prot_F-serratus_M_contig660.17581.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig660.17581.1
Unique Nameprot_F-serratus_M_contig660.17581.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length239
Homology
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: UPI0001A836C9 (ATP-dependent DNA helicase PIF1 n=2 Tax=Sorghum bicolor TaxID=4558 RepID=UPI0001A836C9)

HSP 1 Score: 122 bits (305), Expect = 1.010e-29
Identity = 86/236 (36.44%), Postives = 126/236 (53.39%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPP-------LGDVKTTIFP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLI-------LLNATLQESIYG-----IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +RIG G E  N  GE+ LP     P       L  +   IFP   A+MS  S    R I++PR   V ++N +++ R  G      S D+     H+   S  LN++TP G+P H   LK+G P+ILLR  +P  G+ N TRL+       +++A +    +      +PRI +  S++E+  F  K+ QF + L++A+ INK QGQTL  VG++LP P FSHGQL+
Sbjct:   23 PWFAEYL--LRIGGGLEEANGDGEIRLPDEICIPHTREDSDLDTLIDCIFPALNANMSNKSYITSRAILSPRNDWVDMVNMKMISRFQGNEMVYHSFDSAVDDPHNYCPSEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPAGGLCNGTRLVVRGFQRNIIDAEIMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYLPEPVFSHGQLY 256          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: UPI000B4260EA (ATP-dependent DNA helicase PIF1-like n=1 Tax=Sorghum bicolor TaxID=4558 RepID=UPI000B4260EA)

HSP 1 Score: 120 bits (302), Expect = 1.980e-29
Identity = 87/236 (36.86%), Postives = 128/236 (54.24%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPPL----GDVKTTI---FP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLI-------LLNATLQESIYG-----IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +RIG G+E  N +GE+ LP     P     GD+   I   FP   A+MS  S    R I++ R   V ++N +++ R  G      S D+     H+   S  LN++TP G+P H   LK+G PIILLR  +P  G+ N TRL+       +++A +    +      +PRI +  S++E+  F  K+ QF + L++A+ INK QGQTL  VG++LP P FSHGQL+
Sbjct:    7 PWFAEYL--LRIGGGSEEANCNGEIHLPDDICIPQNGKDGDLDMLIDCIFPALNANMSDKSYITSRAILSARNDSVDMINMKMISRFQGDEMVYHSFDSAVDDPHNHYPSEFLNTLTPNGLPPHVLKLKIGCPIILLRNIDPAGGLCNGTRLVVQGFQRNIIDAEIMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYLPEPVFSHGQLY 240          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: A0A815VZ45_ADIRI (ATP-dependent DNA helicase n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815VZ45_ADIRI)

HSP 1 Score: 124 bits (312), Expect = 6.300e-29
Identity = 86/223 (38.57%), Postives = 124/223 (55.61%), Query Frame = 0
Query:   38 WHMRIGDGNEAQNEHGEVDLPGYFFPPLGDVKTTIFPYEASMSR-PS--GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTG------GPGHSSAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLI---LLNATLQ-ESIYG--------IPRIVINSSEEELMFSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            W +++G+G    N + E++LP       G++   IF  E S+   P+   RTI+ P+  H  L+N E+L+RLSG      SID  G         + +  LNS+TP+GMP H+  LK+GA ++LLR  +    + N  RLI   L N T+  E + G        IPRI +  S+  L F L++ QF V L++A+ INK QGQT D +G+ LP P FSHGQL+
Sbjct:  769 WLIKLGNGELISNGNDEIELPSSCIL-NGNLVDEIFGREISIEDIPTLCNRTILCPKNEHSLLVNEEVLQRLSGMEKLYTSIDEVGCEDGEDATNYPTEFLNSLTPSGMPPHKLKLKIGAIVMLLRNLDVSQDLCNGIRLIVRRLQNYTIDCEVVTGSNKGNRVLIPRITLTPSDAFLPFKLRRHQFPVRLSFAMTINKSQGQTFDRLGLLLPQPVFSHGQLY 990          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: A0A6P6VHP9_COFAR (ATP-dependent DNA helicase n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6VHP9_COFAR)

HSP 1 Score: 121 bits (304), Expect = 2.730e-28
Identity = 87/236 (36.86%), Postives = 121/236 (51.27%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPPLGDVKTTI-----------FPYEASMSRPSGRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHSSA---ILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLILLN-------ATLQESIY-----GIPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P+ +  L  ++IGDG E      ++ LP     P  D  T++           F +  S S  + R I++     V+ +N  +++R  G  T  LS D T  P   +     LNSI P G+P HE  LK   P+ILLR  NP  G+ N TRLI LN       A +   I+      IPRI ++SS +E      K+ QF ++L +A+ INK QGQTLD+VGI+L  P FSHGQL+
Sbjct:  234 PSFSDFL--LKIGDGTEPTILDNKIKLPSSMLIPFIDDTTSLNLLINTVYPSLFDFLTSSSAVANRAILSTTNETVQEVNQILIQRFPGQETRYLSFDQTLDPTKQADHGDFLNSIQPPGLPPHELILKPMCPVILLRNLNPAQGLCNGTRLICLNFDKNIIHAEISVGIHIGKHVFIPRIPLHSSNDESYPIPFKRTQFPISLCFAMTINKSQGQTLDFVGIYLKEPVFSHGQLY 467          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: UPI000B4237C8 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Sorghum bicolor TaxID=4558 RepID=UPI000B4237C8)

HSP 1 Score: 120 bits (302), Expect = 6.620e-28
Identity = 87/236 (36.86%), Postives = 128/236 (54.24%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPPL----GDVKTTI---FP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLI-------LLNATLQESIYG-----IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +RIG G+E  N +GE+ LP     P     GD+   I   FP   A+MS  S    R I++ R   V ++N +++ R  G      S D+     H+   S  LN++TP G+P H   LK+G PIILLR  +P  G+ N TRL+       +++A +    +      +PRI +  S++E+  F  K+ QF + L++A+ INK QGQTL  VG++LP P FSHGQL+
Sbjct:  265 PWFAEYL--LRIGGGSEEANCNGEIHLPDDICIPQNGKDGDLDMLIDCIFPALNANMSDKSYITSRAILSARNDSVDMINMKMISRFQGDEMVYHSFDSVVDDPHNHYPSEFLNTLTPNGLPPHVLKLKIGCPIILLRNIDPAGGLCNGTRLVVRGFQRNIIDAEIMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYLPEPVFSHGQLY 498          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: UPI000B42688F (uncharacterized protein LOC8076113 n=1 Tax=Sorghum bicolor TaxID=4558 RepID=UPI000B42688F)

HSP 1 Score: 121 bits (304), Expect = 7.380e-28
Identity = 88/236 (37.29%), Postives = 126/236 (53.39%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPP-------LGDVKTTIFP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLILL----NATLQESIYG--------IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +RIG G+E  N +GEV LP     P       L  +   IFP   A+MS  S    R I++ R   V ++N +++ R  G      S D+     H+   S  LN++TP G+P H   LK+G P+ILLR  +P  G+ N TRL++     N    E + G        +PRI +  S++E+  F  K+ QF + L++A+ INK QGQTL  VG++LP P FSHGQL+
Sbjct:  963 PWFAEYL--LRIGGGSEETNCNGEVHLPDDICIPQTEKDSDLDTLIDCIFPALNANMSNKSYITSRAILSSRNDWVDMINMKMISRFQGNEMVYHSFDSAVDDPHNYYPSEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPAGGLCNGTRLVVRGFQRNIVDAEIMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYLPEPVFSHGQLY 1196          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: A0A1D6NZH8_MAIZE (ATP-dependent DNA helicase n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6NZH8_MAIZE)

