prot_F-serratus_M_contig650.17493.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig650.17493.1
Unique Name	prot_F-serratus_M_contig650.17493.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	122

Homology

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.360e-37
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0

Query:    1 DDVPGVVYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAKGGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            DD  GV  A+T +A+ WHR L H+N RSMELLR+KE NGV+++ +++ CDICA+SKSRQ AHP+K+ R TT PM+L+YTD  G  TP AKGG+ YVSK+ D  S MKE+YLL+  SE   +L
Sbjct:  295 DDDLGVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRAL 416

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.550e-36
Identity = 67/118 (56.78%), Postives = 91/118 (77.12%), Query Frame = 0

Query:    5 GVVYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAKGGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            GV +A+T +A+  HRRLGH+N RSM+LLR+KE N V+++ +++ CDICA+SKS Q AHPKK++R TT PM L+YTD+ G  TP AKGG+ YVS + D  SR+KE+YLL+ KSE   +L
Sbjct:   97 GVAFATTVNANTPHRRLGHLNFRSMKLLRKKEENEVDFSDSMTPCDICAISKSTQLAHPKKTSRETTAPMLLVYTDIMGKTTPLAKGGFGYVSMFNDAYSRIKEIYLLKAKSETVRAL 214

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.460e-32
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0

Query:    7 VYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAK---GGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            V  +   AD WHRRLGH+N RS+++LR+  G GV+Y  ++S C +C ++K +Q  HPK+STR  +RP +L+  D  GP+ PPAK   G + Y  K  DD ++MKEVYLLR KS+  E++
Sbjct:   35 VCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAV 153

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5KP59_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP59_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.430e-31
Identity = 59/119 (49.58%), Postives = 81/119 (68.07%), Query Frame = 0

Query:    7 VYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPA--KGG-YRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            V  +   AD WHRRLGH+N RS+E+LR+  G GV+Y  ++S C +C + K +Q  HPK+STR  +RP +L+  D  GP+ PPA  KGG + Y  K  DD ++MKEVYLLRNKS+  E++
Sbjct:  299 VCFTLVSADTWHRRLGHLNARSLEILRKDTGTGVDYRDSLSPCGVCQIGKHKQSPHPKQSTRELSRPGQLVVIDSMGPVNPPAYYKGGSFPYACKITDDYTKMKEVYLLRNKSDTTEAV 417

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.710e-31
Identity = 51/109 (46.79%), Postives = 80/109 (73.39%), Query Frame = 0

Query:   14 ADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAKGGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            A +WHRR+GH++ RS+++LR+ +GNGVEY G +S CD+CA+  S+QQ HPK+++   +RP +L+ TDL GP +PPA GG+ Y+ K+ D   +  EV+L++ KS   ++L
Sbjct:  266 AALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDAL 374

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5K9M6_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 8.590e-31
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0

Query:    7 VYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAK---GGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            V  +   AD WHRRLGH+N RS+++L +  G  V+Y  ++S C +C ++K +Q  +PK+STR  +RP +L+  D  GP+TPPAK   G + Y  K  DDC++MKEVYLLR KS+  E++
Sbjct:  142 VCFTLVSADTWHRRLGHLNARSLDILTKDTGTRVDYRDSLSPCGVCQIAKHKQSPYPKQSTRELSRPGQLVVIDNMGPVTPPAKYKGGSFAYACKITDDCTKMKEVYLLRKKSDTTEAV 260

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BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.120e-30
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0

Query:    7 VYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAK---GGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            V  +   AD WHRRLGH+N RS+++LR+  G GV+Y  ++S C +C ++K +Q  HPK+STR  +RP +L+  D  GP+ PPAK   G + Y  K  DD ++MKEVYLLR KS+  E++
Sbjct:   35 VCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAV 153

[Close]

BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5JY69_9PHAE (Peptidase A2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY69_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 3.260e-30
Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 0

Query:    9 ASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAKGG---YRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            A +  AD+WHRRLGH+NPR+ME+LR+    GV+Y G VS CD C ++K ++   PKK++R  T+P +L+  D  GP+ PPAK     Y YV+K  D  +RM+EVYLLR+++E  ++L
Sbjct:  187 AMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCHITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKAIDIFTRMREVYLLRHRTETTQAL 303

[Close]

BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.360e-30
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0

Query:    7 VYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAK---GGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            V  +   AD WHRRLGH+N RS+++LR+  G GV+Y  ++S C +C ++K +Q  HPK+STR  +RP +L+  D  GP+ PPAK   G + Y  K  DD ++MKEVYLLR KS+  E++
Sbjct:  411 VCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAV 529

[Close]

BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.640e-30
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0

Query:    7 VYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCDICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAK---GGYRYVSKYADDCSRMKEVYLLRNKSEAAESL 122
            V  +   AD WHRRLGH+N RS+++LR+  G GV+Y  ++S C +C ++K +Q  HPK+STR  +RP +L+  D  GP+ PPAK   G + Y  K  DD ++MKEVYLLR KS+  E++
Sbjct:   35 VCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAV 153

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig650.17493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JYD3_9PHAE	1.360e-37	57.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JT61_9PHAE	1.550e-36	56.78	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KZ34_9PHAE	1.460e-32	47.06	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5KP59_9PHAE	1.430e-31	49.58	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5K1J1_9PHAE	2.710e-31	46.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K9M6_9PHAE	8.590e-31	46.22	gag_pre-integrs domain-containing protein n=1 Tax=...	[more]
A0A6H5KCM0_9PHAE	2.120e-30	47.06	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5JY69_9PHAE	3.260e-30	47.86	Peptidase A2 domain-containing protein n=1 Tax=Ect...	[more]
A0A6H5KT84_9PHAE	3.360e-30	47.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K500_9PHAE	3.640e-30	47.06	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 9..57 e-value: 2.8E-9 score: 36.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 63..122 e-value: 6.9E-7 score: 30.6
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 11..119
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 11..119
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 69..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig650	contig	F-serratus_M_contig650:179213..179578 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig650.17493.1	mRNA_F-serratus_M_contig650.17493.1	Fucus serratus male	mRNA	F-serratus_M_contig650 179213..179578 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig650.17493.1 ID=prot_F-serratus_M_contig650.17493.1|Name=mRNA_F-serratus_M_contig650.17493.1|organism=Fucus serratus male|type=polypeptide|length=122bp
DDVPGVVYASTADADIWHRRLGHMNPRSMELLRQKEGNGVEYTGTVSDCD
ICALSKSRQQAHPKKSTRTTTRPMKLIYTDLTGPLTPPAKGGYRYVSKYA
DDCSRMKEVYLLRNKSEAAESL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025724	GAG-pre-integrase_dom
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf