bits (138), Expect = 7.730e-7
Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = 0
Query:   37 DLLVLGFDCEWAASLTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVL 131
            D  V+GFDCEW      RRK+A+IQ+ S+ G+ A+FRV       S+   +P  L+ +LE+  I   G+  + D   L  DY +   G  D+  L
Sbjct:   79 DFPVVGFDCEWVTVNNQRRKIALIQLCSIKGFCALFRV-------SKFSNIPIELRNILEDPTIIKTGITPEHDANYLFQDYAIMMKGTFDLRFL 166          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A8C5V198_MICMU (DNA helicase n=8 Tax=Lemuriformes TaxID=376915 RepID=A0A8C5V198_MICMU)

HSP 1 Score: 56.6 bits (135), Expect = 2.010e-6
Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 0
Query:   17 SLACSQLAYFARD-SVSRIPGDLLVLGFDCEWAASLTGRR--KVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVE 121
            S   S  ++ + D S S   GD  V+GFD EW       +  ++A+IQ+   +    +F V       S A + P  LK LLENE IK AGVG + D  +L  D+D++
Sbjct:   57 SYEASDCSFLSEDISTSLSDGD--VVGFDLEWPPVYNKGKLGRIALIQLCVSESKCYLFHV-------SAASVFPQGLKNLLENEAIKKAGVGIEGDQWKLLRDFDIK 155          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A2K6ES62_PROCO (DNA helicase n=2 Tax=Propithecus coquereli TaxID=379532 RepID=A0A2K6ES62_PROCO)

HSP 1 Score: 55.5 bits (132), Expect = 4.940e-6
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = 0
Query:   30 SVSRIPGDLLVLGFDCEWAASLTGRR--KVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVE 121
            S+S   GD  V+GFD EW      R+  KVA+IQ+   +    +F +       S   + P  LK LLENE IK AGVG + D  +L  D++++
Sbjct:   71 SMSLSDGD--VVGFDMEWPPVYNKRKLGKVALIQLCVSESKCYLFHI-------SAMSVFPQGLKNLLENEAIKKAGVGIEGDQWKLLRDFEIK 155          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A1B0BNC6_9MUSC (Uncharacterized protein n=1 Tax=Glossina palpalis gambiensis TaxID=67801 RepID=A0A1B0BNC6_9MUSC)

HSP 1 Score: 53.5 bits (127), Expect = 2.290e-5
Identity = 28/95 (29.47%), Postives = 52/95 (54.74%), Query Frame = 0
Query:   37 DLLVLGFDCEWAASLTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVL 131
            D +VLGFDC+W    +G + VA++Q+ ++ G+ A+FR+            +P++LK LL+++ I   GV       +L   Y ++   ++D+  L
Sbjct:  613 DYVVLGFDCQWITGNSGHKLVALLQLATVKGFCAVFRLPYMQP-------IPHSLKNLLKDKNILKVGVDCVQKAQQLTQTYGIKVASSLDLRYL 700          
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Match: A0A1A9XU87_GLOFF (3'-5' exonuclease domain-containing protein n=3 Tax=Glossina TaxID=7393 RepID=A0A1A9XU87_GLOFF)

HSP 1 Score: 52.8 bits (125), Expect = 3.810e-5
Identity = 28/95 (29.47%), Postives = 51/95 (53.68%), Query Frame = 0
Query:   37 DLLVLGFDCEWAASLTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEIKLAGVGGKADHCRLKTDYDVEGTGAMDVGVL 131
            D +VLGFDC+W     G + VA++Q+ ++ G+ A+FR+            +P++LK LL+++ I   GV       +L   Y ++   ++D+  L
Sbjct:   58 DYVVLGFDCQWITGNNGHKLVALLQLATVKGFCAVFRLPYMQP-------IPHSLKNLLKDKNIIKVGVDCVQKAQQLTQTYGIKVASSLDLRYL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6751.17773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G0J2_ECTSI2.370e-2143.843'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A7R9ETC7_9NEOP3.340e-1038.18Hypothetical protein n=1 Tax=Timema bartmani TaxID... [more]
A0A0S6XA33_BLOB16.750e-833.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8D0DZ88_9SAUR2.350e-734.75DNA helicase n=1 Tax=Salvator merianae TaxID=96440... [more]
A0A5E4QET7_9NEOP3.900e-735.193'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A1J1HU97_9DIPT7.730e-735.79CLUMA_CG004817, isoform A n=1 Tax=Clunio marinus T... [more]
A0A8C5V198_MICMU2.010e-635.19DNA helicase n=8 Tax=Lemuriformes TaxID=376915 Rep... [more]
A0A2K6ES62_PROCO4.940e-637.23DNA helicase n=2 Tax=Propithecus coquereli TaxID=3... [more]
A0A1B0BNC6_9MUSC2.290e-529.47Uncharacterized protein n=1 Tax=Glossina palpalis ... [more]
A0A1A9XU87_GLOFF3.810e-529.473'-5' exonuclease domain-containing protein n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 40..150
e-value: 4.5E-6
score: 26.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 7..151
e-value: 2.1E-15
score: 58.4
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 19..149
NoneNo IPR availablePANTHERPTHR13620:SF45WERNER SYNDROME-LIKE EXONUCLEASEcoord: 19..149
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 31..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6751contigF-serratus_M_contig6751:18300..18950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6751.17773.1mRNA_F-serratus_M_contig6751.17773.1Fucus serratus malemRNAF-serratus_M_contig6751 17418..19834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6751.17773.1 ID=prot_F-serratus_M_contig6751.17773.1|Name=mRNA_F-serratus_M_contig6751.17773.1|organism=Fucus serratus male|type=polypeptide|length=152bp
MVSKPVIVTSVHCPNSSLACSQLAYFARDSVSRIPGDLLVLGFDCEWAAS
LTGRRKVAVIQMPSLDGYTAIFRVKSRGSSGSEAGIMPNALKELLENEEI
KLAGVGGKADHCRLKTDYDVEGTGAMDVGVLVCKHLGVPVGERSLARLAA
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf