prot_F-serratus_M_contig663.17626.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig663.17626.1
Unique Nameprot_F-serratus_M_contig663.17626.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length319
Homology
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A6H5JPN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 4.150e-70
Identity = 114/179 (63.69%), Postives = 135/179 (75.42%), Query Frame = 0
Query:   79 HPAAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSL---SEDSAGSAGKDG----------------FRTYFGGGNP 238
            HPAA+APSSTLR CDGL++V+  +R RGRQLM+LPGVLGLG  + GGKLG L +   A PVLYVEFPEGRLKCTGR +H KGRFFTLYADKA+ ++TRMDCRDVFDS VFFSKACW+G+ +DNP E+PL LP+SLQ+L    E + GS G DG                F+T+FGGGNP
Sbjct:   76 HPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRMVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQTLRGEDEQAPGSGGDDGDATGGGDAAQKLTAADFKTHFGGGNP 254          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: D8LST7_ECTSI (Putative type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.940e-69
Identity = 118/198 (59.60%), Postives = 143/198 (72.22%), Query Frame = 0
Query:   79 HPAAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSL-SEDSAGSAGKDG------------------FRTYFGGGNPNSPLKATGNLARRHSKGNE 257
            HPAA+APSSTLR CDGL++V+  +R RGRQLM+LPG LGLG  + GGKLG L + T A PVLY+EFPEGRLKCTGRT+H KGRFFTLYADKA+ ++TRMDCRDVFDS VFFSKACW+G+ +DNP E+PL LP+SLQSL  ED   S G                     F+T+FGGGNP S +  +G+   + S GN+
Sbjct:   65 HPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASGGGXXXXXXXXXGDAAPKLTAADFKTHFGGGNPASLM--SGDSESKASAGND 260          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A0D2X1W4_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X1W4_CAPO3)

HSP 1 Score: 113 bits (282), Expect = 4.020e-24
Identity = 69/159 (43.40%), Postives = 85/159 (53.46%), Query Frame = 0
Query:   87 STLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSL----------SEDSAGSAGKDGFRTYFGG 235
            + LR C G DIVRKG   + R L+  PG L    S+    +G L  + S  PV+Y++FPEGRLK  G  + T  +F  L A K +     + C DVFD VV FS+A WIG  QDNP EDPL LP SL  L          S   + SAG D  R +F G
Sbjct:  415 AVLRDCHGADIVRKGGARKERYLISFPGQLQGLTSSGTPTIGSLAKLNSPNPVMYLDFPEGRLKLFGTLVFTNSKFVALQAKKQA-----IQCEDVFDKVVTFSEATWIGHLQDNPNEDPLPLPASLIGLASAAPPSVSASRSHSASAGVD-IRDFFRG 567          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A453TD59_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD59_AEGTS)

HSP 1 Score: 107 bits (268), Expect = 4.480e-24
Identity = 54/139 (38.85%), Postives = 84/139 (60.43%), Query Frame = 0
Query:   81 AAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSLSED 219
            AA+ PS  +    G DIVR   + RGR L   PG+L    +A GG++G L D+ +  PVLY+EFP+GR+K  G  ++ K ++ TL   +++     + C DVF+S+V FS++ W+G  ++NP E  L  P  +Q+ +ED
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLA--PAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKG---VACEDVFESMVLFSESWWVGTKEENPDELKLEFPKEMQNAAED 178          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A811S6P0_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811S6P0_9POAL)

HSP 1 Score: 108 bits (271), Expect = 3.670e-23
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0
Query:   81 AAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQS 215
            A +APS  +    G D+VR+G + + R L   PG+L    +A GG++G L D+ +  PVLY+EFP+GR+K  G  ++ K ++ TL   +++       C DVF+S++ FS+ACW+G  +DNP E  L  P   Q+
Sbjct:   41 APLAPSGAVTRLQGRDVVRRGGQRKSRYLFSFPGLLA--PAASGGRIGELADLGTKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQMTRSAKGVV---CEDVFESLIVFSEACWVGTKEDNPEELKLEFPKEFQN 170          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A446Z088_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446Z088_TRITD)

HSP 1 Score: 106 bits (264), Expect = 5.880e-23
Identity = 54/139 (38.85%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   81 AAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSLSED 219
            AA+ PS  +    G DIVR   + RGR L   PG+L     A GG++G L D+ +  PVLY+EFP+GR+K  G  ++ K ++ TL   +++     + C DVF+S++ FS+A W+G  ++NP E  L  P  +Q+ +ED
Sbjct:   43 AALPPSGAVVRLQGRDIVRPRGQRRGRFLFSFPGLLAPAAGA-GGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKG---VACEDVFESMIVFSEAWWVGTKEENPDELKLEFPKEMQNAAED 177          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A453TD71_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD71_AEGTS)

HSP 1 Score: 107 bits (266), Expect = 6.820e-23
Identity = 53/139 (38.13%), Postives = 84/139 (60.43%), Query Frame = 0
Query:   81 AAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSLSED 219
            AA+ PS  +    G DIVR   + RGR L   PG+L    +A GG++G L D+ +  PVLY+EFP+GR+K  G  ++ K ++ TL   +++     + C DVF+S++ FS++ W+G  ++NP E  L  P  +Q+ +ED
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLA--PAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKG---VACEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNAAED 178          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A453TDM3_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TDM3_AEGTS)

HSP 1 Score: 103 bits (257), Expect = 8.050e-23
Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   81 AAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSL 216
            AA+ PS  +    G DIVR   + RGR L   PG+L    +A GG++G L D+ +  PVLY+EFP+GR+K  G  ++ K ++ TL   +++     + C DVF+S++ FS++ W+G  ++NP E  L  P  +Q++
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLA--PAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKG---VACEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNV 175          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: UPI001D016560 (DNA-binding protein RHL1-like isoform X1 n=4 Tax=Triticum TaxID=4564 RepID=UPI001D016560)

HSP 1 Score: 108 bits (269), Expect = 9.680e-23
Identity = 54/139 (38.85%), Postives = 84/139 (60.43%), Query Frame = 0
Query:   81 AAVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQSLSED 219
            AA+ PS  +    G DIVR   + RGR L   PG+L    +A GG++G L D+ +  PVLY+EFP+GR+K  G  ++ K ++ TL   +++     + C DVF+S++ FS+A W+G  ++NP E  L  P  +Q+ +ED
Sbjct:   42 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLA--PAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKG---VACEDVFESMIVFSEAWWVGTKEENPDELKLEFPKEMQNAAED 175          
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Match: A0A6G1CQ53_9ORYZ (Uncharacterized protein n=2 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1CQ53_9ORYZ)

HSP 1 Score: 107 bits (266), Expect = 1.230e-22
Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   82 AVAPSSTLRHCDGLDIVRKGSRSRGRQLMILPGVLGLGKSAL-GGKLGMLKDITSATPVLYVEFPEGRLKCTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQDNPGEDPLRLPDSLQS 215
            A+APSS +    G DIVR+G + + R L   PG+L    SA  GG++G L D+ S  PVLY+EFP+GR+K  G  ++ K ++ TL   + S  +  + C DVF+S++ FS+A WIG  ++NP E  L  P   Q+
Sbjct:   41 ALAPSSAVARLQGRDIVRRGGQRKSRFLFSFPGLLAPAASAASGGRVGELADLGSKNPVLYLEFPQGRMKLFGTHVYPKNKYLTL---QMSRSAKGVVCEDVFESLIVFSEAWWIGTKEENPEELKLDFPKEFQN 172          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig663.17626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPN3_9PHAE4.150e-7063.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LST7_ECTSI1.940e-6959.60Putative type II topoisomerase n=1 Tax=Ectocarpus ... [more]
A0A0D2X1W4_CAPO34.020e-2443.40Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
A0A453TD59_AEGTS4.480e-2438.85Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A811S6P0_9POAL3.670e-2338.52Hypothetical protein n=2 Tax=Miscanthus lutariorip... [more]
A0A446Z088_TRITD5.880e-2338.85Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A453TD71_AEGTS6.820e-2338.13Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A453TDM3_AEGTS8.050e-2337.50Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
UPI001D0165609.680e-2338.85DNA-binding protein RHL1-like isoform X1 n=4 Tax=T... [more]
A0A6G1CQ53_9ORYZ1.230e-2241.48Uncharacterized protein n=2 Tax=Oryza meyeriana va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038859DNA-binding protein RHL1PANTHERPTHR35698FAMILY NOT NAMEDcoord: 78..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig663contigF-serratus_M_contig663:23468..31590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig663.17626.1mRNA_F-serratus_M_contig663.17626.1Fucus serratus malemRNAF-serratus_M_contig663 22540..31643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig663.17626.1 ID=prot_F-serratus_M_contig663.17626.1|Name=mRNA_F-serratus_M_contig663.17626.1|organism=Fucus serratus male|type=polypeptide|length=319bp
MSKKRERTAPETGADHGPDPSSAESLLFQLASNSSTADPHQSKRIKSEHS
IKNSSSIDESIAGIDAASSVPVRIAKEKHPAAVAPSSTLRHCDGLDIVRK
GSRSRGRQLMILPGVLGLGKSALGGKLGMLKDITSATPVLYVEFPEGRLK
CTGRTIHTKGRFFTLYADKASNKSTRMDCRDVFDSVVFFSKACWIGRAQD
NPGEDPLRLPDSLQSLSEDSAGSAGKDGFRTYFGGGNPNSPLKATGNLAR
RHSKGNEGEGSGPKPVAEGTGEGSPKGDSPAAAAEDAAESQARRSSRATK
SKVKYIEDSDDIEDVDDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038859RHL1