prot_F-serratus_M_contig6617.17608.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6617.17608.1
Unique Nameprot_F-serratus_M_contig6617.17608.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length234
Homology
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: D8LDS8_ECTSI (SECIS binding protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS8_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 1.470e-31
Identity = 105/237 (44.30%), Postives = 134/237 (56.54%), Query Frame = 0
Query:    2 CARGLDLRTVGGKRLEAVVLRSPIEEERG------LGRNLDICSGQR-PSHGEPLEQHAV--HQ-----PKRESEAPSISCREGMKSAAADGPPGATSQAASAGASEPATSLVAAAASAGTMNASSKNNGSFTVLRTAERGKRISEKYTHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAM 224
            CARGL  R V G  L+A VL  P   ++G       G    + + +R P+   PL QH    HQ     P+ +   P +    G +     G P    + A   + EP    +AAAA  G     S      T L  A+ GKRI  KY   AALPK PG  G  P  Y  Q PD EV++LVFEML LLFKFQERARL+DP KA++RRRLV+GL+EVL+G++A+KVRL+I+APNVDA+
Sbjct:  542 CARGLSGRKVAGNILDAQVLTQPAPSQQGPLQGGASGTGPPVANRERKPAKECPLPQHQASSHQSCGKVPELDGSGPGMLRGFGNRVEDCCGRP----KIACTDSDEP--QAIAAAAPPG----QSIEGPKTTAL--AKAGKRIQTKYQEAAALPKPPGVRGGLPNAYVNQPPDKEVNDLVFEMLQLLFKFQERARLSDPSKAKTRRRLVIGLREVLRGVKAKKVRLLIVAPNVDAV 766          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: A0A6H5LFS5_9PHAE (Ribosomal_L7Ae domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFS5_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.890e-29
Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 0
Query:  125 AERGKRISEKYTHIAALPKHPGSSGWG-PKTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAM 224
            A+ GKRI  KY   AALPK PG SG G P  Y  Q PD E ++LVFEML LLFKFQERARL+DP KA++RRRLV+GL+EVL+G++A+KVRL+I+APNVDA+
Sbjct:  858 AKAGKRIPMKYQEAAALPKPPGISGGGSPNAYVHQPPDKEANDLVFEMLQLLFKFQERARLSDPAKAKTRRRLVIGLREVLRGVKAKKVRLLIVAPNVDAV 958          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: A0A7S2BNP8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNP8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.380e-16
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0
Query:  158 QRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVD 222
            QR D E+D LVFEML  L KFQERAR+ DP KA+ RRRLV GL+EV +G++A KV+ V++APN+D
Sbjct:   10 QRLDGELDQLVFEMLGELMKFQERARIQDPTKAKLRRRLVFGLREVKRGIKANKVKCVVVAPNID 74          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: A0A835ZCM8_9STRA (Ribosomal_L7Ae domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.260e-13
Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 0
Query:  125 AERGKRISEKYTHIAALPKHPGSSGWG--PKTYET---QRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMA 225
            AER     + Y   A +P+ P SS     P+ Y     ++P  +VD +V  ML  LF+FQER R   P KA+++RRLV+GL+EVL+GLRA  V++V++APN++ ++
Sbjct:  497 AERRAAAPDSYKDAACVPRCPASSSSAAAPQPYAAAALRQPSADVDGVVAAMLGSLFRFQERQRAVTPAKAKAKRRLVLGLREVLRGLRAGAVKMVVIAPNINTVS 602          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: UPI000F4E3DE5 (selenocysteine insertion sequence-binding protein 2 n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4E3DE5)

HSP 1 Score: 68.9 bits (167), Expect = 7.890e-10
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0
Query:  114 KNNGSFTVLRTAERGKRISEKYTHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAEK 227
            +  GS  VL      + +  K     + P HP       + Y +Q    +VD  V  +L  L +FQ+R    DP+KAR +RRLVMGL+EVLK L+ RKV+ VI++PN + +  K
Sbjct:  493 EQTGSLDVLNNLAE-ENVPSKNVESNSSPNHPKIHSRKFRDYCSQMLSKDVDECVITLLKELVRFQDRLYQKDPMKARMKRRLVMGLREVLKHLKLRKVKCVIISPNCERVQSK 605          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: A0A8J2SHV5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHV5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.440e-9
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0
Query:  130 RISEKYTHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNV 221
            R+  KY     LPK P       + Y +   D  +DN    ++  LF+FQERARL DP KA+ RRR+V GL+EV +G+RA++V+ +I+APNV
Sbjct:  536 RLPRKYAAARDLPK-PARDETS-RDYASHPRDGLLDNACAALVSKLFEFQERARLRDPTKAKMRRRVVFGLREVRRGVRAQQVKCLIVAPNV 625          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: UPI001CF5A4AE (selenocysteine insertion sequence-binding protein 2 isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001CF5A4AE)

HSP 1 Score: 67.8 bits (164), Expect = 1.790e-9
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:  153 KTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAEK 227
            + Y +Q    EVD+ V E+L  L +FQ+R  L DPVKA+++RRLVMGL+EVLK L+ +K++ VI++PN + +  K
Sbjct:  353 REYCSQVLSKEVDSCVTELLKELVRFQDRLYLKDPVKAKTKRRLVMGLREVLKHLKLKKLKCVIISPNCEKIQSK 427          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: A0A7S1ZTC4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZTC4_TRICV)

HSP 1 Score: 63.9 bits (154), Expect = 1.890e-9
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 0
Query:  129 KRISEKYTHIAALPKHPGSSGWGPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVD 222
            K I E+Y     +PK P +    P++Y ++  D  V  L+ +ML  L + Q R+R  D   AR+RRRLVMGL+EV +G+RA KV++V++A N+D
Sbjct:    6 KVIPERYAACKRVPKIPNAGV--PRSYASRIDDENVVPLINDMLGELMRLQLRSR--DDKNARARRRLVMGLREVSRGIRAHKVKMVVMANNLD 95          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: A0A444V1F2_ACIRT (Selenocysteine insertion sequence-binding protein 2 (Fragment) n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444V1F2_ACIRT)

HSP 1 Score: 67.8 bits (164), Expect = 1.930e-9
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  153 KTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAEK 227
            + Y +Q    E+DN V ++L  L +FQ+R  L DP+KA+ +RRLVMGL+EVLK L+ +KV+ VI++PN + +  K
Sbjct:  195 REYCSQVLSKEIDNSVIDLLKELVRFQDRLYLKDPLKAKMKRRLVMGLREVLKHLKLKKVKCVIISPNCERVQSK 269          
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Match: UPI00155F7923 (selenocysteine insertion sequence-binding protein 2-like isoform X1 n=14 Tax=Acipenseroidei TaxID=186622 RepID=UPI00155F7923)

HSP 1 Score: 67.8 bits (164), Expect = 2.010e-9
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  153 KTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGLKEVLKGLRARKVRLVILAPNVDAMAEK 227
            + Y +Q    E+DN V ++L  L +FQ+R  L DP+KA+ +RRLVMGL+EVLK L+ +KV+ VI++PN + +  K
Sbjct:  653 REYCSQVLSKEIDNSVIDLLKELVRFQDRLYLKDPLKAKMKRRLVMGLREVLKHLKLKKVKCVIISPNCERVQSK 727          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6617.17608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDS8_ECTSI1.470e-3144.30SECIS binding protein 2 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LFS5_9PHAE3.890e-2966.34Ribosomal_L7Ae domain-containing protein n=1 Tax=E... [more]
A0A7S2BNP8_9STRA9.380e-1663.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZCM8_9STRA1.260e-1342.45Ribosomal_L7Ae domain-containing protein n=1 Tax=T... [more]
UPI000F4E3DE57.890e-1037.72selenocysteine insertion sequence-binding protein ... [more]
A0A8J2SHV5_9STRA1.440e-944.57Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI001CF5A4AE1.790e-948.00selenocysteine insertion sequence-binding protein ... [more]
A0A7S1ZTC4_TRICV1.890e-942.55Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A444V1F2_ACIRT1.930e-946.67Selenocysteine insertion sequence-binding protein ... [more]
UPI00155F79232.010e-946.67selenocysteine insertion sequence-binding protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 189..225
e-value: 2.3E-7
score: 30.4
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 187..228
e-value: 1.5E-7
score: 33.0
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 174..224
IPR040051Selenocysteine insertion sequence-binding protein 2PANTHERPTHR13284FAMILY NOT NAMEDcoord: 50..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6617contigF-serratus_M_contig6617:5368..7229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6617.17608.1mRNA_F-serratus_M_contig6617.17608.1Fucus serratus malemRNAF-serratus_M_contig6617 3874..8376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6617.17608.1 ID=prot_F-serratus_M_contig6617.17608.1|Name=mRNA_F-serratus_M_contig6617.17608.1|organism=Fucus serratus male|type=polypeptide|length=234bp
MCARGLDLRTVGGKRLEAVVLRSPIEEERGLGRNLDICSGQRPSHGEPLE
QHAVHQPKRESEAPSISCREGMKSAAADGPPGATSQAASAGASEPATSLV
AAAASAGTMNASSKNNGSFTVLRTAERGKRISEKYTHIAALPKHPGSSGW
GPKTYETQRPDPEVDNLVFEMLVLLFKFQERARLTDPVKARSRRRLVMGL
KEVLKGLRARKVRLVILAPNVDAMAEKWDSTQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR040051SECISBP2