prot_F-serratus_M_contig664.17651.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig664.17651.1
Unique Nameprot_F-serratus_M_contig664.17651.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length183
Homology
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 7.140e-64
Identity = 103/179 (57.54%), Postives = 130/179 (72.63%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+YA   L R M KPSK H   AK  LRYLAG+++  ITYK+GGFKL T++D+NW  N DNGKSTSSY+ MLA+ P+SF+ GLQ LTA ST++AELV +A+ + KE++FC NMM ELGF + F   PVY DN + LH  GNR+FS R KHIA R+ FF+ EL  +GK++IH   TE
Sbjct:    8 RYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAM-KEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRF-FFIRELVTEGKISIHYAPTE 184          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 4.370e-63
Identity = 106/179 (59.22%), Postives = 133/179 (74.30%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+YA  QL R M KPSK HM AAK  LRYLAG+++  ITYK+GGFKL T++D+NW  N DNGKSTSSY+ MLA+ P+SF+ GLQ LTA ST++AELV +A+ + KE++FC NMM ELGF + F   PVY DN + LH  GNR+FS R KHIA R+ FF+ EL  +GK++IH   TE
Sbjct:  233 RYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAM-KEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRF-FFIRELVTEGKISIHYFPTE 409          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 4.670e-61
Identity = 106/179 (59.22%), Postives = 134/179 (74.86%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+YA  QL R+M KPSK HM AAK  LRYLAG+++  ITYK+GGFKL T++D+NW  N DNGKSTSSY+ MLA+ P+SF+ GLQ LTA ST++AELV +A+ + KE++FC NMM ELG  + F   PVY DN + LH  GNR+FS R KHIA R+ FF+ EL  +GK++IH V TE
Sbjct:  454 RYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAM-KEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRF-FFIRELVTEGKISIHYVPTE 630          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 7.170e-61
Identity = 107/179 (59.78%), Postives = 135/179 (75.42%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+YA  QL R M KPSK HM AAK  LRYLAG+++  ITYK+GGFKL T++D+NW  N DNGKSTSSY+ MLA+ P+SF+ GLQ LTA ST++AELV +A+ + KE++FC NMM ELGF + F   PVY DN + LH  GNR+FS R KHIA R+ FF+ EL  +GK++IH V+TE
Sbjct:  793 RYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAM-KEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRF-FFIRELVTEGKISIHYVRTE 969          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 8.310e-59
Identity = 106/179 (59.22%), Postives = 136/179 (75.98%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+Y A+QL RAM  PSK HMGAAK +LRYL+GS +  ITYKRGGF LT  +DANWG N DN KS SSYI+M++  P+SFK GLQSLTA ST++AELV AA+ + KE++FC NMM ELGF   FRS+P+Y  N + LHV GN+ FS R KH+A R+ F++ E+ K+G+++IH + TE
Sbjct:  487 RYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAM-KETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRF-FYIREIVKEGRISIHYIPTE 662          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5KNV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV2_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 9.820e-58
Identity = 96/157 (61.15%), Postives = 118/157 (75.16%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPR 160
            RY I+YA  QL R M KPSK HM AAK  LRYLAG+++  ITYK+GGFKL T++D+NW  N DNGKSTSSY+ MLA+ P+SF+ GLQ LTA ST++AELV +A+ + KE++FC NMM ELGF + F   PVY DN + LH  GNR+FS R KHIA R
Sbjct:  110 RYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAM-KEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALR 265          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.610e-57
Identity = 104/179 (58.10%), Postives = 132/179 (73.74%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+YA  QL R M KPSK HM AAK  LRYLAG+++  ITYK+GGFKL T++D+NW  N DNGKSTSSY+ +LA+ P+SF+ GLQ LTA ST++AELV +A+ +  E++F  NMM ELGF + F   PVY DN + LH  GNR+FS R KHIA R+ FF+ EL  +GK++IH V TE
Sbjct: 1462 RYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMN-EAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRF-FFIRELVTEGKISIHYVPTE 1638          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.900e-55
Identity = 98/179 (54.75%), Postives = 126/179 (70.39%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+YA +QL R M KPSK HMGAAK   RYLAG+    I YKRGGFKLT + D+NWG N DNGKSTSS++ ML   P++FK GLQSLT QST++ ELV AA+ + KE++FC N++ ELGF +     P+Y DN + LH  GNR++S   KHIA R+ FF+ EL  +G++ IH V  +
Sbjct:  516 RYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAI-KEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRF-FFIRELVSEGRIAIHYVPAD 692          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 7.330e-53
Identity = 97/179 (54.19%), Postives = 131/179 (73.18%), Query Frame = 0
Query:    4 RYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE 182
            RY I+Y A+Q  RAM  PSK HMGAAK +LRYL+GS +  ITYKRGGF LT  ++AN G N DNGKS SSYI+M++  P S K GLQSLTA ST++AELV +A+ + KE +FC NMM ELGF   F S+P++ D+ + L+V GN+ FS   KH+A R+ F++ ++ K+G+++IH + TE
Sbjct:  574 RYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAM-KEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRF-FYIRKIVKEGRISIHYIPTE 750          
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 3.750e-50
Identity = 93/166 (56.02%), Postives = 122/166 (73.49%), Query Frame = 0
Query:   12 NQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGGFKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKAELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAFSPRAKHIAPRYIFFVHELGKKGKVTIH 177
            +QL R M K +KAHMGAAK +LR   G+ +  ITYKRGGFKLT ++DANW  N DN +STSSY++M++  P+SFK GLQ LT  ST++AEL+ AA+T+ KE++FC NMM ELGF + F   P+Y +N + LHV GN+A+S R KHIA  + F V EL K+G +TIH
Sbjct:  340 SQLARVMSKAAKAHMGAAKHLLR---GTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTM-KEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLF-FCVRELVKEGAITIH 500          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig664.17651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE7.140e-6457.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE4.370e-6359.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE4.670e-6159.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE7.170e-6159.78Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBU1_9PHAE8.310e-5959.22CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KNV2_9PHAE9.820e-5861.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH6_9PHAE1.610e-5758.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG39_9PHAE2.900e-5554.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE7.330e-5354.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J6N1_9PHAE3.750e-5056.02Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..161
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig664contigF-serratus_M_contig664:383544..384092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig664.17651.1mRNA_F-serratus_M_contig664.17651.1Fucus serratus malemRNAF-serratus_M_contig664 383544..384092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig664.17651.1 ID=prot_F-serratus_M_contig664.17651.1|Name=mRNA_F-serratus_M_contig664.17651.1|organism=Fucus serratus male|type=polypeptide|length=183bp
SSARYGILYAANQLVRAMPKPSKAHMGAAKLVLRYLAGSVNVPITYKRGG
FKLTTYNDANWGENHDNGKSTSSYIVMLAHRPISFKVGLQSLTAQSTIKA
ELVVAAVTVTKESLFCRNMMMELGFTEGFRSSPVYTDNISGLHVAGNRAF
SPRAKHIAPRYIFFVHELGKKGKVTIHLVKTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like