prot_F-serratus_M_contig6704.17737.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6704.17737.1
Unique Nameprot_F-serratus_M_contig6704.17737.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length89
Homology
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: D7FMN3_ECTSI (Ribosome biogenesis regulatory protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN3_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 2.450e-35
Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 0
Query:    2 KRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVMIGKSKSADKEGAARNSKASLAA 89
            KRGK  TKGALE+VQ STASMGKFDERR AEPERRK KGVRRAFKPVTV SG+ET+ H+KILNSVMIGKSKSADK+G AR++K SLAA
Sbjct:  223 KRGKANTKGALELVQHSTASMGKFDERRHAEPERRKGKGVRRAFKPVTVGSGEETQGHLKILNSVMIGKSKSADKDGTARSAKESLAA 310          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A7S2UUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.870e-8
Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    1 MKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGD-ETKSHIKILNSVMIGKSKSADKEGAARNSKASLA 88
            +KRG+  T+  L +VQ STASMGKFDE R  EPE++  +G RR F+P+  A    E+++ +K + ++++ K KS  K   +  SK+ LA
Sbjct:  385 LKRGRDKTEKTLRLVQNSTASMGKFDEVRQGEPEKKARQGKRRKFQPLLSAQPKAESQAQLKTVQAILVNKGKS--KSQVSHQSKSDLA 471          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A485KFR7_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFR7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.450e-6
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVM-----IGKSKSA 74
            RGK GTK AL+ VQ STASMGKFD++R  E ER KH G R  F  VT A   E +  + +L  V+      GK+KSA
Sbjct:  220 RGKEGTKAALQKVQFSTASMGKFDKKREGEGER-KHVGKRNKFLSVTGAEKTEKERSMNVLQHVLGREENKGKAKSA 295          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A1V9ZCQ0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCQ0_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.970e-6
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVM 67
            RGK GTK AL+ VQ STASMGKFD+ R  E ER K KG R  F  VT +   E +  + +LN V+
Sbjct:  220 RGKEGTKAALQKVQFSTASMGKFDKMRQGEAER-KQKGKRNKFLSVTGSEQTEKERSMSVLNHVL 283          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A1V9ZJR0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJR0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 5.100e-6
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVM 67
            RGK GTK AL+ VQ STASMGKFD+ R  E ER K  G R  F  VT A   E +  + +LN V+
Sbjct:  223 RGKEGTKAALQKVQFSTASMGKFDKMRTGEAER-KQTGKRNKFLSVTGAEKTEKERSMSVLNHVL 286          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A067CPT1_SAPPC (Ribosome biogenesis regulatory protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPT1_SAPPC)

HSP 1 Score: 52.4 bits (124), Expect = 6.960e-6
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVM 67
            RGK GTK AL+ VQ STASMGKFD+ R  E ER K  G R  F  VT A   E +  + +LN V+
Sbjct:  221 RGKEGTKAALQKVQFSTASMGKFDKMRTGEAER-KQTGKRNKFLSVTGAEKTEKERSMHVLNHVL 284          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A024TRU1_9STRA (Ribosome biogenesis regulatory protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TRU1_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 7.020e-6
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVMIGKSKSADKEGAARNS 83
            RGK GTK AL+ VQ STASMGKFD++R  E ER KH G R  F  VT +   E +  + +L   ++G+ ++  K  AA +S
Sbjct:  220 RGKEGTKAALQKVQFSTASMGKFDKKREGEGER-KHVGKRNKFLSVTGSEKTEKERSMNVLQH-LLGREENKGKAKAASHS 298          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A6G0WAM1_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAM1_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.790e-5
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVM 67
            RGK GTK AL+ VQ STASMGKFD++R  E ER K  G R  F  VT A   E +  + +L  V+
Sbjct:  221 RGKEGTKAALQKVQFSTASMGKFDKKREGEGER-KQTGKRNKFLSVTGAEKTEKERSMNVLQHVL 284          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A482SZL4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZL4_9ARCH)

HSP 1 Score: 48.9 bits (115), Expect = 3.000e-5
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 KRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDET---KSHIKILNSVMIGKSK 72
            KRGK G + AL++ Q STASMG+FDE RP EPER K  G +R+++    +   ET   KS ++I+    + K++
Sbjct:   21 KRGKGGVRKALQLAQFSTASMGRFDEMRPGEPER-KITGKKRSYRDNLSSIQSETSLMKSQLRIVEDKAVKKAR 93          
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Match: A0A484DXV0_BRELC (Ribosome biogenesis regulatory protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXV0_BRELC)

HSP 1 Score: 50.4 bits (119), Expect = 3.340e-5
Identity = 37/75 (49.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    3 RGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTVASGDETKSHIKILNSVMIGKSKSADKE 77
            RGK GT  ALE VQ STASMGKFD  R  E ER K KG R  F P T A   E +  +  L  V+ G+ ++A K+
Sbjct:  215 RGKEGTSQALEKVQFSTASMGKFDAMRQGETER-KVKGKRNHFLPTTGAEATERERSLNALKRVL-GREENAGKK 287          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6704.17737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FMN3_ECTSI2.450e-3581.82Ribosome biogenesis regulatory protein n=2 Tax=Ect... [more]
A0A7S2UUR0_9STRA6.870e-841.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485KFR7_9STRA1.450e-650.65Ribosome biogenesis regulatory protein n=1 Tax=Aph... [more]
A0A1V9ZCQ0_9STRA1.970e-652.31Ribosome biogenesis regulatory protein n=1 Tax=Thr... [more]
A0A1V9ZJR0_9STRA5.100e-652.31Ribosome biogenesis regulatory protein n=1 Tax=Ach... [more]
A0A067CPT1_SAPPC6.960e-652.31Ribosome biogenesis regulatory protein n=2 Tax=Sap... [more]
A0A024TRU1_9STRA7.020e-645.68Ribosome biogenesis regulatory protein n=5 Tax=Aph... [more]
A0A6G0WAM1_9STRA1.790e-550.77Ribosome biogenesis regulatory protein n=1 Tax=Aph... [more]
A0A482SZL4_9ARCH3.000e-543.24Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A484DXV0_BRELC3.340e-549.33Ribosome biogenesis regulatory protein n=1 Tax=Bre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6704contigF-serratus_M_contig6704:884..2635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6704.17737.1mRNA_F-serratus_M_contig6704.17737.1Fucus serratus malemRNAF-serratus_M_contig6704 856..2635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6704.17737.1 ID=prot_F-serratus_M_contig6704.17737.1|Name=mRNA_F-serratus_M_contig6704.17737.1|organism=Fucus serratus male|type=polypeptide|length=89bp
MKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRKHKGVRRAFKPVTV
ASGDETKSHIKILNSVMIGKSKSADKEGAARNSKASLAA
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