HSP 1 Score: 121 bits (304), Expect = 7.710e-28
Identity = 83/236 (35.17%), Postives = 127/236 (53.81%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPP-------LGDVKTTIFP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLILL----NATLQESIYG--------IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +R+GDG E  N  G++ LP     P       L ++   +FP    +MS  +    R I++ R   V ++NA++++R  G      S D+     H+      LN++TP G+P H   LK+G P+ILLR  +P  G+ N TRL++     N+   E + G        +PRI +  S+EE+  F  K+ QF V L++A+ +NK QGQT+  VG++LP P FSHGQL+
Sbjct: 1443 PWFAEYL--LRVGDGTEDTNSDGDICLPDEVCVPYSGSDSDLDNLIDFVFPNLNENMSDSTYITSRAILSTRNDWVDMINAKMIDRFQGEHMVYHSFDSAMDDPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVIRGFQRNSIDAEIVLGQHAGKRIFLPRIPLCPSDEEMFPFQFKRKQFPVRLSFAMTVNKAQGQTIPNVGVYLPEPVFSHGQLY 1676          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: A0A1D6HJR0_MAIZE (ATP-dependent DNA helicase n=4 Tax=Zea mays TaxID=4577 RepID=A0A1D6HJR0_MAIZE)

HSP 1 Score: 121 bits (304), Expect = 7.790e-28
Identity = 83/236 (35.17%), Postives = 129/236 (54.66%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPP-------LGDVKTTIFP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLILL----NATLQESIYG--------IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +R+G+G E  N  G++ LP     P       L ++   +FP    +MS  +    R I++ R   V ++NA+++ER  G      S D+     H+      LN++TP G+P H   LK+G P+ILLR  +P  G+ N TRL++     N+   E + G        +PRI +  S+EE+  F  K+ QF+V L++A+++NK QGQT+  VG++LP P FSHGQL+
Sbjct: 1502 PWFAEYL--LRLGNGTEDTNSDGDICLPDEVCVPYSGSDSDLDNLIDFVFPNLNENMSDSTYITSRAILSTRNDWVDMINAKMIERFQGEHMVYHSFDSAMDDPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVVRGFQRNSIDAEIVLGQHAGKRIFLPRIPLCPSDEEMFPFQFKRKQFTVRLSFAMMVNKAQGQTIPNVGVYLPEPVFSHGQLY 1735          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: A0A3L6DF83_MAIZE (ATP-dependent DNA helicase n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6DF83_MAIZE)

HSP 1 Score: 121 bits (304), Expect = 7.810e-28
Identity = 83/236 (35.17%), Postives = 127/236 (53.81%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPP-------LGDVKTTIFP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLILL----NATLQESIYG--------IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +R+GDG E  N  G++ LP     P       L ++   +FP    +MS  +    R I++ R   V ++NA++++R  G      S D+     H+      LN++TP G+P H   LK+G P+ILLR  +P  G+ N TRL++     N+   E + G        +PRI +  S+EE+  F  K+ QF V L++A+ +NK QGQT+  VG++LP P FSHGQL+
Sbjct: 1690 PWFAEYL--LRVGDGTEDTNSDGDICLPDEVCVPYSGSDSDLDNLIDFVFPNLNENMSDSTYITSRAILSTRNDWVDMINAKMIDRFQGEHMVYHSFDSAMDDPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVIRGFQRNSIDAEIVLGQHAGKRIFLPRIPLCPSDEEMFPFQFKRKQFPVRLSFAMTVNKAQGQTIPNVGVYLPEPVFSHGQLY 1923          
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Match: A0A3L6EQP8_MAIZE (ATP-dependent DNA helicase n=3 Tax=Zea mays TaxID=4577 RepID=A0A3L6EQP8_MAIZE)

HSP 1 Score: 121 bits (304), Expect = 7.830e-28
Identity = 83/236 (35.17%), Postives = 129/236 (54.66%), Query Frame = 0
Query:   31 PALAKLLWHMRIGDGNEAQNEHGEVDLPGYFFPP-------LGDVKTTIFP-YEASMSRPS---GRTIVAPRIHHVRLLNAEILERLSGPGTPSLSIDTTGGPGHS---SAILNSITPTGMPTHEFPLKVGAPIILLRTTNPYYGMFNSTRLILL----NATLQESIYG--------IPRIVINSSEEELM-FSLKKIQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF 239
            P  A+ L  +R+G+G E  N  G++ LP     P       L ++   +FP    +MS  +    R I++ R   V ++NA+++ER  G      S D+     H+      LN++TP G+P H   LK+G P+ILLR  +P  G+ N TRL++     N+   E + G        +PRI +  S+EE+  F  K+ QF+V L++A+++NK QGQT+  VG++LP P FSHGQL+
Sbjct: 1565 PWFAEYL--LRLGNGTEDTNSDGDICLPDEVCVPYSGSDSDLDNLIDFVFPNLNENMSDSTYITSRAILSTRNDWVDMINAKMIERFQGEHMVYHSFDSAMDDPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVVRGFQRNSIDAEIVLGQHAGKRIFLPRIPLCPSDEEMFPFQFKRKQFTVRLSFAMMVNKAQGQTIPNVGVYLPEPVFSHGQLY 1798          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig660.17581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0001A836C91.010e-2936.44ATP-dependent DNA helicase PIF1 n=2 Tax=Sorghum bi... [more]
UPI000B4260EA1.980e-2936.86ATP-dependent DNA helicase PIF1-like n=1 Tax=Sorgh... [more]
A0A815VZ45_ADIRI6.300e-2938.57ATP-dependent DNA helicase n=2 Tax=Adineta ricciae... [more]
A0A6P6VHP9_COFAR2.730e-2836.86ATP-dependent DNA helicase n=3 Tax=Coffea TaxID=13... [more]
UPI000B4237C86.620e-2836.86ATP-dependent DNA helicase PIF1-like n=1 Tax=Sorgh... [more]
UPI000B42688F7.380e-2837.29uncharacterized protein LOC8076113 n=1 Tax=Sorghum... [more]
A0A1D6NZH8_MAIZE7.710e-2835.17ATP-dependent DNA helicase n=3 Tax=Zea mays TaxID=... [more]
A0A1D6HJR0_MAIZE7.790e-2835.17ATP-dependent DNA helicase n=4 Tax=Zea mays TaxID=... [more]
A0A3L6DF83_MAIZE7.810e-2835.17ATP-dependent DNA helicase n=1 Tax=Zea mays TaxID=... [more]
A0A3L6EQP8_MAIZE7.830e-2835.17ATP-dependent DNA helicase n=3 Tax=Zea mays TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 33..170
e-value: 2.7E-11
score: 43.3
NoneNo IPR availablePANTHERPTHR23274:SF33coord: 125..239
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 125..239
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 81..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig660contigF-serratus_M_contig660:111801..112572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig660.17581.1mRNA_F-serratus_M_contig660.17581.1Fucus serratus malemRNAF-serratus_M_contig660 111377..112572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig660.17581.1 ID=prot_F-serratus_M_contig660.17581.1|Name=mRNA_F-serratus_M_contig660.17581.1|organism=Fucus serratus male|type=polypeptide|length=239bp
MRASSVLLSLRNGRRLSTHHQHGGRGGGRQPALAKLLWHMRIGDGNEAQN
EHGEVDLPGYFFPPLGDVKTTIFPYEASMSRPSGRTIVAPRIHHVRLLNA
EILERLSGPGTPSLSIDTTGGPGHSSAILNSITPTGMPTHEFPLKVGAPI
ILLRTTNPYYGMFNSTRLILLNATLQESIYGIPRIVINSSEEELMFSLKK
IQFSVTLAYAIIINKVQGQTLDYVGIFLPSPNFSHGQLF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase