prot_F-serratus_M_contig6558.17520.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6558.17520.1
Unique Nameprot_F-serratus_M_contig6558.17520.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length513
Homology
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 345 bits (886), Expect = 1.210e-101
Identity = 206/383 (53.79%), Postives = 249/383 (65.01%), Query Frame = 0
Query:  132 PTARYFREPTHHDKADLDQVCRELRRVHLEGERK------ELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYEHQSALPTPAPCDQEDILATVAAGTKAEQARETKLNRLISAASVELAGDMASEACALAPGSLYLGGSARRRLAECFEKIDRQLK-GGAQGRVSFERSVGSGLSIDAVGDDPRTKEFYAYKEILEAAEEGATSGVVVGW--SEEKVERLTRM-RSVKPAATRILGRAAACEALSSVW 504
            PTARYF EPTHH+ A LD+VC ELRRV++   R       E  G   D G GRDRCVL  LLAMYPS+  GG    ASGV+LLSALEPMAVTPD MDYRHSWHLM VVEALGVAEV DR K AA+TEG+RFQL   GLWEWAVYVALT EG  DRR ATARE+V+RHG+ +LG  ++  D ER R L  L  P +WL+EA A+RAGYEH+SA+P+P    +E   A  A G+    A +TKL  L SA S ELA + A EAC +AP S++LGG     LAE   +I   ++ GG Q  +      G       VG     KEFYAYKEI+EAA E    G       S ++++RL RM R V+P+A+R+LG AAA + + + W
Sbjct: 1827 PTARYFLEPTHHESAHLDKVCTELRRVYMPPPRPPAGLSLEKSGG-EDRGYGRDRCVLRCLLAMYPSRKAGGGVGGASGVSLLSALEPMAVTPDVMDYRHSWHLMNVVEALGVAEVQDRAKAAAVTEGLRFQLVSVGLWEWAVYVALTAEGGPDRRAATARELVLRHGYRVLGAPVNSPDAERGRFLENLGIPGAWLHEAAAVRAGYEHKSAVPSPT-YPRESGSAVPAVGS----AHDTKLKLLTSAGSAELALEAAKEACMVAPSSMFLGGETLSLLAEKLGEIAWLVEEGGKQEEIGSLGGEGRKNGGAGVG-----KEFYAYKEIVEAAVEERAGGAAAALRRSRDEMDRLERMWRIVQPSASRVLGAAAAHQTMETFW 2198          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A7S2FW32_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW32_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.900e-17
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 0
Query:  169 GVVADTGTGRDR----CVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYEHQSAL 338
            G++   G GR      C+L  LL +Y     GG     +  A   A+ P AVTPD +DYRHSW L  V +AL +   P       IT+    QL   GLW+WAVYV + ++ D  RR A+ R +V+R G+       +  D+++   L EL  P  WL+EA A  +GY  +  L
Sbjct:    3 GLMGHGGGGRSLPKQGCILYHLLQLY----CGGDADGNAENATEQAMAPGAVTPDKLDYRHSWQLSTVFDALDLYPRPKE-SADRITDAFASQLIAVGLWKWAVYVYMHLD-DNTRRSASIRGLVLRFGW-------TDPDDKQYPTLSELQVPSVWLDEAIAYASGYSFKRDL 163          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: W5LX98_LEPOC (Nup96 domain-containing protein n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LX98_LEPOC)

HSP 1 Score: 84.0 bits (206), Expect = 7.050e-14
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 0
Query:  206 ALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 338
            +L   L+P  VT D +DYR SWHL  V++AL  + + ++ +   +      QLE AGLWE A++V L I  D  RRE   RE++  H      +      E+ + L   LH PV W++EA AIRA   G +H+ AL
Sbjct:  126 SLQQLLDPCTVTADRLDYRLSWHLWNVLQALNYSHLSEQCQ-GLLHASYAAQLESAGLWEMAIFVLLHIP-DTSRRERAVREMLNLH---CSLEETEDSAEKEQFLTERLHVPVQWIHEAKAIRACREGDKHREAL 256          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A8J7NW24_ATRSP (Nuclear pore complex protein Nup98-Nup96 (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NW24_ATRSP)

HSP 1 Score: 84.0 bits (206), Expect = 3.370e-13
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 0
Query:  206 ALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 338
            +L   L+P  VT D +DYR SWHL  V++AL  + + ++ +   +      QLE AGLWE A++V L I  D  RRE   RE++  H      +      E+ + L   LH PV W++EA AIRA   G +H+ AL
Sbjct: 1462 SLQQLLDPCTVTADRLDYRLSWHLWNVLQALNYSHLSEQCQ-GLLHASYAAQLESAGLWEMAIFVLLHIP-DTSRRERAVREMLNLH---CSLEETEDSAEKEQFLTERLHVPVQWIHEAKAIRACREGDKHREAL 1592          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A821P2J9_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821P2J9_9NEOB)

HSP 1 Score: 81.6 bits (200), Expect = 3.880e-13
Identity = 63/185 (34.05%), Postives = 92/185 (49.73%), Query Frame = 0
Query:  158 VHLEGERKELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRH-GFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 338
             +LE     L  + ADT + R R V   LL +Y  +             L   L+P +VTPD +DYR SWHL  V++AL    +  + +   +      QLE  GLW+WAV+V L +  D   REA+ RE++ RH       ++L+    + + L+ +L  P  W+ EA AIRA   G  H+ AL
Sbjct:   16 AYLEEHGLRLEAIDADTSSIR-RDVCFHLLKLYSDRCYD----------LRQLLDPRSVTPDPLDYRLSWHLWMVLQALNYRHLSGQSQ-GLLHASYAEQLETVGLWQWAVFVVLHVP-DAVIREASVRELLTRHCALRETPETLA----KEKFLVEKLLIPAEWIYEAKAIRARRDGDHHREAL 183          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: B3DLM1_XENLA (Nuclear pore complex protein Nup98-Nup96 (Fragment) n=1 Tax=Xenopus laevis TaxID=8355 RepID=B3DLM1_XENLA)

HSP 1 Score: 82.4 bits (202), Expect = 9.250e-13
Identity = 59/164 (35.98%), Postives = 84/164 (51.22%), Query Frame = 0
Query:  178 RDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 338
            RD CV   LL +Y  +             L   L+P +VTPD +DYR SWHL  V++AL    + +  +   +      QLE  GLWEWA++V L I      REA  RE+++RH   ++ +S     +E   L+H L  P  W++EA AIR+   G  H+ AL
Sbjct:  956 RDVCV--HLLKLYSERQYD----------LCQLLDPSSVTPDPLDYRLSWHLWMVLQALNYTHLSEH-RQGTLHASYAAQLENVGLWEWAIFVLLHIPHP-HVREAGVRELLIRHC--VVRESPESLAKENF-LIHRLCVPAQWVHEAKAIRSRRDGDRHKEAL 1102          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: UPI001CF2228C (nuclear pore complex protein Nup98-Nup96 isoform X1 n=3 Tax=Bufo TaxID=8383 RepID=UPI001CF2228C)

HSP 1 Score: 82.0 bits (201), Expect = 1.360e-12
Identity = 67/188 (35.64%), Postives = 95/188 (50.53%), Query Frame = 0
Query:  158 VHLEGERKELCGVVADTGT-GRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDR---LKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYE---HQSAL 338
             +LEG    L  + ADT    RD C    LL +Y  +             L   L+P +VTPD +DYR SWHL  V++AL    + ++   L  A+ TE    QLE  GLWEWA++V L +   V R E + RE++ RH    L ++     +E+  L+ +L  P  W+ EA AIRA  +   H+ AL
Sbjct: 1419 AYLEGHGLRLEAIDADTSAIKRDVCF--HLLKLYSDRCYD----------LRQLLDPRSVTPDPLDYRLSWHLWMVLQALNYTHLSEQSQGLLHASYTE----QLENVGLWEWAIFVMLHVPNAVIR-ETSVRELLNRHCT--LRETRETLTKEKF-LIEKLCIPAEWIYEAKAIRARRDEDHHREAL 1586          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A433PW47_9FUNG (Nuclear protein 96-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PW47_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 4.360e-12
Identity = 59/192 (30.73%), Postives = 87/192 (45.31%), Query Frame = 0
Query:  170 VVADTGTGRDRCVLNRLLAMYPSQSTGGXXXXASGVALLSALEPMAVTPDFMDYRHSWHL-MKVVEALGVAEVPDRLKVA--------------------------AITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEER----RRLLHELHTPVSWLNEADAIRA 330
            +V D  T + R +L  ++ +Y  ++ G          L  AL P  +TP  +DYR +WHL +   + L V +  DR  VA                          ++T  + FQLE  G+WEWAV+V L +EG  + R    R+IV RH        L P+ EE     + L+ +L  P+ W+ EA A RA
Sbjct: 1514 IVKDGATDQQRDILFHIIKLYTDKAHG----------LEQALAPRGITPSPLDYRLTWHLYLLFAKVLKVRDFADRWVVAEDVLDEESSTPEAMVTTQNGWSATADSVTASLAFQLETLGMWEWAVFVLLYLEG-AESRAIAIRDIVSRHL------PLEPKTEEEVQTEKFLVEKLKLPLQWIREAKAQRA 1688          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: A0A4W3IU68_CALMI (Nuclear pore complex protein Nup98-Nup96 n=3 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3IU68_CALMI)

