prot_F-serratus_M_contig670.17736.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig670.17736.1
Unique Nameprot_F-serratus_M_contig670.17736.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length476
Homology
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: D7FVK1_ECTSI (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK1_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.220e-61
Identity = 100/147 (68.03%), Postives = 120/147 (81.63%), Query Frame = 0
Query:  155 GRNRKRPKDDRPALAETLCVHVSHGNECRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACNRKGWPAFLSSLDSDFSKPWSREMPPTS 300
            GRN+KRPKDDRPA A+TLC H+S G  C +G  CRF+HDVKAYLEKK PDI++TCPIWD RG CPSGLKCRFG AHTD +TLKP+ + G   PS F ++NDLSRDLQ KLRRNQ+PFAC+R GWPAFL+SLD D++ P + + PP+S
Sbjct:   54 GRNKKRPKDDRPAQADTLCQHLSDGRPCTYGERCRFAHDVKAYLEKKPPDIAETCPIWDARGSCPSGLKCRFGGAHTDLETLKPVVREGGPAPSSFNYINDLSRDLQGKLRRNQVPFACDRNGWPAFLASLDKDYA-PQASQQPPSS 199          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: A0A7S1CR92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR92_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.940e-20
Identity = 62/198 (31.31%), Postives = 87/198 (43.94%), Query Frame = 0
Query:   84 GWAPIKPEFIRSREELLALEKASKPDNGRTHGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEEFKKGKRGRNRKRPKDDRPALAET----------LCVHVSHGNECRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPF 270
            G+ P+KPE++ + E L AL    +                                      A E  +  +G+N+KR   D   LA T          LC  V+ G EC FG  C++SHD+K YLE K PD++  C ++D  G CP+G  CRFG +H D   +    +  A    +   MNDLS D++  LRR Q  F
Sbjct:   19 GFCPVKPEYLVTGEALTALFAQIRAAQA---------------------------------AAAEAGEATKGQNKKRSMAD-VGLAATATSSRVPGKGLCRRVAQGGECPFGDGCKWSHDIKEYLESKPPDLAPRCLMFDATGACPAGFCCRFGDSHIDRDAVALTFRPEAERTPLPAEMNDLSDDVKRALRRRQYEF 182          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: A0A7S2RFF3_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFF3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.300e-18
Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = 0
Query:  154 RGRNRKRPKDDRPALAETLCVHV-SHG-NECRFGSS-CRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDPKT---LKPITKTGAADPSI-FEHMNDLSRDLQAKLRRNQMPFACNRK 275
            +GRN+KRP+D+RP  A+ LC  V S G   C FG+  CRFSHD+ ++L  +  D+   CP++   G C  GL CRFGS H DP T   L  + + G  +P +  E    L +++Q +LR+N  PF C R+
Sbjct:   74 KGRNKKRPRDERPKPADQLCRAVASRGPTACPFGAEKCRFSHDLASFLATRPEDLGPECPVFKQFGRCNFGLLCRFGSCHIDPTTGANLPLLEEAGIREPGLGSERTALLPKNVQIQLRKNTFPFKCPRR 203          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: UPI00096B6380 (tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B6380)

HSP 1 Score: 93.6 bits (231), Expect = 5.130e-17
Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 0
Query:  151 KGKRGRNRKRPKDDRPALAETLCVHVSHGNE--CRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACNRKGWPAFLSSLD 285
            K +RG+N+ RP   R   ++ LC    H  +  CRFG  CR+SHDVK YLE K PDISD C ++   G CPSG+ CRFGS+H   +    I K+   +  I    N + + LQ  LR+ ++ F  + +    +L SL+
Sbjct:   47 KKRRGQNKHRP-PTRLDFSQQLCPSF-HAKDYTCRFGDKCRYSHDVKGYLESKPPDISDKCYMYTTYGMCPSGIACRFGSSHISAEGENIINKSLYDEKRIKSVSNVIEKSLQIALRKKKVSFPRSEE----YLKSLE 178          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: A0A1X7TCR8_AMPQE (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TCR8_AMPQE)

