prot_F-serratus_M_contig67.17723.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig67.17723.1
Unique Nameprot_F-serratus_M_contig67.17723.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length340
Homology
BLAST of mRNA_F-serratus_M_contig67.17723.1 vs. uniprot
Match: D7FJQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ8_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 3.030e-92
Identity = 176/342 (51.46%), Postives = 213/342 (62.28%), Query Frame = 0
Query:    9 TIIRRWATASGAFALVF------GTQPCHSFM-TGHTAFLQQ--C-GKSIIGSGGVVRPRPRWAMSTVVAE--------------DVVAAVTLPPDGGGGPE----------AGKEKRWIKDTKAGDKVIGYVAETTNFAAFVDVGVVRHGSKGKVVPVTGFLHLSEIKPPYALEGTIRAKHCEVEVKKGIHLTAYVKDVFPNAGRLTLSLDPDINKEKVLKMREFKRRKGQTQRRERLAEKGGLVEAGEVVEGYVREVRDTMLLVDVMLPRLSVLRVEKIRDSLGKNSLGKSSFVNLSEKAKPGDVVTVRVERVQDIERGGTKDAKAAISFVSWGGLNDQK 316
            T   RWA  + A A+        G  PCH+F+ +G  AF  Q  C G     +  +         +T VAE                 AA + P + G   E          A   +RWIK+ K GDKVIGYVA+TTNFAAFVD  VVR GSK K+VPVTGFLHL++IK PYALEGT   K CEVEVKKGIHLTAYVKDVFPNAGR+TLSLDP+INK+KVLK+R+ KR++ +  RRERL +KG     G++VEGYVREV ++MLLVDVM  +LSVLR   IR     NS     FVNLS K KPGD++TVR+E ++  +R G KD KA I FV+WGGL   K
Sbjct:    2 TTAGRWAATTAAAAVTIALLRCGGAPPCHAFLASGGMAFAPQHSCRGSRHCRATSMSAADGLDLSNTAVAEVDDDGSGATSRSNVAATAAGSTPGNTGXXXEKXXXXXXXXAAKAGRRWIKELKTGDKVIGYVADTTNFAAFVDCSVVRQGSKNKIVPVTGFLHLTDIKRPYALEGTPGVKDCEVEVKKGIHLTAYVKDVFPNAGRMTLSLDPNINKDKVLKLRDSKRQRSRNSRRERLHKKGRRHAVGDIVEGYVREVHESMLLVDVMFAQLSVLRASNIR-----NSEEGQKFVNLSNKTKPGDLITVRIEDIETSKRRGAKDDKATIDFVAWGGLGAAK 338          
BLAST of mRNA_F-serratus_M_contig67.17723.1 vs. uniprot
Match: W7TQN5_9STRA (Nucleic acid-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQN5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.400e-15
Identity = 60/176 (34.09%), Postives = 98/176 (55.68%), Query Frame = 0
Query:   94 IKDTKAGDKVIGYVAETTNFAAFVDVGVVRHGSKGKVVPVTGFLHLSEIKPPYALEGTIRAKHCEVE-----VKKGIHLTAYVKDVFPNAGRLTLSLDPDINKEKVLKMREFKRRKGQTQRRERLAEKGGLVEAGEVVEGYVREVRDTMLLVDVMLPRLSVLRVEKIRDSLGKNSL 264
            ++  + G ++ G V   T FAAF+DV VVR G  GK+V     LH  ++     L      +   +E     +++GIH++ YVKDVFPN+GR +++LDP I+K KV+  R+ KR  G+  +R ++ +  G+ E  E     V+ +R T LL+D+ +P  + L    I D++   S+
Sbjct:  105 LQALRPGMRLHGGVVGVTEFAAFLDVKVVREGPGGKLVRCNAMLHPHDVPEGIKLLRDSHNQPLPLETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAKVIAARKQKRLLGK--KRNKVKKLEGVEEGAEKQARVVKLLR-TALLLDIGMPVPAFLPHNYIPDTVPLESI 277          
BLAST of mRNA_F-serratus_M_contig67.17723.1 vs. uniprot
Match: A0A7S2UWN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.950e-13
Identity = 54/175 (30.86%), Postives = 91/175 (52.00%), Query Frame = 0
Query:   93 WIKDTKAGDKVIGYVAETTNFAAFVDVGVVRHGSKGKVVPVTGFLHLSEIKPPYALEGTIRAKHCEVEVKKGIHLTAYVKDVFPNAGRLTLSLDPDINKEKVLKMREFKRRKGQTQRRERLAEKGGLVEA--------GEVVEGYVREVRDTMLLVDVMLPRLSVLRVEKIRDSL 259
            W+K  K G    G V   TNF  F++ G+VR G KG V  V G LH +++ P   +    R K  +V ++KG+ +  YVK VFP +GR +L++DP I + K+ + R+ +R++G   R      K    E         G+VVEG  + V++  +  D+   + ++L+   + + +
Sbjct:  140 WLKTLKTGMPFYGGVKSVTNFGVFLECGIVRPGRKGTVTRVQGMLHKTDLAPSMKVPFQYRPKATKV-LEKGMTVKCYVKAVFPQSGRFSLTMDPTITRAKLREQRQ-RRKQGLKVRYSASEMKAWEPEVEEVKEANPGDVVEGTCKCVKNFGMYFDIGAEKSALLKASDLPEDM 312          
BLAST of mRNA_F-serratus_M_contig67.17723.1 vs. uniprot
Match: K8Z3D9_NANGC (UV excision repair protein RAD23 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3D9_NANGC)

HSP 1 Score: 81.3 bits (199), Expect = 3.080e-13
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 0
Query:   94 IKDTKAGDKVIGYVAETTNFAAFVDVGVVRHGSKGKVVPVTGFLHLSEIKPPYALEGTIRAKHCEVE-----VKKGIHLTAYVKDVFPNAGRLTLSLDPDINKEKVLKMREFKRRKGQTQRRERLAEKGGLVEAGE----VVEGYVREVRDTM 237
            ++  + G ++ G V   T FAAF+DV VVR G  GK+V     LH  ++     L      +   +E     +++GIH++ YVKDVFPN+GR +++LDP I+K KV+  R+ KR  G+  +R ++ +  G+ E  E    VV+G V +  DT+
Sbjct:  105 LQALRPGMRLHGGVVGVTEFAAFLDVKVVREGPGGKLVRCNAMLHPHDVPEGIKLLRDSHNQPLPLETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAKVIAARKQKRLLGK--KRNKVKKLEGVEEGAEKQARVVKGKVLKDDDTI 255          
BLAST of mRNA_F-serratus_M_contig67.17723.1 vs. uniprot
Match: A0A835YYC3_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.390e-12
Identity = 83/298 (27.85%), Postives = 122/298 (40.94%), Query Frame = 0
Query:   94 IKDTKAGDKVIGYVAETTNFAAFVDVGVVR-----------------------HGSKGKVVPVTGFLHLSEIKPPYALEGTIRAKHCE-----------VEVKKGIHLTAYVKDVFPNAGRLTLSLDPDINK---------------------EKVLKMREFKRRK---GQTQRRERLAEKGGLVEAGEVVEGYVREVRDTMLLVDVMLPRLSVLRVEKIRDSLGKNSLGKSSFV-NLSEKAKPGDVVTVRVERVQDIERGGTKDAKAAISFVSWGGLNDQKGNEIGETIAKAGESQA 332
            + + K G ++IG V + + +AAF+D GV R                        G+ GK+ P  GFLH S+I                             +KKG H++ YVKDVFPN+GR T++LDP I +                     EKV  MR+ KR      +  RR+  +      + G+ V G + +V +  LLVDV    L  + +  IR + G        F+ NL + A+PG  V  RV  V   ++ G   AK  + FV +    D  G         AG+ +A
Sbjct:   94 LSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKKAPPRSFMNGIVALDSAFTREKVSFMRQKKREATTIARRSRRDATSTDPSEFKDGDEVVGVINKVTEKGLLVDVKTVSLLKMPIGAIRQARG------GEFIENLRDLAQPGQSVRGRV--VSAADKDG--QAKLRLEFVDF---VDDDGXXXXXXXESAGDGEA 378          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJQ8_ECTSI3.030e-9251.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TQN5_9STRA4.400e-1534.09Nucleic acid-binding protein n=2 Tax=Monodopsidace... [more]
A0A7S2UWN5_9STRA1.950e-1330.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K8Z3D9_NANGC3.080e-1335.95UV excision repair protein RAD23 (Fragment) n=1 Ta... [more]
A0A835YYC3_9STRA1.390e-1227.85S1 motif domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 98..186
e-value: 5.3E-9
score: 45.9
coord: 221..307
e-value: 0.022
score: 23.9
NoneNo IPR availableGENE3D2.40.50.140coord: 219..299
e-value: 3.2E-5
score: 25.9
NoneNo IPR availableGENE3D2.40.50.140coord: 90..190
e-value: 9.8E-10
score: 40.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
IPR003029S1 domainPROSITEPS50126S1coord: 100..186
score: 10.752
IPR003029S1 domainPROSITEPS50126S1coord: 223..307
score: 9.627
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 94..197
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 220..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig67contigF-serratus_M_contig67:569209..576575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig67.17723.1mRNA_F-serratus_M_contig67.17723.1Fucus serratus malemRNAF-serratus_M_contig67 568416..576592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig67.17723.1 ID=prot_F-serratus_M_contig67.17723.1|Name=mRNA_F-serratus_M_contig67.17723.1|organism=Fucus serratus male|type=polypeptide|length=340bp
MHPPSIGNTIIRRWATASGAFALVFGTQPCHSFMTGHTAFLQQCGKSIIG
SGGVVRPRPRWAMSTVVAEDVVAAVTLPPDGGGGPEAGKEKRWIKDTKAG
DKVIGYVAETTNFAAFVDVGVVRHGSKGKVVPVTGFLHLSEIKPPYALEG
TIRAKHCEVEVKKGIHLTAYVKDVFPNAGRLTLSLDPDINKEKVLKMREF
KRRKGQTQRRERLAEKGGLVEAGEVVEGYVREVRDTMLLVDVMLPRLSVL
RVEKIRDSLGKNSLGKSSFVNLSEKAKPGDVVTVRVERVQDIERGGTKDA
KAAISFVSWGGLNDQKGNEIGETIAKAGESQAETGVDGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold