prot_F-serratus_M_contig663.17630.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig663.17630.1
Unique Nameprot_F-serratus_M_contig663.17630.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length188
Homology
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BLAST of mRNA_F-serratus_M_contig663.17630.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 1.430e-68
Identity = 134/212 (63.21%), Postives = 151/212 (71.23%), Query Frame = 0 
Query:    2 SEKASVPSAPTWDRTQRACEFEVEAFDASGTLSLSVFAEVGV---TDLTSDLELGRLDLQLGDLIDCSSFRARSEYQRWFPLC-----LGDVYSSAGHV------------GRWASATEKRRDTDFAHYNPIIQLSAKWIADRPGSSEE-----DRAASREPSRSYVSALLGEVSMSLIDNLRTKELLHLSVKGVDARYAESQDFTKGSCVV 188
            S KA+V +APTWDR Q  CEF+VEA +ASGTLSLSVFAEVGV   TDL SD+E+GRLDLQLG LIDC SFRARSEYQRW+PL        D    AG              G WA+A E+RR TDFAHYNPIIQL+A+W    P SSE        A+S+  SRSYVSALLGEVSMSL+DN R KELLHLSV+ VD RYAESQ+ T+GSCVV
Sbjct: 6762 STKANVAAAPTWDRNQPVCEFKVEALEASGTLSLSVFAEVGVMGVTDLRSDVEIGRLDLQLGGLIDCCSFRARSEYQRWYPLSPPAHKTEDEQFGAGPEDSSGSGGGGSDGGTWATAMEQRRATDFAHYNPIIQLAARWS---PSSSESVSDGHGSASSQGRSRSYVSALLGEVSMSLVDNQRAKELLHLSVRDVDGRYAESQEVTRGSCVV 6970
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BLAST of mRNA_F-serratus_M_contig663.17630.1 vs. uniprot
Match: A0A6H5KKT6_9PHAE (VPS13_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT6_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.040e-66
Identity = 130/200 (65.00%), Postives = 147/200 (73.50%), Query Frame = 0 
Query:    2 SEKASVPSAPTWDRTQRACEFEVEAFDASGTLSLSVFAEVGV---TDLTSDLELGRLDLQLGDLIDCSSFRARSEYQRWFPLCLGDVYSSAG-----HVGRWASATEKRRDTDFAHYNPIIQLSAKWIADRPGSSEEDR-----AASREPSRSYVSALLGEVSMSLIDNLRTKELLHLSVKGVDARYAESQDFTKGSCVV 188
            S KA+V +APTWDR Q  CEF+VEA +ASGTLSLSVFAEVGV   TDL +D+E+GRLDLQLG LIDC SFRARSEYQ       G   SS         G WA+A E+RR TDF+HYNPIIQL+A+W    P SSE D      A+S+  SRSYVSALLGEVSMSL+DN R KELLHLSVK VD RYAESQ+ T+GSCVV
Sbjct:   31 STKANVAAAPTWDRNQPVCEFKVEALEASGTLSLSVFAEVGVMGVTDLRADVEIGRLDLQLGGLIDCCSFRARSEYQARIVHSKGPEDSSGSGGGGSDGGTWATAMEQRRATDFSHYNPIIQLAARWS---PSSSESDSDGHGPASSQGRSRSYVSALLGEVSMSLVDNQRAKELLHLSVKDVDGRYAESQEVTRGSCVV 227
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig663.17630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Y9_ECTSI1.430e-6863.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKT6_9PHAE1.040e-6665.00VPS13_C domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig663contigF-serratus_M_contig663:109494..115444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig663.17630.1mRNA_F-serratus_M_contig663.17630.1Fucus serratus malemRNAF-serratus_M_contig663 109492..115444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig663.17630.1 ID=prot_F-serratus_M_contig663.17630.1|Name=mRNA_F-serratus_M_contig663.17630.1|organism=Fucus serratus male|type=polypeptide|length=188bp
TSEKASVPSAPTWDRTQRACEFEVEAFDASGTLSLSVFAEVGVTDLTSDL
ELGRLDLQLGDLIDCSSFRARSEYQRWFPLCLGDVYSSAGHVGRWASATE
KRRDTDFAHYNPIIQLSAKWIADRPGSSEEDRAASREPSRSYVSALLGEV
SMSLIDNLRTKELLHLSVKGVDARYAESQDFTKGSCVV
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