mRNA_F-serratus_M_contig65.17475.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig65.17475.1
Unique NamemRNA_F-serratus_M_contig65.17475.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig65.17475.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.780e-43
Identity = 109/271 (40.22%), Postives = 142/271 (52.40%), Query Frame = 2 
Query:  143 MSGPPLPEFWTEEIDGKGRRFYSNHRTKSTHWERPA---PPADLVVPPPYSAIAPVQRQVQHARQPPPPRKNACLTCTPRVTFWVSAALVPVVWAFAVWATADDNW--FASVPLAVVDEDILGQCTIEDDSYADVNEFCELYVSFVAMQLIATLMVSIACVLLGVALCRPAVGC-CCSTTALGFGSGFVLALFAFFQLLXXXXXXXIENEESVAVYYSDDLQNDHDPNIGITFWGGAIGFVMAMFEGGILLTFAGSAGDGPLYAIAHRLMS 937
            MS PPLPEFWTEE D KGR ++SNHRT+ T WERP    P     +PPPY   A           P   R   C  CTPR+TFW+S AL  V+W FAV A+ADD W       +   DEDIL  C   DD        C LY +F AMQ IA ++VS++ VL  +AL RPA G  CCS  +L   +G ++  FAFF++L       IE E               + ++G TF    +  V+ + +   +LTFA S+GDGP +   +  M+
Sbjct:    1 MSAPPLPEFWTEEKDAKGRTYFSNHRTQETTWERPVASVPQRGPDLPPPYGGNA---AHCAAVAAPQAARSGPC--CTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFDIGAGDEDILDDCDSSDD-------VCSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFNTGFGFG---EADLGATFGLAVVAVVLGVVQAVSVLTFARSSGDGPFFKCLNECMA 256
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJK8_9PHAE1.780e-4340.22WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig65contigF-serratus_M_contig65:543544..554571 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionWW domain
Ec32 orthologEc-05_002920.1
Exons7
Model size2131
Cds size807
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932008.5434124-UTR-F-serratus_M_contig65:543543..5436101622932008.5434124-UTR-F-serratus_M_contig65:543543..543610Fucus serratus maleUTRF-serratus_M_contig65 543544..543610 +
1690964100.2268791-UTR-F-serratus_M_contig65:543543..5436101690964100.2268791-UTR-F-serratus_M_contig65:543543..543610Fucus serratus maleUTRF-serratus_M_contig65 543544..543610 +
1622932008.5630147-UTR-F-serratus_M_contig65:550897..5509721622932008.5630147-UTR-F-serratus_M_contig65:550897..550972Fucus serratus maleUTRF-serratus_M_contig65 550898..550972 +
1690964100.238803-UTR-F-serratus_M_contig65:550897..5509721690964100.238803-UTR-F-serratus_M_contig65:550897..550972Fucus serratus maleUTRF-serratus_M_contig65 550898..550972 +
1622932008.6986418-UTR-F-serratus_M_contig65:553389..5545711622932008.6986418-UTR-F-serratus_M_contig65:553389..554571Fucus serratus maleUTRF-serratus_M_contig65 553390..554571 +
1690964100.3262298-UTR-F-serratus_M_contig65:553389..5545711690964100.3262298-UTR-F-serratus_M_contig65:553389..554571Fucus serratus maleUTRF-serratus_M_contig65 553390..554571 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932008.5831137-CDS-F-serratus_M_contig65:550972..5510711622932008.5831137-CDS-F-serratus_M_contig65:550972..551071Fucus serratus maleCDSF-serratus_M_contig65 550973..551071 +
1690964100.2478023-CDS-F-serratus_M_contig65:550972..5510711690964100.2478023-CDS-F-serratus_M_contig65:550972..551071Fucus serratus maleCDSF-serratus_M_contig65 550973..551071 +
1622932008.5979428-CDS-F-serratus_M_contig65:551432..5514951622932008.5979428-CDS-F-serratus_M_contig65:551432..551495Fucus serratus maleCDSF-serratus_M_contig65 551433..551495 +
1690964100.2677217-CDS-F-serratus_M_contig65:551432..5514951690964100.2677217-CDS-F-serratus_M_contig65:551432..551495Fucus serratus maleCDSF-serratus_M_contig65 551433..551495 +
1622932008.6156337-CDS-F-serratus_M_contig65:551864..5519901622932008.6156337-CDS-F-serratus_M_contig65:551864..551990Fucus serratus maleCDSF-serratus_M_contig65 551865..551990 +
1690964100.2776184-CDS-F-serratus_M_contig65:551864..5519901690964100.2776184-CDS-F-serratus_M_contig65:551864..551990Fucus serratus maleCDSF-serratus_M_contig65 551865..551990 +
1622932008.631719-CDS-F-serratus_M_contig65:552332..5524531622932008.631719-CDS-F-serratus_M_contig65:552332..552453Fucus serratus maleCDSF-serratus_M_contig65 552333..552453 +
1690964100.2869694-CDS-F-serratus_M_contig65:552332..5524531690964100.2869694-CDS-F-serratus_M_contig65:552332..552453Fucus serratus maleCDSF-serratus_M_contig65 552333..552453 +
1622932008.6519623-CDS-F-serratus_M_contig65:552686..5529021622932008.6519623-CDS-F-serratus_M_contig65:552686..552902Fucus serratus maleCDSF-serratus_M_contig65 552687..552902 +
1690964100.296319-CDS-F-serratus_M_contig65:552686..5529021690964100.296319-CDS-F-serratus_M_contig65:552686..552902Fucus serratus maleCDSF-serratus_M_contig65 552687..552902 +
1622932008.676253-CDS-F-serratus_M_contig65:553207..5533891622932008.676253-CDS-F-serratus_M_contig65:553207..553389Fucus serratus maleCDSF-serratus_M_contig65 553208..553389 +
1690964100.3130903-CDS-F-serratus_M_contig65:553207..5533891690964100.3130903-CDS-F-serratus_M_contig65:553207..553389Fucus serratus maleCDSF-serratus_M_contig65 553208..553389 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig65.17475.1prot_F-serratus_M_contig65.17475.1Fucus serratus malepolypeptideF-serratus_M_contig65 550973..553389 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig65.17475.1

>prot_F-serratus_M_contig65.17475.1 ID=prot_F-serratus_M_contig65.17475.1|Name=mRNA_F-serratus_M_contig65.17475.1|organism=Fucus serratus male|type=polypeptide|length=269bp
MSGPPLPEFWTEEIDGKGRRFYSNHRTKSTHWERPAPPADLVVPPPYSAI
APVQRQVQHARQPPPPRKNACLTCTPRVTFWVSAALVPVVWAFAVWATAD
DNWFASVPLAVVDEDILGQCTIEDDSYADVNEFCELYVSFVAMQLIATLM
VSIACVLLGVALCRPAVGCCCSTTALGFGSGFVLALFAFFQLLVLVLVIA
IENEESVAVYYSDDLQNDHDPNIGITFWGGAIGFVMAMFEGGILLTFAGS
AGDGPLYAIAHRLMSSKR*
back to top

mRNA from alignment at F-serratus_M_contig65:543544..554571+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig65.17475.1 ID=mRNA_F-serratus_M_contig65.17475.1|Name=mRNA_F-serratus_M_contig65.17475.1|organism=Fucus serratus male|type=mRNA|length=11028bp|location=Sequence derived from alignment at F-serratus_M_contig65:543544..554571+ (Fucus serratus male)
CTCGCCCGTCTCACCCACTTCTCTCCAAGACTGATCGGGAGGCCGTGCGG
ATTCGATTACAAAAGAGGTGTGTATGGACgGGGGGGTTGCGCTCCGTGAG
AGAGTCTCGCTACTCTCGTCGTTGAGAACAAGGACCACGTGCTCGATGTA
GATGAGCTTCACAAGTCGTGTACGCCGCACCTGTTGCCTTCTTTCAGCAC
GGCAAATCTACGGTACTAAAGTACACAGTACAGATGTCGTACTTGCAGTT
GCAAGCCATCTTGTCACCTCATGAACTATTTTTCTTGCTCAGCTTTGATG
TGTATGTGTTATAAGGACGTCGACGCCAGTGTGATAAGGTAAGCTATTTC
ACCACAGGGTAAAAGTCATTTGACGATTATACGTATCGGTAATCAGTCCT
CATAACATATGGATCATTATTTATCACAGCAGAGCATAGATCAGCCGGGT
ATGGTTGCCAATCCTGTTTTTCCGCTATCCCCGTTCGCTCCTGAGAATTT
GGTCTCGCGAGACAGGGCCGTCCGTTCCGTCCTGTGTCAGCCTGCTCATT
CTCACGATAGATAATAGGTTGTCTTGGTCTATCCCTCCGCAAAGTCAGGA
AATGTTTGAGTCATTTTGGATAATAGATAGTCAGCGCCACACTGTTCTCT
CTATCTTGTAATTCGATCTGTACAACAACCCGATTAAATACCTTGCAATG
GCTTTGTAATTAATAACTTTTGTACTATGTAAGATCACTACTACCATCTG
TGAGGGAGTACTACATGTCTGTGGGTTATTCTTAATGTTTTTCTGGTGTC
CCTGCATGGCGATTAATGTAAATGTACAGTATAACGGTGGGCTTCTCCCG
GGGACATTATACTGTTGACCCAATGTTACTTGCATCGGGGAACCTGTTTA
AATACCATGAAGACATTTTGTACTTACAGCCTTTGATCCCACTGGAGGAT
GCTGAAAAGGTCTAGACTGGTGCTGTTCTGATTTTCTTTAAACAGCACTC
CAGACAGTTTATTTTTTTATTTTTGTGTACATGTATGTCGCGATTTGGAT
CCCTGTGGGTTCGAGGAGCGGGCTGTCACCATAATGTGACTCGTTGATCT
TCGTACCTCGTGACCACGAGCGGGATTGTTATTTTTTAAAGAAAACCAGA
ACGCGCCTATACCCTCTGAGCATCCTCCAGTTTTTGTTGTATTCTGGATT
GACATTCACCAAATAAACTACACTGAACGTGCGAATCAGTAAAAAAAAAC
AGTCTCTACCTGGTACGGTACATCGTAACAACTTTCCGAACATGATACGG
CTCAAAAGCTACGATACCACACCCTTCCTTTTAAAAACCGCTTGCTACGA
CCACCAATCACGACAATCTCAAGACCGCGTATATTTTACAGTTACGTATC
ACGATAAACGAACGTGGAGGTCTGTTGAGACACTGCCGCTGTCCAACGAC
CCGGCAGCCAGCAGATCGTTCCTTTATTTGTAAAGCATGAAGTACCTGAG
CTACTAATATAATACCACTGTAAATATTAGGAAATGGCTATTTGCCCCAC
CGGTGGGCCATACCCAAATTTACCCCACCACCTAGATCTCGCGTCAGAAG
ACACGGTTGGTCACAGTATATGCATGAGTGTGTTGGCGCGTTGTAGGGCT
ATCGTAGGGTCTATCGTGCAGCCCAAACGGTCCTGTCTACGTGATGTTAC
GGCCGGTGGGGTGGTTGGTGTTTTCTGGTATGTACTCAGGCAAATAGTCA
TACATACCAGAAAACACCAACCACCCCACCGGCCGTAACAGCACGTAGAC
AGGACCGTTTGGGCTGCACGATAGACCCCATGATAGCTAACCCTAACCCT
AACACACCCATGCATGTACTGTGACCAACCAAGTCTTCTGACGCGAGATC
CAGGTGGGGGGGTAAACAAGAGACTTATGGGGTCTATCGTGCAGCCCAAA
CGGTCCCGTCTACGTGCTACCACGGCCGGTGGGGTGGTTGATGTTTTCTG
GTATGTATGACTATTTGCCCTTACATACCAGAAAACACCAACCACCCCAT
CGGCCGTAACATCACGTAGACAGGACCGTTTGGGCTGCACGAATGACCCC
ATGATAGCCCTGCAACGCGCCAACACACTCGTGCATGTATTGTGACCAAC
CGTGTCTTCTGACGCGAGATCCAGGTGGTGAGGTAAATTTGGGTATGGCC
CACCGGTGGGGCAAATAGCCATTCCCACGATGTTTGTTGGGATCTTGTTA
CGCGAATCCTTCTACAGGTATTTCATAAGACCAGACTCTCAGGCACGTAC
GGGGACAGGGAAATATCATTTTCCCTGTCCAGCTGACCACGAGCAGGATT
GGCAACCTTCACCCGGATGATCCATACTCTGCTATACATGTGATGACTAT
AAACTACATACATACTACATATATACATAGCTACCTAGACTACATACTGT
GCGCATGTCGGAGCAATCAAATACGAAAACAAGCACAGGCACATGCGAGT
ACGTGGCTGCTCTGCCTGCGAACTCCGCCATAGACGCAGTTCTCCTGCGG
GTGTGCCGGGAAGGTTTGGGTCCGTGCAGTACAAATTTTTCTGTCAACTC
TCCGCTAAGCCCAAGGTTGCTTTTTTGCGGCGGTTTCTGTGGGCTTCGAT
TTTGTCGGATACGCACTGATGCtCGTTCATGGTCTTGCTTACCGTACGTG
TCTTTtaaagaaaaaTCTTGATCTACCGTATTCTATAATGTTTGTACCTT
TGCCGTCTGTACGTCAGCCAGTAGTATTTTGCTCCTAAACAACCACCGAC
AGCATTGTAAACAGCCAGTACAGATTGCACGAGACCTGTCAGCCGGAGAA
GAACCAAACCGCTCTTTCTCCGGGTGTTGTTTAAAGAAAATCAGAACAGC
ACCTAGACCTTTTGAGTTGTTGTTGCTGTCTTCATATAAAAAAAAAAGGG
TATGGCTATTTGGCCCACCGGTGGGCAATTCTCTCGTTTACCCCCCCACC
TGGATCTCGCGCCAGAAGGCTTGGTTGGTCACAGTACATGCATGGGTGTG
TTAGGGTTAGGGTTAGCTATTATCTGGTCTATCGTGTAGCCCAAATGGTC
CTGTCTACGTGATGTTACGGCCGGTGGGGTGGTTTGTGTTTTCTGGTATG
AAAGGGCAAATAGCCATACATACCAAGAAACCCCAACCACCCCACCGGCC
GTGGTAGCACGTAGACAGGACCGTTTGGGCTGCACGATAGACCAGATAAT
AGCTAACCCTAACCCTAACACACTCATGCATGTACTGTGACCAACCAAGT
CTTCTGGCGCGAGATCCAGGTGGGGGGGTAAACGAGAGAATTGCCCAGCA
CCGGTGGGCCAAATAGCCATACCCCAAAAAAAAACATTTTGACCCCTCTC
CAGTATCTTCTCTTTGTTACTCTTCAAGGGCAAAGAATTGATGTCCCTGT
ATCGAGTTTATCTGTTTGAAGAAAATACAGAACGCACCTAGACCTTCTGA
GCGTTTATCTGTTGTTACATTCTTCACATTAACCGATCGGGCCTCAACCA
TACCTAGTAATATACGTGGTTGCCAATCCGGTACGTGGCCACAAAGAGGT
ACAAAGGTCAACGGGCCACATCATCATGGTGACAACCCGCTACTCAGACC
AACAGGGATCCAAATCGCGACAAAAAGTTATGCGACTCTACAATCGATGG
CACCGACCAAACAAATCGCTTCATCAAACATCCTTACTCCATATCGAGAG
CAACCTCGATCGACTCGGATTGTTATCGCCTACCCACGACCAGCGTTCTC
AGCAAAAAAACGGAAGAATTACGCTCCAACCAGTTTTGATCAACAAAAAG
TCCAAGTTTCTCAAGGCCACACAATCGTACAGAAATAAGGAAAATTGAAA
TACCGAGGCCTATGGTGGTGGAGGCCTTGAGCTGGTGAAGCCGGCGCGCG
AGCCAGTATCTCGCCGTCCGAAGCCCTGTGCATCCCTGAAAAAAGCCCCA
CGAATCTTGCCCGTTCGCCGCTCCTTGTGGCCCTCGTGGGAAGAAAAACG
ACCGTGGTCAGATGTCAGCTTTTCCTCAGAAACCTCCCGGTTCACGCCTG
TGATTCTCGCGCACAGGGGTTCGGCCCTCCCCTGGCTCGTCGACGATCGA
GCTGCCCTCCGCCTTCGCCTAATCTGGTGCGTACCCACCCGGTAGAGCAC
TACCAGGCTCTCCGCGACAATGCTCCCTGCCTCTCGCGTGCCGCCACCCT
CCCGAAGGCCACCAAATTGAGGCTCGGAAGAGGCGCACACCTGGGAACAC
CATCACTTTCAGCCAACCATATCGCCGCCGCGTCTCAACGTACAGGCTGA
ATCGCGAAGGCAGCCAGTTGGCTGCACCTCTTGAGGGTGAGTCCGGCCCT
ACACCCGCCGGAAAGACCCTCCTACACTCATACCCCGAAACCAGGTTTCG
GAGGGAGAGGGCACGAGGCGATCTATCCTGGTATGAATAGTACTTTATAG
TATGTCTACGAGTACAGAATAATGACCGTGATAATGCTACTGTTGACCCG
ATGCGACTCCATTGGGGAGCCCGACCAAACGCCGTGTGGAGTTACGCCTC
CGATGCTTGCTGCATTAAACATGTCCACCACCGGTCGCCCCGGTGGTTCA
GTTGGTAACCTCGAAACCTTCTGACGTTGAGACGTGAGTTCGAATCCCGG
TGCAGTCACACGAACTGGGATGTTTCCTCACAAAAAAAAAAAAAAAAAGT
CCAGCAGGTAACGAACAGTTAGTCTAGACTAATTCGTTACACTCAAAATT
CGATATACTTGCACGGTCCACGAGGGAAAAGGAACGGCCGAATCCTTCTC
GCGAGAAAATTAAGGCAAGCACCGCAGAAGGAAGGTCGATGAGAAATTCT
GTATGGCCTTCCTCCTGTGTGACCCCGGCTGGTACATCCATGGTGTGACA
CCTGATAAGGGAGCTTCCGTTACTGGAACTACCTTGAGGACTACTGGCCC
TGTACCAGCGGAGTCTCGGCAGTGAACGCCGTCGGTACGCAGTTGGAAGA
TCTGATAAACTCGGGACTGACCCGATGGCGGATGGCGGTATAAATGAATG
ATGGGCGCCACCGCGGAAATCGGGAGGAATCCCGTGAGTAAGCACCAAAT
TTATCCGGAGTGTGGAGAATGAGCAGGCTGACGCGGGACGAGACCGGCGA
ACCTATCTCGCGAGACCAAATTCTCGGTGCGAACGGGGACAGAGAAATAT
TAATTTTCCCTGCTCAGCTGACCACGAGCAGGATTGGCAACCTCACCCGG
TTGATCCATACTCTGCTAAAAATGATAACATATACATTCATAAATATATA
CATACTGTACTTGTGGAGCTATTCGTGCCTCAGGGATGGTTGCCCCGCCC
AATTACCTCGGTAACTAGAGACAGTAGTAAAACCACCTGGTACATTAACC
TCAAGAAAGCACGCTGGAACCTGTGTGAAGATCGTGACCGCCCACAAGGC
CATAAACCCTAGGCTAAAGTACTTGGTCTGAAAAGTGCAGGGTATATCGC
CTTCTTAAGGGAGACAAAAGATGTGTCTCGCTGTCTACAATATACCCGCC
GAAAATAGTGATCTCCTGAGCGCTACCCTAGCCACGATCTCGTACCTACC
AGCAGGGCCCATGACAAGAGGTGGCTCATGAGTAATCTAGGGATCATCAC
CTTGTAAACGGACGAGTCGAAGTCGGCGGGTTTGAGTCGAAGTCATGCGC
TTCCCGAACGCCTACCGTGCGTAGTGGTGTACGGCCTCCTGAGGTGCGTT
CTGTAAAATGTGTTGTCTTCCGAGAAGATGGAACCATGTCCCTTCGGCAA
AAGGAGACTGCGCCAGAAAAAAAAATCTACCCGAGCGTCCATCGCAATAA
TGTAGCTTCAGATCCCCGTAGCTTGGAGCGCGCAAGCTGGCTCTGCCCTA
GCGATAACGTCTTCTTGTTCTCTTAACATCATATTGTCGAACTGTACTGT
ACTGTACTGTACTGTACTGCATTGCACACGGCGCTATTACTAGTACCGCA
AGACATTTTCTCAAAAGCTTATACCGTACCGTACAGTACGGGTGTGGTTC
TTCGCTTCCTGCGCATCGGGGCAATCAGCTTTGCAGATTACCCCCTTCAA
CTCTTTCGTTGCAATCCCGCCTGTGCATCACAGAGAGGATCTACGCGGTA
CCCAGCTCTTCTAAGGGTACGTACTCGTGCGAGCTTAGGGTTTGGTCGTC
GGGTAGCTTTTCGGCCTTCTCGACACCTGGTCAAATAATGATGTTTGTTT
TCCCCTCAAAATCGCTCACGCCTTCACGTTTTCCGCATTTCTATACCCGT
TGTAATGATAAAATCACTCACAGACTCCGCAAAGCTACGATATATAGGCA
TCTCGGAGTGCAATGACAGAACCCTCCTCTCGATTCTGGCCAGTCGTTAG
TCCTCCCAAAAGGTGGTGCGATCCTCTTGTCCGCGAGAACCCCATCTCCG
GTCCCGTCTACTCCACCTCGAGAGTGTTCTCGACGGGCTGCTTGGAGAGC
CTCTTCGTGATGTCAGGGCGAAGTTTGTCAGACTTGGCATTCCACAGCGA
GCTGAATGAGTCTCGCCCCTTTGTCGTTCACGGAGCCCTAGTCTCGCAGG
AATCTTTGTCGCGGTTCTATCAGTGGTACGGTACTGTGATTTGACCTACC
CCGCATCTTTCAATTTTCATAGGCTCAAAAAGATGCAGGAAGGATCCGCC
CAGATGTCGCCGCTTCGCGAGTACTCCTCCAGCTCCCGGACGTATGAATA
GTCATCAAGTATACCAGGTAGCAGAGTATGGATAAACCGGGTAAGGTTGC
CAATCCTGCACGGGGTCAACTGAACAGAGAAATGAATATTTCCCTGTCCC
CGTTGGCGTCTGAGAATTTGATCTCGCGAGATAGGTTAGATCATCCCGTC
CCACGTCAGCCTGATTATTCTCCATACTCAGGTTTGATCCTGTGCTTACT
TTCGGGATTCCTCCCGATTCTCGAGGCGACGTCCATTTATTTATTTAAAC
CGCCATCCGCTACCGGGCCAGGCCCGAGTTTATCGGATCACGCAATTGCG
TACCGATGGCGTTCATTGTCGAGAGTCCGCCGGCATATGGCCAGTAAATC
TCAAGGTAGTTCCGAACGGGTGCTGCCTTGGCAGGTCACCATGGACTAAT
TAGTGTGTGCCTCTTATTTCCCACAGCCATTAATATTTGTATGAAGCGGG
CATGATGAAAGTATCGGACGTACCAGGTAGTGATCAGTGTTAATACCTTT
ACTGTTCGCTCGACAGCATTCTTACCAACACAGCAACCTCGCTGCTCCTA
TCAGGTACAAAACCTGGGCGCGCGAAATAGCCGCTGCAAGAGTACACGAT
TCATAGCACGTGCCGTGGCTCGCGGAATCATGTCGGGACCCCCGCTGCCG
GAGTTCTGGACCGAGGAAATTGACGGGAAGGGTAGGCGGTTCTACAGCAA
CCACAGAACTAAATCGACGCATTGGGAGGTAGGACCCTCACGTTACGCTG
CTGTCGGCACGCGTACGCGCGGGGAAACGTTCGTTCTAATCCGAAAGGCT
TTGCGTCAAGCATTGTCGATGATTTTGCCCACGGGTTTTGCTTCAACAAA
ATCGCTGATAACACGTGCCTAGTCCCTACAGCTGCACGCGGTAGATTTGG
TGCTGTATCACAAGCAATGGCCGGTATTACTGTAGCAACATCAACCTACT
CCCACCACCTCTGCTTGCCAATGGGCGTCGAAGTATTCCGTTGAAAGGTT
ATTTACTGACTCAGCTAGCCCTCACGCCGTTGCTGGTTTCCACTTCTGCG
GACGACACGTCGTGCGCGCCCAAACGCCTCTTCCCGAAGCGCCCTGCGCC
TCCCGCTGATCTAGTGGTTCCCCCTCCTTACAGCGCGATCGCGCCGGTTC
AGGTGAGTAGGTTGGAACGAACGTAATCTTGTAGCTGTATCGGCGCTACC
CTCGGTACCATGGCCGTCTCAGCGACAACTTTATCAACCACTCGCACAAC
GTGGATCGCTTTACTGCGCACCTGCTTCGTAAGCTGCTTGCCGCCTTCCG
TCCATTCGTGGTACATATCGCGTCGTATGAGAGCTGTCATCCACGTTTCG
TTAAGAGTATAGTAGATTCGAGTCGTACAATGCGCTGTCGGGTTTCTAGC
ACGTCCGGAACATATGTATCGACCAAATGAAGGCACGCAAGTCGTTGCTT
CATCGCCCTCCGCACCTGCTGAAGTATGAAAAATAATCCTCGTGTGTTTC
