prot_F-serratus_M_contig6521.17510.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6521.17510.1
Unique Nameprot_F-serratus_M_contig6521.17510.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length36
Homology
BLAST of mRNA_F-serratus_M_contig6521.17510.1 vs. uniprot
Match: D7FPN5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN5_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 1.470e-6
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    1 MKNQVVALIGAVYYLRGPLVVLNALTCTIEIL 32
            MKNQVV LI AV YLRGPL+VLN+LTC I +L
Sbjct:   48 MKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 79          
BLAST of mRNA_F-serratus_M_contig6521.17510.1 vs. uniprot
Match: A0A835YX81_9STRA (Yos1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX81_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 8.070e-6
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 MKNQVVALIGAVYYLRGPLVVLNALTCTIEILLPG 35
            +KNQ + LI AV YLRGPL+ +N LTCT E+L  G
Sbjct:   44 LKNQAIGLINAVAYLRGPLIAINLLTCTFEMLFGG 78          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6521.17510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPN5_ECTSI1.470e-675.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YX81_9STRA8.070e-660.00Yos1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013880Yos1-likePFAMPF08571Yos1coord: 1..33
e-value: 1.8E-4
score: 21.7
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6521contigF-serratus_M_contig6521:28445..28552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6521.17510.1mRNA_F-serratus_M_contig6521.17510.1Fucus serratus malemRNAF-serratus_M_contig6521 28267..29316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6521.17510.1 ID=prot_F-serratus_M_contig6521.17510.1|Name=mRNA_F-serratus_M_contig6521.17510.1|organism=Fucus serratus male|type=polypeptide|length=36bp
MKNQVVALIGAVYYLRGPLVVLNALTCTIEILLPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013880Yos1