prot_F-serratus_M_contig667.17670.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig667.17670.1
Unique Nameprot_F-serratus_M_contig667.17670.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length344
Homology
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BLAST of mRNA_F-serratus_M_contig667.17670.1 vs. uniprot
Match: D8LGB3_ECTSI (Hypothetical leucine rich repeat and MORN motif protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB3_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.130e-127
Identity = 224/348 (64.37%), Postives = 260/348 (74.71%), Query Frame = 0 
Query:    1 MKEGKPRGKGTKTWPDTSRYNTGEFFRGXXXXXXXXXXXXGSEHTGQFRSGVRNGPGVYIDARGRKTTGRFCDDPFSGSEQDSIVAPAKTDITIESGQNNPETLLDLA-----VVADTQPALNKASLLMSKMPLHLRPMVAAAFATRARGLSPGFRASSPSLAWRRIPELVLIGCKLSEETIGPVADIMATSQKLEEVDLSWNPIRREGARAVIAALGPAPRLRRLGLAGCRLGTDGGQVVISAIGVGTEHFRLLDLDLAFNTLGAGSGEALATALRRNETLTRLSVRANGLGPEGGLRLAAGIARNCGTLKELVVTDNRFGPRVAALVAASMRGRMSQHLRGFGFRP 343
            MK+GKP G GTKTWPD S          XXXXXXXXXXXX                 V+IDARG+KT G F DD F  +E+D IVAPAK DIT+ESGQ++PETLLDLA     VV D QP+LNKAS+LM+KMPLHL P+VA AFA+ AR L+PGFR+  PS AWR + EL  I CKL  E +GP+AD +ATSQ L+EVDLSWNPIRR GAR +IAAL  +  LRRL LAGC+LG DGGQ +I+AIG G + FRL+DLDLA N+LGAG G+ LA ALRRN+TLTRLSVRANGLGPEGG  LAAG+A NCG LK++VV DNR GPRVA LVAA+MRG  S+ LRGFG+RP
Sbjct:  335 MKQGKPNGMGTKTWPDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VFIDARGQKTVGNFRDDAFGKAEEDGIVAPAKADITVESGQHDPETLLDLAISNLAVVTDRQPSLNKASVLMAKMPLHLHPLVAEAFASSARALTPGFRSVLPSFAWRTLSELATIACKLIGEAVGPIADAIATSQTLQEVDLSWNPIRRGGARLIIAALETSAHLRRLNLAGCQLGVDGGQAMIAAIGSGRDKFRLVDLDLASNSLGAGCGDPLAVALRRNKTLTRLSVRANGLGPEGGTALAAGLASNCGILKQVVVADNRLGPRVATLVAATMRGGTSECLRGFGYRP 681
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BLAST of mRNA_F-serratus_M_contig667.17670.1 vs. uniprot
Match: A0A6H5K4D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D7_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 8.510e-112
Identity = 225/442 (50.90%), Postives = 258/442 (58.37%), Query Frame = 0 
Query:    1 MKEGKPRGKGTKTWPDTSRYNTGEFFRGXXXXXXXXXXXXGSEHTGQFRSGVRNGPGVYIDARGRKTTGRFCDDPFSGSEQDSIVAPAKTDITIESGQNNPETLLDLA-----VVADTQPALNKASLLMSKMPLHLRPMVAAAFATRARGLSPGFRASSPSLAWRRIPE----------------------------------------------------------------------------------------------LVLIGCKLSEETIGPVADIMATSQKLEEVDLSWNPIRREGARAVIAALGPAPRLRRLGLAGCRLGTDGGQVVISAIGVGTEHFRLLDLDLAFNTLGAGSGEALATALRRNETLTRLSVRANGLGPEGGLRLAAGIARNCGTLKELVVTDNRFGPRVAALVAASMRGRMSQHLRGFGFRP 343
            MK+GKP GKGTKTWPD S Y        XXXXXXXXXXXX                 V+IDARG+KT G F D+ F  +E+D IVAP K DIT+ESGQ++PETLLDLA     VV D QPAL KAS+LM+KMPLHL P+VA AFA  AR L+PGFR   PS AWR + E                                                                                              L  I CKL  E +GP+AD +ATSQ L EVDLSWNPIRR GAR +IAAL  +  LRRL LAGC+LG DGGQ +I+AIG G + FRLLDLDLA N+LGAG G++LA ALRRN+TLTRLS+RANGLGPEGG  LAAG+A NCG LKE+VV DNR GPRVA LVAA+MRG  S+ LRGFG+RP
Sbjct:  297 MKQGKPNGKGTKTWPDESEY-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIDARGQKTVGNFRDNAFGKAEEDGIVAPTKADITVESGQHDPETLLDLAISNLAVVTDRQPALTKASVLMAKMPLHLHPLVAEAFALSARALTPGFRRVLPSFAWRTLSEVGTQQALSVRKEGLGWDNTQPSSSSQEAGTYRSRSECPWRCRGATTVVAAMKTAGKEKSTGRRVGGVRLCNAPLLPADTAKLSFFLEAIPNLAKLATIACKLIGEAVGPIADAIATSQTLREVDLSWNPIRRGGARLIIAALETSAHLRRLNLAGCQLGVDGGQAMIAAIGSGRDKFRLLDLDLANNSLGAGCGDSLAVALRRNKTLTRLSLRANGLGPEGGTSLAAGLASNCGVLKEVVVADNRLGPRVATLVAATMRGGTSECLRGFGYRP 737
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig667.17670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGB3_ECTSI1.130e-12764.37Hypothetical leucine rich repeat and MORN motif pr... [more]
A0A6H5K4D7_9PHAE8.510e-11250.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 246..273
e-value: 1.8
score: 15.3
coord: 274..301
e-value: 0.047
score: 22.8
coord: 215..242
e-value: 2.5
score: 14.3
coord: 187..214
e-value: 16.0
score: 8.7
NoneNo IPR availableGENE3D2.20.110.10coord: 1..107
e-value: 2.9E-13
score: 51.8
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 100..332
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 164..324
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 2..78
IPR003409MORN motifSMARTSM00698morncoord: 18..40
e-value: 0.033
score: 23.3
coord: 42..63
e-value: 8.4
score: 7.2
IPR003409MORN motifPFAMPF02493MORNcoord: 45..63
e-value: 0.014
score: 15.3
coord: 2..18
e-value: 0.17
score: 11.9
coord: 23..42
e-value: 1.7E-5
score: 24.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 248..341
e-value: 2.0E-14
score: 55.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 143..247
e-value: 3.9E-14
score: 54.2
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 249..268
e-value: 0.82
score: 9.9
coord: 274..296
e-value: 0.091
score: 12.9
coord: 187..207
e-value: 0.014
score: 15.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig667contigF-serratus_M_contig667:54269..62238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig667.17670.1mRNA_F-serratus_M_contig667.17670.1Fucus serratus malemRNAF-serratus_M_contig667 52591..62734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig667.17670.1 ID=prot_F-serratus_M_contig667.17670.1|Name=mRNA_F-serratus_M_contig667.17670.1|organism=Fucus serratus male|type=polypeptide|length=344bp
MKEGKPRGKGTKTWPDTSRYNTGEFFRGKEHGNGTKTFPDGSEHTGQFRS
GVRNGPGVYIDARGRKTTGRFCDDPFSGSEQDSIVAPAKTDITIESGQNN
PETLLDLAVVADTQPALNKASLLMSKMPLHLRPMVAAAFATRARGLSPGF
RASSPSLAWRRIPELVLIGCKLSEETIGPVADIMATSQKLEEVDLSWNPI
RREGARAVIAALGPAPRLRRLGLAGCRLGTDGGQVVISAIGVGTEHFRLL
DLDLAFNTLGAGSGEALATALRRNETLTRLSVRANGLGPEGGLRLAAGIA
RNCGTLKELVVTDNRFGPRVAALVAASMRGRMSQHLRGFGFRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt