prot_F-serratus_M_contig662.17612.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig662.17612.1
Unique Nameprot_F-serratus_M_contig662.17612.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length196
Homology
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A6H5K1A9_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1A9_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 5.500e-40
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 0
Query:   47 RSGEVPTSTLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKHQ 152
            R+G    +  LLDEDI+ERF  GSGPGGQKINKVRNCVQLTH P+G+ VSCQ+SREL  NRHIAR+RL EKVEF L G +SKVGRRI  ++ KKAR+QRKSRLKHQ
Sbjct:   45 RAGGTRPAFELLDEDIEERF--GSGPGGQKINKVRNCVQLTHLPSGVSVSCQDSRELHANRHIARKRLKEKVEFQLMGADSKVGRRINNIRNKKARSQRKSRLKHQ 148          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A836CHX6_9STRA (RF-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX6_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.250e-30
Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = 0
Query:   51 VPTSTLLLDE-DIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKL 136
             PT  L L+E DI E FVKGSGPGGQKINKVR+CVQLTH PTGI V CQ++R+L  NR IAR+ LAEKVEFHL+G +S++GRR++++
Sbjct:   32 APTVRLKLNEADIRESFVKGSGPGGQKINKVRSCVQLTHLPTGIQVQCQDARDLISNRAIARKMLAEKVEFHLRGKDSRIGRRVSRV 118          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A0G4IRH9_PLABS (RF_PROK_I domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRH9_PLABS)

HSP 1 Score: 112 bits (279), Expect = 5.530e-28
Identity = 55/122 (45.08%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   45 GSRSGEVPTSTLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKHQGPRQVTEAHEGSAP 166
            G+R   + +STL  ++D+DE+F+ G G GGQKINK  +CVQL H+PTG+++ CQE+R L +NR IAR+RLA +++  L GD S++ RR  +L+ +K++ + +SR K+   R+  E  +G+AP
Sbjct:   16 GARPRSLFSSTLFDEDDLDEKFIHGGGNGGQKINKTASCVQLVHKPTGLLIKCQETRSLQQNRSIARKRLAAQLDLQLNGDSSRIARRQERLRRRKSKHRSRSRAKYG--REDDEPGDGAAP 135          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: M2W9M1_GALSU (Bacterial peptide chain release factor-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W9M1_GALSU)

HSP 1 Score: 109 bits (273), Expect = 2.480e-26
Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 0
Query:   54 STLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKH 151
            S  L ++D+DE+F++G GPGGQ INK  +CV L H+PTGI V CQESR   +NR IAR+RL EK++ + +G+ESKV ++IAK++ +KA  ++K+  KH
Sbjct:   96 SIELREQDLDEKFIRGGGPGGQSINKTESCVVLVHKPTGIWVKCQESRSQFRNRQIARQRLKEKIDLYYRGEESKVAQKIAKIRARKANRRKKAIKKH 193          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A3P3YDX6_PLABS (Pyrroline-5-carboxylate reductase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YDX6_PLABS)

HSP 1 Score: 112 bits (279), Expect = 1.100e-25
Identity = 55/122 (45.08%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   45 GSRSGEVPTSTLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKHQGPRQVTEAHEGSAP 166
            G+R   + +STL  ++D+DE+F+ G G GGQKINK  +CVQL H+PTG+++ CQE+R L +NR IAR+RLA +++  L GD S++ RR  +L+ +K++ + +SR K+   R+  E  +G+AP
Sbjct:   16 GARPRSLFSSTLFDEDDLDEKFIHGGGNGGQKINKTASCVQLVHKPTGLLIKCQETRSLQQNRSIARKRLAAQLDLQLNGDSSRIARRQERLRRRKSKHRSRSRAKYG--REDDEPGDGAAP 135          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: UPI0009E32CB5 (probable peptide chain release factor C12orf65 homolog, mitochondrial n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E32CB5)