HSP 1 Score: 93.6 bits (231), Expect = 1.370e-16
Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 0
Query:  151 KGKRGRNRKRPKDDRPALAETLCVHVSHGNE--CRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACNRKGWPAFLSSLD 285
            K +RG+N+ RP   R   ++ LC    H  +  CRFG  CR+SHDVK YLE K PDISD C ++   G CPSG+ CRFGS+H   +    I K+   +  I    N + + LQ  LR+ ++ F  + +    +L SL+
Sbjct:   47 KKRRGQNKHRP-PTRLDFSQQLCPSF-HAKDYTCRFGDKCRYSHDVKGYLESKPPDISDKCYMYTTYGMCPSGIACRFGSSHISAEGENIINKSLYDEKRIKSVSNVIEKSLQIALRKKKVSFPRSEE----YLKSLE 178          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: D0MWM4_PHYIT (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=11 Tax=Phytophthora TaxID=4783 RepID=D0MWM4_PHYIT)

HSP 1 Score: 92.0 bits (227), Expect = 4.410e-16
Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = 0
Query:  151 KGKRGRNRKRPKDDRPALAETLCVHVSHGNECRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDP-----KTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPF 270
            K KRG  +KRP D     A+ LC  V+ G  C+FG SC+FSHD+  Y+++K  D+ + CP++D  G C  G+ CRF  +H +      + LK           + +  NDL+ DL+ KLR++   F
Sbjct:   80 KKKRGTFKKRPIDAEQDPADLLCRPVASGEGCKFGDSCKFSHDIDDYMKRKPKDLGERCPVFDAVGYCRYGMACRFAKSHIEKVDDIYRNLKREGYVETPGHDLGDEANDLTHDLRLKLRKDTYDF 205          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: A0A1Z5JMB7_FISSO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMB7_FISSO)

HSP 1 Score: 91.3 bits (225), Expect = 5.500e-16
Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 0
Query:  146 AEEFKKGKRGRNRKRPKDDRPALAETLCVHVSHGNECRFGSSCRFSHDVKAYLEKKGPDISDT---CPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACNR 274
            +E  K  K  R  KR +++    A+   +H+  G+ C  G SC+FSHD+KA+L  + PDI      CP +++ G C  G  CR G +H +  T + + K G  D S  + +N L RD+Q++LRRN+ PF C +
Sbjct:   48 SETPKSRKNKRKNKRLREENGDHAKMCLIHL-RGDVCTHGDSCKFSHDIKAFLASRPPDIDQIEGGCPHYNLYGFCMYGATCRLGGSHLNLATGENLRKEGVVDAST-QVLNLLDRDVQSQLRRNEYPFVCQK 178          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: A0A1Z5KBK5_FISSO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBK5_FISSO)

HSP 1 Score: 90.5 bits (223), Expect = 2.190e-15
Identity = 49/133 (36.84%), Postives = 73/133 (54.89%), Query Frame = 0
Query:  146 AEEFKKGKRGRNRKRPKDDRPALAETLCVHVSHGNECRFGSSCRFSHDVKAYLEKKGPDISDT---CPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACNR 274
            +E  K  K  R  KR +++   L +   +H+  G+ C  G SC+FSHD+KA+L  + PDI      CP +++ G C  G  CR G +H +  T + + K G  D S    +N L RD+Q++LRRN  PF C +
Sbjct: 1485 SENPKSRKNRRKNKRLREENGDLEKMCLIHL-RGDVCTHGDSCKFSHDIKAFLASRPPDIDQIEGGCPHYNLYGFCMYGATCRLGGSHLNLATGENLRKEGIVDAST-RVLNLLDRDVQSQLRRNDYPFVCQK 1615          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: A0A1X7ULW9_AMPQE (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7ULW9_AMPQE)

HSP 1 Score: 89.4 bits (220), Expect = 3.350e-15
Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 0
Query:  151 KGKRGRNRKRPKDDRPALAETLCVHVSHGNE--CRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACNRKGWPAFLSSLD 285
            K +RG+N+ RP   R   ++ LC    H  +  CRFG  CR+SHDVK YLE K PDISD C ++   G C SG+ CRFGS+H   +    I K+   +  I    N + + LQ  LR+ ++ F  + +    +L SL+
Sbjct:   47 KKRRGQNKHRP-PTRLDFSQQLCPSF-HAKDYTCRFGDKCRYSHDVKGYLESKPPDISDKCYMYTTYGMCLSGIACRFGSSHISVEGENIINKSLYDEKRIKSVSNVIEKSLQIALRKKKVSFPRSEE----YLKSLE 178          
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Match: H3G6D2_PHYRM (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6D2_PHYRM)

HSP 1 Score: 87.8 bits (216), Expect = 7.550e-15
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 0
Query:  182 CRFGSSCRFSHDVKAYLEKKGPDISDTCPIWDVRG-CPSGLKCRFGSAHTDP-----KTLKPITKTGAADPSIFEHMNDLSRDLQAKLRRNQMPFACN---RKGW 277
            C+FG SC+FSHD+  ++++K  D+ D CP++DV G C  G+ CRF  AHT+      + +K      +    + + +NDL+ DL+ KLR+NQ PF      RK W
Sbjct:    1 CKFGDSCKFSHDLDDFMKRKPKDMGDRCPVFDVVGYCRYGVACRFAKAHTEKVDGKYRNVKRDGYVESEGQDLGDEVNDLTHDLRVKLRKNQYPFQAKEPIRKKW 105          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig670.17736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK1_ECTSI1.220e-6168.03tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 T... [more]
A0A7S1CR92_9STRA9.940e-2031.31Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2RFF3_9STRA9.300e-1841.54tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
UPI00096B63805.130e-1739.13tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like ... [more]
A0A1X7TCR8_AMPQE1.370e-1639.13tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
D0MWM4_PHYIT4.410e-1636.51tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=11 ... [more]
A0A1Z5JMB7_FISSO5.500e-1636.84tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A1Z5KBK5_FISSO2.190e-1536.84tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
A0A1X7ULW9_AMPQE3.350e-1538.41tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]
H3G6D2_PHYRM7.550e-1539.05tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 167..244
e-value: 1.3E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR45846FAMILY NOT NAMEDcoord: 83..387
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 203..232
score: 8.615
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 167..195
score: 12.549
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 169..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig670contigF-serratus_M_contig670:350426..365866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig670.17736.1mRNA_F-serratus_M_contig670.17736.1Fucus serratus malemRNAF-serratus_M_contig670 342270..365903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig670.17736.1 ID=prot_F-serratus_M_contig670.17736.1|Name=mRNA_F-serratus_M_contig670.17736.1|organism=Fucus serratus male|type=polypeptide|length=476bp
MEVYTTPTNNEDESKSLVRVEGDACPDSNDGIAIMDDNRTTAVENAPKPP
PTSTSSETQTLVPRAGANESRLEVAVPTFRKSDGWAPIKPEFIRSREELL
ALEKASKPDNGRTHGEGEGFSFGTSISFALAESSASHGGGGAGSTAEEFK
KGKRGRNRKRPKDDRPALAETLCVHVSHGNECRFGSSCRFSHDVKAYLEK
KGPDISDTCPIWDVRGCPSGLKCRFGSAHTDPKTLKPITKTGAADPSIFE
HMNDLSRDLQAKLRRNQMPFACNRKGWPAFLSSLDSDFSKPWSREMPPTS
AESHTVSNDGAAAKAATAIAEKSNEDRVVGNGNESATVKLSIETVDLANQ
NGTVESSAAAGSPDTADAPEEKRIGEKATDVFLPPLAKRARCQGDEPSKV
GAATTICEGSPEAGADTRDTNNGGALKGGWEVEGEWVRSCLAEERSIRNG
ERWILKERCTSPRSRRSEIFPSGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf