prot_F-serratus_M_contig659.17553.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig659.17553.1
Unique Nameprot_F-serratus_M_contig659.17553.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length186
Homology
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: D7FUE3_ECTSI (UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUE3_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 4.690e-63
Identity = 108/179 (60.34%), Postives = 127/179 (70.95%), Query Frame = 0
Query:   15 RLA-RGLGFAPGVRVGEGFNLFLYDRGLSASTTAHQSQPSPTRWHRATSFHIARED-------ARSMVLRPDWEREGRVFGLRMPPRKEGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            RLA R  GF+P      G    +  R  +A +    ++P+   +    S   AR         AR MVLRPDWEREGRV+GLRMP  +   RAFEYLV YPCEFEIKVIG+NEG+FADDIAATVSA C+V+ SDVRFTVR T+SG+YQSITVHAPV+NA MLY+CYE+IDEDPRVKFKF
Sbjct:    4 RLATRSFGFSPAS--SGGIAAQVSSRRAAARSHGRHTRPTAAAFTSGPSAAAARPTGSRPPTTARKMVLRPDWEREGRVYGLRMPRERTAERAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNATMLYKCYELIDEDPRVKFKF 180          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A836CJU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 7.800e-35
Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 0
Query:   70 ARSMVLRPDWEREGRVFGLRMPPRKEGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            A SM+LR D +REGR  G          RAFEYLV YPC+F+IK +G N+G  ADD+AA V + C+V+ + V +TVR T SGKY+S+T+ APV N+ MLY+CYE+I +D RV+FKF
Sbjct:   42 ALSMILRTDADREGRKMG--------NPRAFEYLVDYPCKFQIKAVGHNKGNLADDLAALVGSVCEVEPAAVEYTVRDTDSGKYRSVTLMAPVSNSDMLYKCYEVIGQDERVRFKF 149          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A836C812_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C812_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.830e-33
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 0
Query:   70 ARSMVLRPDWEREGRVFGLRMPPRKEGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            AR M LR D +REGR  G          R FEYLV+YPCEF+IKV+G N+ + ADD+AA V+A C+V+   V +T R T SGKY S+T+ APV +  MLY CY  I ED RVKFKF
Sbjct:   43 ARGMALRSDDDREGRKLG--------NPRVFEYLVEYPCEFQIKVVGFNDASLADDLAAIVAATCEVEVGAVTYTTRETESGKYSSVTLTAPVASPAMLYECYAKIGEDARVKFKF 150          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A6U5NVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5NVB4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.380e-24
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 0
Query:   95 EGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            E  R F+ LV+YPC+F +K++G NEG FA ++ + V+  C+ +  DV +T R  + GK+ S+TV APV+NA+MLY  YE +D+DPRVKFKF
Sbjct:   57 EKSRVFDALVEYPCKFTMKIVGANEGNFAQEMVSLVADVCEKEMEDVAYTTR--AMGKWTSVTVKAPVENAEMLYAIYEAVDKDPRVKFKF 145          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: B5Y5R9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y5R9_PHATC)

HSP 1 Score: 103 bits (258), Expect = 5.000e-24
Identity = 63/163 (38.65%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   24 PGVRVGEGFNLFLYDRGLSASTTAHQSQPSPTRWHRATSFHIAREDARSMVLRPDWEREGRVFGLRMPPRK-EGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            P  R G+GF       G + S  A +  P      R   F +      + + +P+++ +G  + L    R  E  R FE LV YPC+F +K++G NEG F +++ A V+ +C V A  ++ +VR  + GK+ S+TV APVQ+A+MLY  YE+ID DPRVKFKF
Sbjct:  100 PSARAGQGF-------GKTRSPVAQRITPP-----REKPF-VGIGPPLNDITKPEYDDQG--YTLYADERTGEKSRVFEALVDYPCDFTMKIVGANEGAFVEEMVAVVAESCLVQADSIQHSVR--ALGKWTSVTVQAPVQSAEMLYGLYEVIDRDPRVKFKF 245          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A7S2SR06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR06_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.160e-23
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 0
Query:  100 FEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            FE ++ YPCEFEIKVIG  EG FA D+ A +S    V A D+ F+ R T + K+ S+++ A VQ + MLY+CYE +D+DPRVKFKF
Sbjct:   85 FERMLDYPCEFEIKVIGRLEGEFARDMVAIISTVTGVPAMDIAFSTRETPNNKFTSVSIKATVQTSDMLYQCYEELDKDPRVKFKF 170          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A7S0CBH8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBH8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.450e-23
Identity = 50/88 (56.82%), Postives = 67/88 (76.14%), Query Frame = 0
Query:   98 RAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            R FE LV+YPCEF+IK++G N+GTF  D+ A V+ +C V +  V +T R+  +GK+ SITV+APVQ+A+MLY  YE ID+D RVKFKF
Sbjct:  186 RVFEALVEYPCEFQIKIVGANDGTFVTDMIALVAESCGVKSDAVSWTERL--NGKWVSITVNAPVQSAEMLYALYEDIDKDARVKFKF 271          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A7S1Z075_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z075_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.310e-22
Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 0
Query:   95 EGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            E  R FE LV YPC+F +K++G NEG F  +I   V+ +C+V   DV ++ R   +GK+ S+TVHAPV++A+MLY  YE +D DPRVKFKF
Sbjct:  162 EKKRVFEALVDYPCDFTMKIVGRNEGAFVLEIVQVVADSCEVGIEDVPYSKR--DNGKWTSVTVHAPVKDAEMLYTLYENVDRDPRVKFKF 250          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A1E7EX02_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EX02_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.870e-22
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
Query:   98 RAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            R FE L++YP  F +K++G NEG F ++I A V+ AC+ D   +  + +V  +GK+ S+T HAPVQNA+MLY  YE ID DPRVKFKF
Sbjct:  136 RVFEALIEYPSIFTMKIVGANEGLFVEEIVAVVAEACESDFEQINHSTKV--NGKWVSVTCHAPVQNAEMLYALYEKIDLDPRVKFKF 221          
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Match: A0A7S1BKS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKS9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.040e-21
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0
Query:   95 EGVRAFEYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSSGKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF 185
            E  R FE LV+YPC F IK++G  EG F  D+   V+  C V  +DV ++ R    GK+ SITV APV+NA+MLY+ YE+I  DPRVKFKF
Sbjct:  207 EKARVFESLVEYPCTFPIKIVGAKEGQFVTDMVDLVAETCNVGRTDVTYSER--EKGKWTSITVQAPVENAQMLYKVYEVIGRDPRVKFKF 295          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig659.17553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE3_ECTSI4.690e-6360.34UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CJU5_9STRA7.800e-3554.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C812_9STRA1.830e-3354.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U5NVB4_9STRA2.380e-2450.55Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B5Y5R9_PHATC5.000e-2438.65Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2SR06_9STRA5.160e-2353.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0CBH8_9STRA6.450e-2356.82Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1Z075_9STRA2.310e-2251.65Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7EX02_9STRA4.870e-2252.27Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1BKS9_9STRA1.040e-2152.75Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007454Uncharacterised protein family UPF0250PFAMPF04359DUF493coord: 103..183
e-value: 4.8E-20
score: 71.9
NoneNo IPR availableGENE3D3.30.70.260coord: 98..184
e-value: 1.9E-14
score: 55.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.606
IPR027471YbeD-like domain superfamilySUPERFAMILY117991YbeD/HP0495-likecoord: 101..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig659contigF-serratus_M_contig659:165067..171443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig659.17553.1mRNA_F-serratus_M_contig659.17553.1Fucus serratus malemRNAF-serratus_M_contig659 164552..171676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig659.17553.1 ID=prot_F-serratus_M_contig659.17553.1|Name=mRNA_F-serratus_M_contig659.17553.1|organism=Fucus serratus male|type=polypeptide|length=186bp
MRPPSLLATAIIFYRLARGLGFAPGVRVGEGFNLFLYDRGLSASTTAHQS
QPSPTRWHRATSFHIAREDARSMVLRPDWEREGRVFGLRMPPRKEGVRAF
EYLVKYPCEFEIKVIGLNEGTFADDIAATVSAACQVDASDVRFTVRVTSS
GKYQSITVHAPVQNAKMLYRCYEMIDEDPRVKFKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007454UPF0250
IPR027471YbeD-like_sf