prot_F-serratus_M_contig6597.17563.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6597.17563.1
Unique Name	prot_F-serratus_M_contig6597.17563.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	103

Homology

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.780e-31
Identity = 65/103 (63.11%), Postives = 75/103 (72.82%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP+ LWGELM TA Y+ NR PH+AL+  +PYK L GT   L  LRV+GARAFVH E  TK L  +  EGRLV YS +SKSYR+YN  TRR+ ESRNVIFIE
Sbjct:  755 STLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIE 857

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.780e-31
Identity = 65/103 (63.11%), Postives = 75/103 (72.82%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP+ LWGELM TA Y+ NR PH+AL+  +PYK L GT   L  LRV+GARAFVH E  TK L  +  EGRLV YS +SKSYR+YN  TRR+ ESRNVIFIE
Sbjct:  661 STLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIE 763

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.830e-31
Identity = 65/103 (63.11%), Postives = 75/103 (72.82%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP+ LWGELM TA Y+ NR PH+AL+  +PYK L GT   L  LRV+GARAFVH E  TK L  +  EGRLV YS +SKSYR+YN  TRR+ ESRNVIFIE
Sbjct:  984 STLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIE 1086

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.060e-29
Identity = 63/103 (61.17%), Postives = 74/103 (71.84%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP+ LWG+LM TA Y+ NR PH+AL+  +PYK L GT   L   RV+GARAFVH E  TK L  +  EGRLV YS +SKSYR+YN  TRR+ ESRNVIFIE
Sbjct:   11 STLPSLLWGKLMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHPRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIE 113

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.360e-28
Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP FLWGEL+ TA Y+ NR PH+AL   +PYK L G    L  LRVIG+RAFVH E  T+ L  +  EGRLV YS +SKSYR+YN  TRR+  SRNV+FIE
Sbjct:  225 STLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIE 327

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.880e-28
Identity = 62/103 (60.19%), Postives = 71/103 (68.93%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP+ LWGELM TA Y+ NR PH+AL+    YK L GT   L  LRV+GARAFVH E  TK L  +  EGRLV YS +SKSYR+YN  T R+ ESRN IFIE
Sbjct:  200 STLPSLLWGELMQTAVYLSNRTPHAALHNXXXYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRACEGRLVGYSLDSKSYRIYNAQTTRVRESRNDIFIE 302

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.660e-27
Identity = 60/103 (58.25%), Postives = 71/103 (68.93%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP FLWGEL+ TA Y+ NR PH+AL   +PYK L G    L  LRVIG+RAFVH    T+ L  +  EGRLV YS+ SKSYR+YN  TRR+  SRNV+FIE
Sbjct:  776 STLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIE 878

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.080e-26
Identity = 59/103 (57.28%), Postives = 70/103 (67.96%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            S LP FLWGEL+ TA Y+ NR PH AL   +PYK L G    L  LRVIG+RAFVH E  T+ L  +  EGRLV YS +SKSYR+YN  TRR+  SR V+FI+
Sbjct:  694 STLPNFLWGELIQTAVYLSNRVPHEALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRIVVFIK 796

[Close]

BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5JRS9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS9_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.430e-25
Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:    4 PTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVIFIE 103
            P  LWGELM TA  + NR+PHS L   +PY  + G + DL  LRVIGAR+FV+ ER TK L+ +  EG+L  +S +SK+YR+YNP T  ++ESRNV FIE
Sbjct: 1109 PPTLWGELMMTAVDLSNRSPHSVLGGVTPYFKMYGKEADLSRLRVIGARSFVNYERYTKKLSDRTFEGKLCGFSRDSKTYRIYNPATGNVVESRNVTFIE 1208

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BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 3.940e-24
Identity = 54/95 (56.84%), Postives = 65/95 (68.42%), Query Frame = 0

Query:    1 SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIGARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIME 95
            S LP FLWGEL+ TA Y+ NR PH+AL   +PYK L G    L  LRVIG+RAFVH E  T+ L  +  EGRLV YS +SKSYR+YN  TRR+ +
Sbjct:  650 STLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRD 744

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6597.17563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KJN3_9PHAE	3.780e-31	63.11	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5JYB5_9PHAE	3.780e-31	63.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J842_9PHAE	3.830e-31	63.11	Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5KMG0_9PHAE	1.060e-29	61.17	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KL37_9PHAE	1.360e-28	59.22	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KNH5_9PHAE	1.880e-28	60.19	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JC75_9PHAE	1.660e-27	58.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JIN1_9PHAE	1.080e-26	57.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRS9_9PHAE	2.430e-25	54.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KC00_9PHAE	3.940e-24	56.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF265		coord: 1..103
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6597	contig	F-serratus_M_contig6597:18061..18369 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6597.17563.1	mRNA_F-serratus_M_contig6597.17563.1	Fucus serratus male	mRNA	F-serratus_M_contig6597 18061..18369 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6597.17563.1 ID=prot_F-serratus_M_contig6597.17563.1|Name=mRNA_F-serratus_M_contig6597.17563.1|organism=Fucus serratus male|type=polypeptide|length=103bp
SGLPTFLWGELMFTAAYVGNRAPHSALNMQSPYKMLKGTKPDLRILRVIG
ARAFVHIERRTKNLALKVVEGRLVEYSSNSKSYRVYNPVTRRIMESRNVI
FIE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039537	Retrotran_Ty1/copia-like