HSP 1 Score: 106 bits (265), Expect = 1.250e-25
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0
Query:   57 LLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKHQGPRQVTEAHEGSAPSPEDGFEDD 175
            L ++D++E F++G GPGGQK+NK  NCVQL H+PTGI++ C ESR L +NR IAR  L +K++F   G ES  G+ IAK+K++KA   RK R + Q    V E  +     P D  EDD
Sbjct:   55 LNEDDMEENFIRGWGPGGQKVNKSSNCVQLIHKPTGIVIKCHESRSLARNRVIARELLKQKLDFLYNGKESAAGQAIAKIKKRKASYARKRRKREQA---VAEGLQNMDDGPSDSVEDD 170          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A3M6VCW6_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCW6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.830e-25
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 0
Query:    1 MFLSILRRRFPPPFATTTSAP--FFKSTRGIDVTRHMHGSFANSFPGSRSGEVPTSTLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKH 151
            M L+ L  R+   F ++   P  FF  T    V+  +H    +S     S E PT   L + D+DE FVKGSG GGQKINKVRNCV LTH PTG+ V  Q++R L  NR IAR+ L +K++ ++ G  SK   +I  L+ KKA  + KS+ K+
Sbjct:    1 MALTRLSSRYVSAFCSSIPNPIIFFSQT----VSFPLHSRVLSS-----SAEQPTDIQLKESDLDESFVKGSGKGGQKINKVRNCVLLTHLPTGLQVRTQKTRSLDGNRRIARKLLIQKLDDYMNGSLSKNSVKIEHLRRKKANRRAKSKQKY 144          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A7S2S280_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S280_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.240e-24
Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 0
Query:   54 STLLLDE-DIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAK 135
            S L L E D++E FVKG+GPGGQKINKVRNCVQL H PTG+ V+ Q+ R L  NR IAR+RLAEKV+  + G ESK+G+++AK
Sbjct:   72 SRLTLSENDLEEAFVKGTGPGGQKINKVRNCVQLRHTPTGLTVAVQDGRSLTANRAIARKRLAEKVDLEMNGRESKLGKKVAK 154          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A2T2NRU2_CORCC (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2NRU2_CORCC)

HSP 1 Score: 102 bits (254), Expect = 1.420e-24
Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 0
Query:   51 VPTSTLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKHQGPRQVTEAHEG 163
            +P   ++LDE+I+E F+KGSGPGGQKINK  + VQL H PTGI+V CQE+R   +NR +ARR L+E++E    GD+S+   +     +KKA A +K R K++   +  E  EG
Sbjct:   14 LPPRRVILDEEIEENFLKGSGPGGQKINKTSSAVQLKHLPTGIVVKCQETRSRTQNRKLARRLLSERIEEFELGDQSRTAIKARAKSKKKASADKKKRRKYRALEEGKEVEEG 126          
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Match: A0A068RXF8_9FUNG (RF_PROK_I domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RXF8_9FUNG)

HSP 1 Score: 102 bits (254), Expect = 2.470e-24
Identity = 50/102 (49.02%), Postives = 76/102 (74.51%), Query Frame = 0
Query:   56 LLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQESRELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLKHQGPRQV 157
            +L D D+ E+F+KGSGPGGQ INK  +CV+L H PTGI+V CQ++R L +NR IAR+ L EK++ ++ GD SK  +R AK+++ KAR  R+++ K+  P+++
Sbjct:   34 VLEDSDLVEKFIKGSGPGGQAINKRVSCVELKHIPTGILVQCQQTRSLEQNRGIARKLLKEKLDTYINGDLSKSAKRAAKIQKSKARKARRAKKKYGDPKEL 135          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig662.17612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1A9_9PHAE5.500e-4071.70RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CHX6_9STRA3.250e-3066.67RF-1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A0G4IRH9_PLABS5.530e-2845.08RF_PROK_I domain-containing protein n=1 Tax=Plasmo... [more]
M2W9M1_GALSU2.480e-2652.04Bacterial peptide chain release factor-like protei... [more]
A0A3P3YDX6_PLABS1.100e-2545.08Pyrroline-5-carboxylate reductase n=1 Tax=Plasmodi... [more]
UPI0009E32CB51.250e-2547.90probable peptide chain release factor C12orf65 hom... [more]
A0A3M6VCW6_9STRA9.830e-2543.14RF_PROK_I domain-containing protein n=1 Tax=Perono... [more]
A0A7S2S280_9STRA1.240e-2462.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2T2NRU2_CORCC1.420e-2446.90RF_PROK_I domain-containing protein (Fragment) n=1... [more]
A0A068RXF8_9FUNG2.470e-2449.02RF_PROK_I domain-containing protein n=2 Tax=Lichth... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
NoneNo IPR availableGENE3D3.30.160.20coord: 26..129
e-value: 1.5E-30
score: 107.0
NoneNo IPR availablePANTHERPTHR46203FAMILY NOT NAMEDcoord: 55..159
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 58..119
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 59..156
e-value: 9.1E-22
score: 77.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig662contigF-serratus_M_contig662:160137..162684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig662.17612.1mRNA_F-serratus_M_contig662.17612.1Fucus serratus malemRNAF-serratus_M_contig662 159729..163018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig662.17612.1 ID=prot_F-serratus_M_contig662.17612.1|Name=mRNA_F-serratus_M_contig662.17612.1|organism=Fucus serratus male|type=polypeptide|length=196bp
MFLSILRRRFPPPFATTTSAPFFKSTRGIDVTRHMHGSFANSFPGSRSGE
VPTSTLLLDEDIDERFVKGSGPGGQKINKVRNCVQLTHRPTGIMVSCQES
RELPKNRHIARRRLAEKVEFHLKGDESKVGRRIAKLKEKKARAQRKSRLK
HQGPRQVTEAHEGSAPSPEDGFEDDSDDGFQDEDGDARGRGKAAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I