HSP 1 Score: 80.1 bits (196), Expect = 5.490e-12
Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 0
Query:  211 LEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRA---GYEHQSAL 338
            L P  VT + +DYR SWH+  V++AL  + V ++ +   +      QLE AGLW WA+++ L I     RRE   RE++ RH   +  +    R+E  R   H L  P  W++EA A+RA   G  H+ AL
Sbjct: 1454 LSPGTVTEERLDYRLSWHVWAVLQALNYSHVSEKQQ-GLVHSSYAAQLESAGLWHWAIFILLHIPSS-QRRERAVRELLARHCPLVETEEWQRREEFLR---HSLAVPARWIHEAKALRAHRDGDAHREAL 1579          
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Match: UPI0014258FFA (nuclear pore complex protein Nup98-Nup96-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258FFA)

HSP 1 Score: 80.1 bits (196), Expect = 5.540e-12
Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 0
Query:  209 SALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAITEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDSLSPRDEERRRLLHELHTPVSWLNEADAIRAGYE 333
            S L P + T   MDYR SWHL +V+EAL  + +  +  +  +      QLE  GLW WAV+V L I  D  RRE + ++++ R       +  S ++   R LL EL  P  WL+EA A+RA YE
Sbjct: 1537 STLAPTSYTCYPMDYRLSWHLSQVLEALHYSHISQQ-DMCTLHTSYAAQLEALGLWHWAVFVLLHIPSD-RRRELSVKKLLCRQCTLKRSEETSRKE---RFLLEELQVPARWLHEAKALRAKYE 1656          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6558.17520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9B1_9PHAE1.210e-10153.79Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
A0A7S2FW32_9STRA3.900e-1736.21Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W5LX98_LEPOC7.050e-1438.24Nup96 domain-containing protein n=2 Tax=Lepisosteu... [more]
A0A8J7NW24_ATRSP3.370e-1338.24Nuclear pore complex protein Nup98-Nup96 (Fragment... [more]
A0A821P2J9_9NEOB3.880e-1334.05(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
B3DLM1_XENLA9.250e-1335.98Nuclear pore complex protein Nup98-Nup96 (Fragment... [more]
UPI001CF2228C1.360e-1235.64nuclear pore complex protein Nup98-Nup96 isoform X... [more]
A0A433PW47_9FUNG4.360e-1230.73Nuclear protein 96-domain-containing protein n=1 T... [more]
A0A4W3IU68_CALMI5.490e-1236.64Nuclear pore complex protein Nup98-Nup96 n=3 Tax=C... [more]
UPI0014258FFA5.540e-1239.20nuclear pore complex protein Nup98-Nup96-like n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021967Nuclear protein 96PFAMPF12110Nup96coord: 126..329
e-value: 1.8E-32
score: 112.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6558contigF-serratus_M_contig6558:24653..26730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6558.17520.1mRNA_F-serratus_M_contig6558.17520.1Fucus serratus malemRNAF-serratus_M_contig6558 14041..27096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6558.17520.1 ID=prot_F-serratus_M_contig6558.17520.1|Name=mRNA_F-serratus_M_contig6558.17520.1|organism=Fucus serratus male|type=polypeptide|length=513bp
MPPKLRWTLGCHGWPSCSRPRPRASAARCGMTRAGFSPSKWRCGRATEPT
PTCRRRRSSCTSCSDARVSGTLGSGELSARVRLASPFSRLAEAARSLLVV
RRGRSSRRRWWWGGRCGESLRVSGGRQRGNSPTARYFREPTHHDKADLDQ
VCRELRRVHLEGERKELCGVVADTGTGRDRCVLNRLLAMYPSQSTGGGGG
GASGVALLSALEPMAVTPDFMDYRHSWHLMKVVEALGVAEVPDRLKVAAI
TEGMRFQLECAGLWEWAVYVALTIEGDVDRREATAREIVVRHGFGLLGDS
LSPRDEERRRLLHELHTPVSWLNEADAIRAGYEHQSALPTPAPCDQEDIL
ATVAAGTKAEQARETKLNRLISAASVELAGDMASEACALAPGSLYLGGSA
RRRLAECFEKIDRQLKGGAQGRVSFERSVGSGLSIDAVGDDPRTKEFYAY
KEILEAAEEGATSGVVVGWSEEKVERLTRMRSVKPAATRILGRAAACEAL
SSVWDEAKIPEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021967Nup96