prot_F-serratus_M_contig65.17471.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig65.17471.1
Unique Nameprot_F-serratus_M_contig65.17471.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length199
Homology
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BLAST of mRNA_F-serratus_M_contig65.17471.1 vs. uniprot
Match: D8LMJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ1_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.810e-45
Identity = 161/194 (82.99%), Postives = 174/194 (89.69%), Query Frame = 0 
Query:    1 MKCRVFNVNNNRLAGLPHCLKDMPRLTVLSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDMVYPPSEIVREGCECVRRWCLRRLHDRVQARQHTIVVAVQDILRQIATRGLGSPTFFEPDVHIGDNKEDLH-YALIYERFWDTMLPALER 193
            MKCR  NV+NN+LAGLPHCLKDMPRLT +SAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NDMVYPP E++ +GC+ VR WC RR+HDRV ARQHTIV+AVQDIL+QI  RGLG P FFEPDV +G N+   H YAL+YERFWDTMLPALER
Sbjct:  280 MKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNDMVYPPKEVILQGCDRVRAWCYRRMHDRVIARQHTIVMAVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALER 473
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BLAST of mRNA_F-serratus_M_contig65.17471.1 vs. uniprot
Match: A0A6H5KAI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI0_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.380e-35
Identity = 66/92 (71.74%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:  103 NDMVYPPSEIVREGCECVRRWCLRRLHDRVQARQHTIVVAVQDILRQIATRGLGSPTFFEPDVHIGDNKEDLH-YALIYERFWDTMLPALER 193
            NDMVYPP EI+ +GC+ VR WC RR+HDRV ARQHTIV+ VQDIL+QI  RGLG P FFEPDV +G N+   H YAL+YERFWDTMLPALER
Sbjct:   81 NDMVYPPKEIILQGCDRVRAWCHRRMHDRVSARQHTIVMTVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALER 172
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BLAST of mRNA_F-serratus_M_contig65.17471.1 vs. uniprot
Match: A0A482SUE5_9ARCH (Leucine-rich repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUE5_9ARCH)

HSP 1 Score: 73.2 bits (178), Expect = 9.120e-12
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:  108 PPSEIVREGCECVRRWCLRRLHDRVQARQHTIVVAVQDILRQIATRGLGSPTFFEPDVHIGDNKEDLHYALIYERFWDTMLPALERV 194
            PPSEI+ EG + V ++C        Q R   I++  Q++L+QIA RG+  P FFEP+  IG N EDL   L    FW+ ++P + ++
Sbjct:  282 PPSEILIEGAKRVVKFCFDTYMSDKQGRMRHIILTSQNVLQQIADRGVYDPAFFEPEARIGSNAEDLWVGLQLTHFWNDLIPRMNQI 368
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMJ1_ECTSI1.810e-4582.99Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KAI0_9PHAE2.380e-3571.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SUE5_9ARCH9.120e-1239.08Leucine-rich repeat domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 48..104
e-value: 1.5E-7
score: 31.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..117
e-value: 1.6E-24
score: 88.2
NoneNo IPR availablePANTHERPTHR45752FAMILY NOT NAMEDcoord: 8..80
NoneNo IPR availablePANTHERPTHR45752:SF46LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 4coord: 8..80
coord: 39..161
NoneNo IPR availablePANTHERPTHR45752FAMILY NOT NAMEDcoord: 39..161
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 4..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig65contigF-serratus_M_contig65:413182..415518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig65.17471.1mRNA_F-serratus_M_contig65.17471.1Fucus serratus malemRNAF-serratus_M_contig65 413143..416383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig65.17471.1 ID=prot_F-serratus_M_contig65.17471.1|Name=mRNA_F-serratus_M_contig65.17471.1|organism=Fucus serratus male|type=polypeptide|length=199bp
MKCRVFNVNNNRLAGLPHCLKDMPRLTVLSAVNNVLRSLPSDIGDSKSIT
ALHLAANRLNQLPDNIYRLKTLRVLWLDHNFITGLPMKFHKLTNLDRLFM
EQNDMVYPPSEIVREGCECVRRWCLRRLHDRVQARQHTIVVAVQDILRQI
ATRGLGSPTFFEPDVHIGDNKEDLHYALIYERFWDTMLPALERVRAQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf