prot_F-serratus_M_contig664.17646.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig664.17646.1
Unique Nameprot_F-serratus_M_contig664.17646.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length170
Homology
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 2.860e-33
Identity = 73/177 (41.24%), Postives = 106/177 (59.89%), Query Frame = 0
Query:    1 MTATGFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASGKEEIKK--------FPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHTK 169
            +   GFEQ K DPCVFRK+VD  A M++V+ VD+IL    D+   +  +A L +KF  K++G+  ++ GC I R+ K   L+  Q  Y+ SMVKRFDV+  ++IPA  G + + K        +P REA+G++MW +T + PD++ AVRAVAR    P   H  A+ K   YL  T+
Sbjct:  932 LVENGFEQCKADPCVFRKMVDEVAVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPKREDEEGGEWPRREAIGSMMWVSTFSLPDVSFAVRAVARHAHAPAKRHWDAIQKTLGYLKETR 1107          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.000e-28
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    1 MTATGFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASG--------KEEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHT 168
            + A GFEQ   D CVFR + DG   +++VV VD+I     ++   D+F A+L +   +K++G+  +Y GC   RN++   L   Q  + + +   + V     +P +SG         E   +FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P L H  A M I  Y   T
Sbjct:  117 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRT 291          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.190e-28
Identity = 73/173 (42.20%), Postives = 99/173 (57.23%), Query Frame = 0
Query:    5 GFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASGK--------EEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHTK 169
            G+EQ +VDPCVFRKVVDGE   ++V+ VD+IL  A D+   +   A L +KF +KD+G+  +Y GC I  + +    K  Q  YVESM+KRFDV   A  PAA+          E     P REA+G LMWT  +TRPDIA  +  + +   +P      A+++I  YL  TK
Sbjct:   34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTK 204          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5KYI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI5_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.430e-28
Identity = 73/184 (39.67%), Postives = 109/184 (59.24%), Query Frame = 0
Query:    1 MTATGFEQAKVDPCVFRKVVDGEAKMV-------VVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASG--------KEEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHTK 169
            +   GFEQ KVDPCVFRK+VD EAKMV       + + VD++L    D+   +  +A L +KF  K +G+  ++ GC I R+ +A  L+  Q  Y++SM+ RFD +  ++IPA+ G         E+  ++  REA+G++MW +T +RPD++ AVRAVAR    P   H  A+ KI  YL  T+
Sbjct:  854 LVENGFEQCKVDPCVFRKMVD-EAKMVDEVVVMIIAIYVDDLLVAGSDE-DCEELLASLNKKFPPKYLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLIRFDEQSTSRIPASPGVDLGPKRDDEKGGEWSVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILFYLKGTR 1035          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.460e-28
Identity = 73/173 (42.20%), Postives = 100/173 (57.80%), Query Frame = 0
Query:    5 GFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASGK--------EEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHTK 169
            G+EQ +VDPCVFRKVVDGE   ++V+ VD+IL  A D+   +   A L +KF +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV   A IPAA+          E     P REA+G LMWT  +TRPDIA  +  + +   +P      A+++I  YL  TK
Sbjct:  103 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRFDVTTIAFIPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTK 273          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.470e-28
Identity = 72/173 (41.62%), Postives = 98/173 (56.65%), Query Frame = 0
Query:    5 GFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASGK--------EEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHTK 169
            G+EQ +VDPCVFRKVVDGE   ++V+ VD+IL  A D+   +   A L +KF +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV   A  PAA+          E     P REA+G LMWT  +TRPDIA  +  + +    P      A+++I  YL  TK
Sbjct:   34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLSKLQKIAHLPTGRKWNALVRIMSYLNFTK 204          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.760e-28
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    1 MTATGFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASG--------KEEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHT 168
            + A GFEQ   D CVFR + DG   +++VV VD+I     ++   D+F A+L +   +K++G+  +Y GC   RN++   L   Q  + + +   + V     +P +SG         E   +FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P L H  A M I  Y   T
Sbjct: 1453 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRT 1627          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.760e-28
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    1 MTATGFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASG--------KEEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHT 168
            + A GFEQ   D CVFR + DG   +++VV VD+I     ++   D+F A+L +   +K++G+  +Y GC   RN++   L   Q  + + +   + V     +P +SG         E   +FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P L H  A M I  Y   T
Sbjct: 1239 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRT 1413          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.840e-28
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    1 MTATGFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASG--------KEEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHT 168
            + A GFEQ   D CVFR + DG   +++VV VD+I     ++   D+F A+L +   +K++G+  +Y GC   RN++   L   Q  + + +   + V     +P +SG         E   +FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P L H  A M I  Y   T
Sbjct: 1307 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRT 1481          
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Match: A0A6H5JNU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU5_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 4.800e-28
Identity = 73/173 (42.20%), Postives = 100/173 (57.80%), Query Frame = 0
Query:    5 GFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVAELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKKEAKIPAASGK--------EEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNPGLAHKKAVMKIFQYLIHTK 169
            G+EQ +VDPCVFRKVVDGE   ++V+ VD+IL  A D+   +   A L +KF +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV   A  PAA+          E     P REA+G LMWT  +TRPDIA  +  + +   +P      A+++I  YLI TK
Sbjct:  428 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLILTK 598          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig664.17646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L060_9PHAE2.860e-3341.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JFG2_9PHAE1.000e-2838.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWY8_9PHAE1.190e-2842.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KYI5_9PHAE1.430e-2839.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXU1_9PHAE1.460e-2842.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JE75_9PHAE1.470e-2841.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE3.760e-2838.64Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE3.760e-2838.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE3.840e-2838.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JNU5_9PHAE4.800e-2842.20Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..100
e-value: 2.4E-11
score: 43.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig664contigF-serratus_M_contig664:279114..279668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig664.17646.1mRNA_F-serratus_M_contig664.17646.1Fucus serratus malemRNAF-serratus_M_contig664 279033..280373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig664.17646.1 ID=prot_F-serratus_M_contig664.17646.1|Name=mRNA_F-serratus_M_contig664.17646.1|organism=Fucus serratus male|type=polypeptide|length=170bp
MTATGFEQAKVDPCVFRKVVDGEAKMVVVVLVDNILTHAKDQATMDRFVA
ELGQKFRLKDMGDAGYYKGCHITRNRKARELKFDQHLYVESMVKRFDVKK
EAKIPAASGKEEIKKFPYREAVGALMWTATMTRPDIACAVRAVARFCDNP
GLAHKKAVMKIFQYLIHTK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2