TCCGCGACGGCGACGCTCTAGCGGCAGGTGCAGCACGCTCGCCAACCGCC
GCCCCCCAGGAAAAATGCCTGCTTGACGTGCACCCCCCGCGTCACGTTCT
GGGTCTCCGCTGCCTTGGTCCCTGTTGTGTGGGCCTTCGCGGTATGGGTG
AGAATGGTTGGAAACGGCTTGCCGGTAATGTGCAGCCAGCCTTTTATCTA
AAGGTCCATCTCTAAGTGGCGTCTATTGACAATTGCGTTGATTGTCTTAT
ACTGGCGAAACACTCGCTACTCATGGGCGTCGGCCCCGGCCTTCACGACC
GTTTTACATTTTGAGGGTGCAAAAAGCGTGAGTCGGCCGGAAAGGCGCCA
GTGCGTATGTGCGGTCGAGATCGGAAAAGAGTTGGCTCCGGCACTCGCCC
ATGTGTCACCACCAGTGTAGCCTATGCGAACATATCGCGTCTAGCAATGA
TATTACTGCTGTTGCCGCGCTCCGCTCTTTTGATGACAGGCGACCGCTGA
TGACAACTGGTTCGCCAGCGTGCCCCTTGCTGTGGTCGACGAAGATATCC
TGGGCCAATGTACCATTGAAGACGATTCGTACGCAGATGTCAACGAGTTC
TGCGAGCTCTGTAAGTGTTGTTTGGTCGGCTTTTACCCCCAGCTCGCCAG
CTCGTTTTGAGACAGTTCCACTCTGCTGAATCCCGGAGAGCATTCAACTC
CCGCTTGGATGATGTGCTTCCAGAACCCGTTGATACTTAAAAATCTCATC
AAAAGTAACCCGTTGATACTTAAAAATCCCATCAAAAGTCACGTCTGCTG
TACACGAACACTCACGCCGGCGCACCCTCGCGCTTTCTTCCAGACGTTTC
GTTCGTGGCGATGCAGCTGATCGCAACCTTAATGGTGTCGATAGCATGCG
TACTGCTTGGGGTAGCTCTCTGCCGACCCGCGGTGGGATGTTGCTGCTCG
ACGACAGCGCTCGGGTTTGGAAGCGGATTCGTGCTGGCTTTGTTCGCGTT
TTTCCAGCTCCTGGTGCTCGTCCTGGTCATCGCTATCGAGAACGAGGAAA
GCGTCGCAGGTAAGACTGTGACACCACACAGCCTATCATGCCTGGGCTAG
GGTGTTTCCCTGCATTCGGGCGTTTCGATTGAGACGGTAATGTCGCTGGG
GCAACAGATTGATATGGTAAAGCGTGCGGCAAATCACAGGTTCTAGGTGG
AATGGCTGCGGTCACACCTCGATCACCTCACTTTGTACCGCGGTGCTGCA
AATCTATGTAAGAGCGGCGTTTCTTCTCGCGTGCTGGTGGCACATCGGGG
TGAACCTGCCCTGATATCTTCTTGATCGACCGATGCCCTTGCCGATGCCG
ATGAACCGCCACAGTGTATTACTCCGACGACCTCCAAAACGACCACGACC
CGAACATAGGCATCACCTTCTGGGGGGGCGCGATCGGTTTCGTGATGGCC
ATGTTCGAAGGGGGCATTCTCCTCACCTTTGCCGGATCGGCAGGCGACGG
CCCCCTATACGCGATTGCCCATAGGCTGATGTCCTCCAAGCGCTAAAGCT
GTGGTGTAGCCAAAAATATTATGTAGCTTCCCGCGCCCAACGCAGGTTTG
GGGGGGGCGGGGGGGGGGCAGTAATAGCACCCTCATTGACGGCGGAAGCG
CCTGTGCCTGTGTCTGAGCCTACCCCTCTTTCTCCCCCTGAGGAAGGTAA
GAGCTGAGCCACAGCATGATCGTACATCACGTTAGATATTTCTTTTTCGC
TGTATCGAACCCAAAGCTTACGGAGTGTGGGGGGAAGCCCTAAGAACAAA
AATGTTGTTCCTCGGTCACAACACCAGGTACGTTTTGTGGCGCCATTGCC
TTCTCTTAAGAAAAAAACGTGAGCAATGGCACAAGCTGACAACCCTTGAT
TATTCAACGCACCCCGTGTTTTACTCCACGTAAGTAGGAGTCTCGCGCGA
TCGTTTCGTTTTTCACACAGTTGAGAATGCTTTGCGGTTAGACCTTCCTG
GGAATGGAAGCTTGTAGCTCGAGAACACAAATGGTGGCGGGCAGCTCGAA
AAGGGTATAGAAGGTTGCGAAGCGGTTTGACGCAAAGAGCAAGGCCGACC
AACGATGACACGTTGTGCCCTCGTTTCTCTTTGTGGAACCTACTCCTTGG
TCATGAATGTGGGTAGCCGACGGGAGTTGTAGTTGTCCTGGACAGCGAAA
GACTCCCAAGGGGCAAGGAGAAGTACGTGAGCTCTCGAACGAATGATCGT
AGTTATGCATAGGTCTTGGCCATGACGAGTCGGTAGCCATTTTCGGCCTG
GAGCGTACGCCCCAATCCTCTTCGAGTAGATGTTGACGTTTGAAATTCGA
GTCCTCAGTATCCACCATGTATAGAGTTGTATCAAACTAAGGTCACGCGT
AGCTGAGTCCTATGATAATTGCCGTGTGCATGGAATATTATCGCGGAAAT
ACATATATCAAGGGTATATATTTTGTAGCTCTATATCATATATTTGTAGT
AAAGAAGAGGAAGCGAGCGGGACAGGCGCAGTCTCTCTCGATGGAAGCAC
CAACAGTAAATAATAAGGATTTGTTTTAATGATATGTGATGGAATACATC
CCGAGCTTTATGGGACTTGTACGGGCGTGCTATTCGAGTTGGGGTTGGTG
TTGGAGCTGGAGATGTAGAGGTAGAGATAAGTTACATAACATTCATGATG
AGAGCCCAATATAAAGGGTTATTTCGTA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig65:543544..554571+

>mRNA_F-serratus_M_contig65.17475.1 ID=mRNA_F-serratus_M_contig65.17475.1|Name=mRNA_F-serratus_M_contig65.17475.1|organism=Fucus serratus male|type=CDS|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig65:543544..554571+ (Fucus serratus male)
ATGTCGGGACCCCCGCTGCCGGAGTTCTGGACCGAGGAAATTGACGGGAA
GGGTAGGCGGTTCTACAGCAACCACAGAACTAAATCGACGCATTGGGAGA
TGTCGGGACCCCCGCTGCCGGAGTTCTGGACCGAGGAAATTGACGGGAAG
GGTAGGCGGTTCTACAGCAACCACAGAACTAAATCGACGCATTGGGAGCG
CCCTGCGCCTCCCGCTGATCTAGTGGTTCCCCCTCCTTACAGCGCGATCG
CGCCGGTTCAGCGCCCTGCGCCTCCCGCTGATCTAGTGGTTCCCCCTCCT
TACAGCGCGATCGCGCCGGTTCAGCGGCAGGTGCAGCACGCTCGCCAACC
GCCGCCCCCCAGGAAAAATGCCTGCTTGACGTGCACCCCCCGCGTCACGT
TCTGGGTCTCCGCTGCCTTGGTCCCTGTTGTGTGGGCCTTCGCGGTATGG
CGGCAGGTGCAGCACGCTCGCCAACCGCCGCCCCCCAGGAAAAATGCCTG
CTTGACGTGCACCCCCCGCGTCACGTTCTGGGTCTCCGCTGCCTTGGTCC
CTGTTGTGTGGGCCTTCGCGGTATGGGCGACCGCTGATGACAACTGGTTC
GCCAGCGTGCCCCTTGCTGTGGTCGACGAAGATATCCTGGGCCAATGTAC
CATTGAAGACGATTCGTACGCAGATGTCAACGAGTTCTGCGAGCTCTGCG
ACCGCTGATGACAACTGGTTCGCCAGCGTGCCCCTTGCTGTGGTCGACGA
AGATATCCTGGGCCAATGTACCATTGAAGACGATTCGTACGCAGATGTCA
ACGAGTTCTGCGAGCTCTACGTTTCGTTCGTGGCGATGCAGCTGATCGCA
ACCTTAATGGTGTCGATAGCATGCGTACTGCTTGGGGTAGCTCTCTGCCG
ACCCGCGGTGGGATGTTGCTGCTCGACGACAGCGCTCGGGTTTGGAAGCG
GATTCGTGCTGGCTTTGTTCGCGTTTTTCCAGCTCCTGGTGCTCGTCCTG
GTCATCGCTATCGAGAACGAGGAAAGCGTCGCAGACGTTTCGTTCGTGGC
GATGCAGCTGATCGCAACCTTAATGGTGTCGATAGCATGCGTACTGCTTG
GGGTAGCTCTCTGCCGACCCGCGGTGGGATGTTGCTGCTCGACGACAGCG
CTCGGGTTTGGAAGCGGATTCGTGCTGGCTTTGTTCGCGTTTTTCCAGCT
CCTGGTGCTCGTCCTGGTCATCGCTATCGAGAACGAGGAAAGCGTCGCAG
TGTATTACTCCGACGACCTCCAAAACGACCACGACCCGAACATAGGCATC
ACCTTCTGGGGGGGCGCGATCGGTTTCGTGATGGCCATGTTCGAAGGGGG
CATTCTCCTCACCTTTGCCGGATCGGCAGGCGACGGCCCCCTATACGCGA
TTGCCCATAGGCTGATGTCCTCCAAGCGCTAATGTATTACTCCGACGACC
TCCAAAACGACCACGACCCGAACATAGGCATCACCTTCTGGGGGGGCGCG
ATCGGTTTCGTGATGGCCATGTTCGAAGGGGGCATTCTCCTCACCTTTGC
CGGATCGGCAGGCGACGGCCCCCTATACGCGATTGCCCATAGGCTGATGT
CCTCCAAGCGCTAA
back to top