prot_F-serratus_M_contig65.17475.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig65.17475.1
Unique Nameprot_F-serratus_M_contig65.17475.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length269
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig65.17475.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.240e-47
Identity = 109/271 (40.22%), Postives = 142/271 (52.40%), Query Frame = 0 
Query:    1 MSGPPLPEFWTEEIDGKGRRFYSNHRTKSTHWERPA---PPADLVVPPPYSAIAPVQRQVQHARQPPPPRKNACLTCTPRVTFWVSAALVPVVWAFAVWATADDNW--FASVPLAVVDEDILGQCTIEDDSYADVNEFCELYVSFVAMQLIATLMVSIACVLLGVALCRPAVGC-CCSTTALGFGSGFVLALFAFFQLLXXXXXXXIENEESVAVYYSDDLQNDHDPNIGITFWGGAIGFVMAMFEGGILLTFAGSAGDGPLYAIAHRLMS 265
            MS PPLPEFWTEE D KGR ++SNHRT+ T WERP    P     +PPPY   A           P   R   C  CTPR+TFW+S AL  V+W FAV A+ADD W       +   DEDIL  C   DD        C LY +F AMQ IA ++VS++ VL  +AL RPA G  CCS  +L   +G ++  FAFF++L       IE E               + ++G TF    +  V+ + +   +LTFA S+GDGP +   +  M+
Sbjct:    1 MSAPPLPEFWTEEKDAKGRTYFSNHRTQETTWERPVASVPQRGPDLPPPYGGNA---AHCAAVAAPQAARSGPC--CTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFDIGAGDEDILDDCDSSDD-------VCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFNTGFGFG---EADLGATFGLAVVAVVLGVVQAVSVLTFARSSGDGPFFKCLNECMA 256
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJK8_9PHAE1.240e-4740.22WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 5..37
e-value: 1.7E-7
score: 40.9
IPR001202WW domainPFAMPF00397WWcoord: 6..35
e-value: 9.0E-7
score: 28.9
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 4..37
score: 15.506
NoneNo IPR availableGENE3D2.20.70.10coord: 2..36
e-value: 1.4E-10
score: 43.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 240..268
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..201
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 4..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig65contigF-serratus_M_contig65:550973..553389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig65.17475.1mRNA_F-serratus_M_contig65.17475.1Fucus serratus malemRNAF-serratus_M_contig65 543544..554571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig65.17475.1 ID=prot_F-serratus_M_contig65.17475.1|Name=mRNA_F-serratus_M_contig65.17475.1|organism=Fucus serratus male|type=polypeptide|length=269bp
MSGPPLPEFWTEEIDGKGRRFYSNHRTKSTHWERPAPPADLVVPPPYSAI
APVQRQVQHARQPPPPRKNACLTCTPRVTFWVSAALVPVVWAFAVWATAD
DNWFASVPLAVVDEDILGQCTIEDDSYADVNEFCELYVSFVAMQLIATLM
VSIACVLLGVALCRPAVGCCCSTTALGFGSGFVLALFAFFQLLVLVLVIA
IENEESVAVYYSDDLQNDHDPNIGITFWGGAIGFVMAMFEGGILLTFAGS
AGDGPLYAIAHRLMSSKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf