prot_F-serratus_M_contig6511.17505.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6511.17505.1
Unique Nameprot_F-serratus_M_contig6511.17505.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length78
Homology
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5KLE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE6_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 7.890e-19
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWV+ WK ++ G I+K KARLVA GF Q H VD+ ET++ T  A+S++LLVA+A K D EL  L I+Q F+
Sbjct:   58 NVIDARWVYKWKANETGKILKAKARLVAKGFKQKHGVDYFETFSPTAHAASIRLLVALACKYDLELLHLDIEQAFV 133          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.190e-19
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA+A K + EL  L I+Q F+
Sbjct:  189 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFV 264          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.200e-19
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA+A K + EL  L I+Q F+
Sbjct:  461 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFV 536          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.220e-19
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA+A K + EL  L I+Q F+
Sbjct:  525 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFV 600          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.220e-19
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA+A K + EL  L I+Q F+
Sbjct:  669 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFV 744          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.270e-19
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA+A K + EL  L I+Q F+
Sbjct:  875 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFV 950          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.320e-18
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVF 77
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA+A K + EL  L I+Q F
Sbjct:  256 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAF 330          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5L6C0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C0_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 2.660e-18
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H VD+LET++ T  A+S++L+VA A K + EL  L I++ F+
Sbjct:  222 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVAFACKYNMELLHLDIEEAFV 297          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 4.420e-18
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q + VD+LET++ T  A+S++LLVA+A K D EL    I+Q F+
Sbjct:  823 NVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFV 898          
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 5.910e-18
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    3 NVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPAASSVKLLVAIAVKNDWELRQLHIKQVFI 78
            NVI +RWVF WK D+ G I+K KARLVA GF Q H +D+L T++ T  A+S++LLVA+A K + EL  L I+Q F+
Sbjct:  210 NVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFV 285          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6511.17505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLE6_9PHAE7.890e-1953.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JP36_9PHAE9.190e-1955.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LDZ0_9PHAE9.200e-1955.26CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J594_9PHAE9.220e-1955.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE9.220e-1955.26CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K622_9PHAE9.270e-1955.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV80_9PHAE2.320e-1856.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6C0_9PHAE2.660e-1853.95Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JB16_9PHAE4.420e-1855.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KPV1_9PHAE5.910e-1853.95Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..77
e-value: 1.9E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 3..77
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6511contigF-serratus_M_contig6511:19862..20095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6511.17505.1mRNA_F-serratus_M_contig6511.17505.1Fucus serratus malemRNAF-serratus_M_contig6511 19862..20095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6511.17505.1 ID=prot_F-serratus_M_contig6511.17505.1|Name=mRNA_F-serratus_M_contig6511.17505.1|organism=Fucus serratus male|type=polypeptide|length=78bp
DVNVISSRWVFAWKVDKDGNIIKPKARLVASGFSQAHTVDFLETYAATPA
ASSVKLLVAIAVKNDWELRQLHIKQVFI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like