prot_F-serratus_M_contig659.17558.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig659.17558.1
Unique Nameprot_F-serratus_M_contig659.17558.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length875
Homology
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BLAST of mRNA_F-serratus_M_contig659.17558.1 vs. uniprot
Match: D8LKP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP9_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 2.800e-32
Identity = 95/241 (39.42%), Postives = 126/241 (52.28%), Query Frame = 0 
Query:   85 LSEVWGFIPPLGERARNLRLLFLGIVAALTIALVLSYPIGAFMRLFSASHPPSVRRQHALLALAGYLALASLTLSLAEE-WHPVDAAYFVSATVSTIGCGDVAPRSLLGKLMACTLSIAGPLAAAVFWRDARARPVPSHQAKEEGRGRPAFGTPDSLDASDVRHLSGEAEGTRETRISDAVWAFVGVLMAVATCAGVFLKVPRRSSGATADGEGRDVGESHVETTLIDAVYDAFMTLATVG 324
            +SE+   +PPLGERAR  RL FLG+VAAL  A+VLSYP+GA  RLFS S PPS RR+ A    A YL+LA LTL LAE+ W  +DAAYF +AT++T                                                 RGR   G    +D +  R +S + E   + R++DA+WA VG LM +  CAGVFL+  R   G   D EG D+  +   T+++ AV+ A + L+TVG
Sbjct:    1 MSELRDVLPPLGERARAARLAFLGVVAALAAAMVLSYPLGAIARLFSPSRPPSARRRLASAVFAVYLSLACLTLCLAEDGWTGLDAAYFSTATLTT------------------------------------------------ERGRQGSG----IDFT--RPMSQQDEEEHQARVADAIWALVGFLMVLLGCAGVFLRASRGGGGGAVD-EGGDLPAT---TSVLGAVFSALLALSTVG 183
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BLAST of mRNA_F-serratus_M_contig659.17558.1 vs. uniprot
Match: A0A6H5L1X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X2_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 7.060e-5
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:  676 PRLHEGKGD-PVSIDEFIVKKLLEQGKLGRMEAAQMMLEFEQT 717
            P   E +G+ P++ DEFI+KKLL++GKLGRMEAAQMMLEFE +
Sbjct:  440 PAEAEAEGEKPLTADEFIIKKLLDEGKLGRMEAAQMMLEFEHS 482
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig659.17558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKP9_ECTSI2.800e-3239.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1X2_9PHAE7.060e-565.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 147..208
e-value: 4.1E-9
score: 36.3
NoneNo IPR availableGENE3D1.10.287.70coord: 123..217
e-value: 2.3E-12
score: 48.6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..262
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 283..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..361
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 362..874
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..282
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 135..210
NoneNo IPR availableTMHMMTMhelixcoord: 142..161
NoneNo IPR availableTMHMMTMhelixcoord: 263..282
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig659contigF-serratus_M_contig659:238556..258580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig659.17558.1mRNA_F-serratus_M_contig659.17558.1Fucus serratus malemRNAF-serratus_M_contig659 238455..258874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig659.17558.1 ID=prot_F-serratus_M_contig659.17558.1|Name=mRNA_F-serratus_M_contig659.17558.1|organism=Fucus serratus male|type=polypeptide|length=875bp
MSSSFSRHSATTPRHPSRHGSSRLGSSWHGSSRHGSSRHGSVSSSTHGSS
HGSSRHGGRDVPVTRYYYQPRVHAASLLGLQVWALSEVWGFIPPLGERAR
NLRLLFLGIVAALTIALVLSYPIGAFMRLFSASHPPSVRRQHALLALAGY
LALASLTLSLAEEWHPVDAAYFVSATVSTIGCGDVAPRSLLGKLMACTLS
IAGPLAAAVFWRDARARPVPSHQAKEEGRGRPAFGTPDSLDASDVRHLSG
EAEGTRETRISDAVWAFVGVLMAVATCAGVFLKVPRRSSGATADGEGRDV
GESHVETTLIDAVYDAFMTLATVGPADAPFSELSSLGRRAAMIPAMLAGA
MIFSRSMWALVDLLIPPTFEVAPASRAFCRRSRAALSSLSSPMLSRFGGR
SGEGVRGSSAAGVWRDFAAVGSPIVSEGKATTAAAGFAGRHPRAFTSRRQ
EREADAPAKKDNPERLRVEGREAVSGREGSALTATRWRRPPPPSPSLPPT
VAFVDSDDEDEGWVSEEGLAVSRGPRDVCDEVDGRSQEDAPEAGGDGGGE
DPGGDAFRKPNLGNDAAQGIHQGGTSLDLDGAPRGVRSWEAGSIRRNQSA
RRQKEEKGGADGAGGSPGGRRLDSRWEGNDRDTDKDEEITIGSNHRGSLD
SVEEVDEETGGSSNFVLGKSGWRQAPRLHEGKGDPVSIDEFIVKKLLEQG
KLGRMEAAQMMLEFEQTAARRRRASSSTSSTACEHAGPKGKERPKSQRQG
GGEEQTREGGDSVARKSSSRNTGLDEPADASQDSTANASAVAPNSHGGRA
TGLASLEIRQRLGRALSASRSLRPAGDILPAHSGERVAPRRRGDEGVPVV
GIDADAPSNRGSPIYEPLLPPPGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013099K_chnl_dom