prot_F-serratus_M_contig650.17494.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig650.17494.1
Unique Name	prot_F-serratus_M_contig650.17494.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	94

Homology

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 8.030e-15
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 0

Query:   17 SWYLGCAFERDKE-AFFAHRIRAYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA ERD E        +AYI  +   +G+   ++ PA  +ADLGP+R+DEP  DKPVR  +G L+W +  TRPD
Sbjct: 1518 TWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPD 1596

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.760e-14
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0

Query:   17 SWYLGCAFERDKE-AFFAHRIRAYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA ERD E        +AYI  +   +G+   ++ PA  +A+LGP+R+DEP  DKPVR  +G L+W +  TRPD
Sbjct:  965 TWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPD 1043

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.100e-13
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 0

Query:   17 SWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E       + AYIES+   + V  ++ +PA+  ADLGP+R+DEP  DKPVR  +G L+W   +TRPD
Sbjct:  162 TWYDGCAIVMDVENGITKLSQTAYIESMLKRFDVTTIAFIPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPD 239

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5K2N9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.140e-13
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0

Query:   15 GLSWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            G +WY GCA   D E       + AYIES+   + V   +  PA+ +ADLGP+R+DEP  DKPV+  +G L+W   +TRPD
Sbjct:  334 GCTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATNADLGPKRDDEPAVDKPVKEAIGCLMWTK-LTRPD 413

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5L6D0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D0_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.890e-13
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0

Query:   17 SWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E       + AYIES+   + V   +  PA+  A++GPRR+DEP  DKPVR  +G L+W   +TRPD
Sbjct:   91 TWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAAADAEIGPRRDDEPAVDKPVREAIGCLMWAK-LTRPD 168

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 5.720e-13
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0

Query:   17 SWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E       + AYIES+   + V   +  PA+  ADLGP+R+DEP  DKPVR  +G L+W   +TRPD
Sbjct:   93 TWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPD 170

[Close]

BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JXE8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE8_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 5.860e-13
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 0

Query:   17 SWYLGCAFERDKE---AFFAHRIRAYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E   A  +H   AYIES+   + V   +  PA+  ADLGP+R+DEP  DKPVR  +G L+W   +TRPD
Sbjct:  245 TWYDGCATAMDVENGIAKLSHT--AYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAADKPVREAIGCLMWTK-LTRPD 322

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BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JHJ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 6.110e-13
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0

Query:   17 SWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E       + AYIES+   + V   +  PA+  ADLGP+R+DEP  DKPVR  +G L+W   +TRPD
Sbjct:  140 TWYEGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPD 217

[Close]

BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JUE2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.100e-12
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0

Query:   17 SWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E       + AYIES+   + V   +  PA+  ADLGP+R+DEP  DKPVR  +G L+W   +TRPD
Sbjct:  222 TWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPD 299

[Close]

BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Match: A0A6H5JFZ2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFZ2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.120e-12
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0

Query:   17 SWYLGCAFERDKEAFFAHRIR-AYIESVASHYGVDAVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD 94
            +WY GCA   D E       + AYIES+   + V   +  PA+  ADLGP+R+DEP  DKPVR  +G L+W   +TRPD
Sbjct:  464 TWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPD 541

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig650.17494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L175_9PHAE	8.030e-15	45.57	Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JKS3_9PHAE	2.760e-14	44.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXU1_9PHAE	2.100e-13	45.57	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K2N9_9PHAE	4.140e-13	44.44	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5L6D0_9PHAE	4.890e-13	44.30	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JE75_9PHAE	5.720e-13	45.57	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JXE8_9PHAE	5.860e-13	46.91	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JHJ1_9PHAE	6.110e-13	45.57	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JUE2_9PHAE	1.100e-12	45.57	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JFZ2_9PHAE	1.120e-12	45.57	Reverse transcriptase Ty1/copia-type domain-contai...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig650	contig	F-serratus_M_contig650:270535..270816 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig650.17494.1	mRNA_F-serratus_M_contig650.17494.1	Fucus serratus male	mRNA	F-serratus_M_contig650 270468..270816 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig650.17494.1 ID=prot_F-serratus_M_contig650.17494.1|Name=mRNA_F-serratus_M_contig650.17494.1|organism=Fucus serratus male|type=polypeptide|length=94bp
MIVCLFDEFQTTREGLSWYLGCAFERDKEAFFAHRIRAYIESVASHYGVD
AVSNLPASQSADLGPRRNDEPVCDKPVRATVGSLIWLSGMTRPD