prot_F-serratus_M_contig656.17530.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig656.17530.1
Unique Nameprot_F-serratus_M_contig656.17530.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length206
Homology
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 7.380e-31
Identity = 96/229 (41.92%), Postives = 110/229 (48.03%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGC----GRVGGGFSQEELKDLFILKTGTSSDTFDKLRRRIPL----------LRLGDDAHEELSSPEFD-RHDGS----------------MSRKGWREYNGPSDIADLALRRALHRESPGFGEDCDSVRGVSASAAASGPEVTFVREVKRG 198
            MARVWRLGQTKEV MYRL+STGTLEE+I+QRQIFKGALYDLIHD+ND  S                                 G+ G GFSQEELK+LF+LK  T SDT+DKLRR              +R G    E     E   R DG                 +  + W +Y GPS + D ALR AL  E+ G                     VTFVREVKRG
Sbjct:  837 MARVWRLGQTKEVCMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLKAETRSDTYDKLRRGRAAATPRAAGAAGVREGGRYQEVTLEREVGARGDGEEDGWQGPTAAAAPVVDVEEQAWEDYVGPSAVVDKALRLALLEEATGTPSQVGG--SXXXXXXXXXXVVTFVREVKRG 1063          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.860e-30
Identity = 89/203 (43.84%), Postives = 106/203 (52.22%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGC---------GRVGGGFSQEELKDLFILKTGTSSDTFDKLRR----RIPLLRLGDDAHE----ELSSPEFD---RHDG----------------SMSRKGWREYNGPSDIADLALRRALHRESPG 167
            MARVWRLGQTKEVSMYRL+STGTLEE+I+QRQIFKGALYDLIHD+ND  S                                      G+ G GFSQEELK+LF+L+T T SDT+DKLRR      P       AHE    +  +PE +   R DG                ++  + W +Y GPS + D ALR AL  E  G
Sbjct:  867 MARVWRLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLRTETRSDTYDKLRRGRAAATPTAAGAASAHEGGRYQEVTPEREAGARGDGEEDGGRGATAAAAPVVAVEEEAWEDYGGPSAVVDKALRLALLEEPTG 1069          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A8J9RPJ2_9CHLO (DNA repair and recombination protein RAD54-like n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RPJ2_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 1.200e-13
Identity = 69/215 (32.09%), Postives = 99/215 (46.05%), Query Frame = 0
Query:    2 ARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRRRIPLLRLGDDAHEELSS--PEF--DRHDGSMSR------KGWREYNGPSDIADLALRRALHRESPGF---------------GEDCDSVRGVSA-SAAASGPEVT 190
            ARVWR GQ K V +Y+ ++TGT+EE ++QRQ+ K  L  ++          N TA+    RS            SDG G      S E+L+DLF L+  T+SDTFD +          D+  E+ SS  P F  D H   +        K W ++   S + D ++ R + +E PG                GE+ + V G S  +AAA+G  VT
Sbjct:  640 ARVWRDGQKKRVFVYKFLTTGTIEEKVFQRQLAKEGLQQVV----------NNTAAAASARS----------DASDGAGIAAAAMSAEDLRDLFTLRLHTASDTFDSMCNGDSDEAADDNDEEDESSRAPAFPVDIHKDQVGAPAEEDLKSWGQHTSTSTVPD-SIMRTIGQELPGQVSFVFTCKVAGKAIEGEEAEEVPGTSGHNAAAAGTPVT 833          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A835ZHK9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK9_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.860e-13
Identity = 50/111 (45.05%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRR 111
            MARVWR GQTK V +YRL++TGTLEE IYQRQ+ KG L  ++                     G  K+ +K      G GR    FS EEL+DLF L+  ++SDT DKL R
Sbjct:  598 MARVWRFGQTKPVFIYRLITTGTLEEVIYQRQMLKGELSSVVD--------------------GGGKAGEKG---GGGRGRGTQQFSLEELRDLFALREDSASDTRDKLLR 685          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A2K1K7S9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7S9_PHYPA)

HSP 1 Score: 74.3 bits (181), Expect = 6.400e-12
Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRR 111
            +AR+WR GQ K V +YRL+STG++EE IYQRQI KG +                +A+++GD     K S            +G  FS+EELK+LF L   T+ DTFD + R
Sbjct:  949 IARIWREGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGM----------------SAAVEGDADVHTKKSN-----------IGRHFSKEELKELFTLNLATNCDTFDLISR 1032          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A7J6LRF7_PERCH (DNA repair and recombination protein RAD54-like n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LRF7_PERCH)

HSP 1 Score: 74.3 bits (181), Expect = 6.640e-12
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGG--FSQEELKDLFILKTGTSSDTFDKL 109
            MAR+WR GQTK   +YRL+STGT+EE I+QRQ+ K +L D++    D S+  ++T++I   ++    SS KN   +D   +  G   FS  +LK+LF+L+  T+SDT D L
Sbjct:  552 MARIWRDGQTKVCWIYRLLSTGTIEEKIFQRQMKKDSLSDIV--VQDDSAKDDYTSTIALPKAS-PTSSTKNNTSTDTEKKSAGSSMFSAAQLKNLFMLQEDTASDTLDTL 659          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A388LTD4_CHABU (Helicase C-terminal domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LTD4_CHABU)

HSP 1 Score: 73.9 bits (180), Expect = 8.660e-12
Identity = 50/130 (38.46%), Postives = 69/130 (53.08%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKL-RRRIPLLRLGDDAHEELSSP 129
            MARVWR GQ K+V +YR +STG++EE IYQRQI KG +   +             A+ DGDR  ++                G  F++EELK+LF L+T T+ DT+D L R R+P      D   ++  P
Sbjct:  545 MARVWRDGQQKDVVIYRFLSTGSIEEKIYQRQIVKGEVAAAV-------------AAKDGDRGSKK----------------GQHFTREELKELFQLQTETACDTYDLLYRSRMPHAMHWKDVSSDVIDP 645          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A7S0GZW4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GZW4_MICPS)

HSP 1 Score: 70.1 bits (170), Expect = 1.360e-10
Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRRRIPLLRLGD 120
            +ARVWR GQ + V++YRL+S GT+EE ++QRQI KGA+ +        + A +   ++ G  +G               G     FS+EEL+DLF    G + DT + LRRR     L D
Sbjct:  258 LARVWREGQQRPVTIYRLLSAGTVEEKVFQRQILKGAVANAAGYVGASADASSGEYNVAGPLTG--------------SGTNPNAFSKEELRDLFAFDPGATCDTAETLRRRGESCSLSD 363          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A2V0PHK1_9CHLO (DNA repair and recombination protein RAD54 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHK1_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 4.490e-10
Identity = 59/154 (38.31%), Postives = 74/154 (48.05%), Query Frame = 0
Query:    3 RVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRRRIPLLRLGDDAHEELSSPEFDRHDGSMSRK-GWREYNGPSDIADL 155
            RVWR GQ K V +YRL+S GT+EE ++QRQ+ K  L  L+  A     A      I G  SG           +DG G   G  S E+L++LF L+  T+SDTFD L      LR    A E+   P      GS S   GW E +G  D  D 
Sbjct:  704 RVWRDGQKKRVYVYRLLSAGTIEEKVFQRQVSKEGLQQLVDSA-----AGGGDVCIGGG-SGFG---------ADGGGASAGLLSAEQLRELFTLRADTASDTFDAL---FGDLRAASRARED--PPGVGGRSGSCSDSLGWCEDSGSGDDGDF 837          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A150H5N7_GONPE (Helicase C-terminal domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H5N7_GONPE)

HSP 1 Score: 67.8 bits (164), Expect = 5.560e-10
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 0
Query:    1 MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKL 109
            MAR+WR GQTK   +YRL++TGT+EE +YQRQ+ K  L                +A++ G               + G G+ GG F++EEL+ LF L T T+SDT D L
Sbjct:   78 MARIWRDGQTKPCFVYRLLTTGTIEEKVYQRQLMKADL---------------ASATMVG---------------AGGSGKSGGKFTREELRALFSLNTATASDTRDLL 156          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTI7_9PHAE7.380e-3141.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMS0_ECTSI1.860e-3043.84SNF2-related domain-containing protein n=1 Tax=Ect... [more]
A0A8J9RPJ2_9CHLO1.200e-1332.09DNA repair and recombination protein RAD54-like n=... [more]
A0A835ZHK9_9STRA2.860e-1345.05SNF2 family N-terminal domain-containing protein n... [more]
A0A2K1K7S9_PHYPA6.400e-1240.54Uncharacterized protein n=5 Tax=Physcomitrium pate... [more]
A0A7J6LRF7_PERCH6.640e-1243.24DNA repair and recombination protein RAD54-like n=... [more]
A0A388LTD4_CHABU8.660e-1238.46Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S0GZW4_MICPS1.360e-1036.67Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A2V0PHK1_9CHLO4.490e-1038.31DNA repair and recombination protein RAD54 n=1 Tax... [more]
A0A150H5N7_GONPE5.560e-1039.45Helicase C-terminal domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.850coord: 41..100
e-value: 4.4E-17
score: 64.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..110
e-value: 4.4E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 1..114
NoneNo IPR availablePANTHERPTHR45629:SF3DNA REPAIR AND RECOMBINATION PROTEIN RAD54Bcoord: 1..114
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig656contigF-serratus_M_contig656:271732..272349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig656.17530.1mRNA_F-serratus_M_contig656.17530.1Fucus serratus malemRNAF-serratus_M_contig656 270786..272380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig656.17530.1 ID=prot_F-serratus_M_contig656.17530.1|Name=mRNA_F-serratus_M_contig656.17530.1|organism=Fucus serratus male|type=polypeptide|length=206bp
MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSS
APNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTG
TSSDTFDKLRRRIPLLRLGDDAHEELSSPEFDRHDGSMSRKGWREYNGPS
DIADLALRRALHRESPGFGEDCDSVRGVSASAAASGPEVTFVREVKRGRV
ELVTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase