prot_F-serratus_M_contig6635.17641.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6635.17641.1
Unique Nameprot_F-serratus_M_contig6635.17641.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length267
Homology
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BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.390e-33
Identity = 94/221 (42.53%), Postives = 123/221 (55.66%), Query Frame = 0 
Query:   26 LFLGNFQSTVVLDMGVMKMGEAREATLRIVAPEGGRRTATTFTVDPKHPSPPGLEIG-IDGGVSLAPGQCHEARVTWRPNRPGKFRGTLALRVNGRFPARASVVGEAFPLGGGGEKANRDDGRAFGNLAKKRPGGSSSSRSGGGIVPGRRVSLGGKGPRGLAHSTPASDKENCPSFSSAPKPSQPPKIPQPPSASSSAL------NRRRKMLEYAASRRLS 239
            L LGNFQ  VVLDMG++ +GE + ATLRI  PEG R+  TT   DP+HP   GLE+   DG +SL  G+  E  V WRP R GKFRG LA +V+GRFPA+ SVVGE   +GGGG++   D       +    P G+ + RS       +  +  G GP      T    KEN  S SS   P     +   P + ++AL      N+R++ML+Y+ SRRLS
Sbjct:   26 LVLGNFQGAVVLDMGLVTVGEGKGATLRIEVPEGARKAVTTIGFDPRHPLSGGLEVADFDGELSLGRGEYREVHVAWRPERVGKFRGNLAFKVDGRFPAQVSVVGETVDVGGGGKRRKGDAREGRKRVRGGLPVGARAGRS-----LSQEAASRGAGPH-----TSMYGKENRLSLSSTALPPAASVLGPSPDSFAAALCPRTANNKRQQMLKYSKSRRLS 236
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLN9_ECTSI1.390e-3342.53Similar to asp (Abnormal spindle)-like, microcepha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031549Abnormal spindle-like microcephaly-associated protein, ASH domainPFAMPF15780ASHcoord: 25..121
e-value: 3.4E-6
score: 27.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6635contigF-serratus_M_contig6635:21197..26545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6635.17641.1mRNA_F-serratus_M_contig6635.17641.1Fucus serratus malemRNAF-serratus_M_contig6635 21197..27253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6635.17641.1 ID=prot_F-serratus_M_contig6635.17641.1|Name=mRNA_F-serratus_M_contig6635.17641.1|organism=Fucus serratus male|type=polypeptide|length=267bp
MQSIIIPVPDMNPVSCPTDAESATTLFLGNFQSTVVLDMGVMKMGEAREA
TLRIVAPEGGRRTATTFTVDPKHPSPPGLEIGIDGGVSLAPGQCHEARVT
WRPNRPGKFRGTLALRVNGRFPARASVVGEAFPLGGGGEKANRDDGRAFG
NLAKKRPGGSSSSRSGGGIVPGRRVSLGGKGPRGLAHSTPASDKENCPSF
SSAPKPSQPPKIPQPPSASSSALNRRRKMLEYAASRRLSSVKHPPKDEEK
VKAPHDNVKSWAEKQAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031549ASH