prot_F-serratus_M_contig6467.17408.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6467.17408.1
Unique Nameprot_F-serratus_M_contig6467.17408.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length537
Homology
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BLAST of mRNA_F-serratus_M_contig6467.17408.1 vs. uniprot
Match: D7G3J8_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J8_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 2.910e-103
Identity = 194/318 (61.01%), Postives = 232/318 (72.96%), Query Frame = 0 
Query:  165 AQGRVREALQLLEESVATLKQRHPPQAVPTAQALHDLASFVRPIEPARACCMYFEALKLLENAR-VENIIAAPTLAKLGSLLGASIVAATAIPPXXXXXXXXXXXXXARSAGLAEAVCAAGESFRTKVYDANSKSAAESAASMKVAAGPLWDLKEAQGMIKRAIVIQGGDLGLRHPAVASSLQELAELYRKQGRLSEAEPLFRKAIGIREVSRGP--LDVDAVVALHGMAHCVLARPGADWLGKFEEAFSLVDQAYRIASTLPESDLDGDFSSCRLLLEALRMIRTRQRQGRAALQPASAAIMEAVWNGRWDPEANNG 479
            AQGR +EA QLLE+S+  LK+R PPQAV  AQA+HDLA  VRP +PARAC +Y +ALK LE+AR V + + APTLAKLG+LLG S+VAA  IP               RSAGLAEAVCA            ++    E  +++  AAG  WD K+A+ MIKRA++IQG  LGLRHPAVASS++ +AELYR+QGRL+EAEPLFR+AIGI E+SRG   +D DA+ ALHG AHCVLA  GADWLG+FEEAF+LVDQAYRIAS+ P +D     +S RLLLEALRMIR+RQRQGR   QPASAAIME VW GRWDP  N+G
Sbjct:  403 AQGRAKEAEQLLEDSLRVLKRRKPPQAVCVAQAMHDLAGIVRPADPARACTLYRQALKTLEDARGVNHFLTAPTLAKLGALLGESLVAAADIPITPAQPAGPGCAGIQRSAGLAEAVCA------------SAGCGVEDGSAVAAAAGVDWDPKKAEEMIKRAVLIQGRHLGLRHPAVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWELSRGGGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHPGND-----ASSRLLLEALRMIRSRQRQGRGDPQPASAAIMEGVWTGRWDPAKNDG 703
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BLAST of mRNA_F-serratus_M_contig6467.17408.1 vs. uniprot
Match: A0A6H5JNZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ5_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 5.300e-78
Identity = 154/263 (58.56%), Postives = 186/263 (70.72%), Query Frame = 0 
Query:  165 AQGRVREALQLLEESVATLKQRHPPQAVPTAQALHDLASFVRPIEPARACCMYFEALKLLENA-RVENIIAAPTLAKLGSLLGASIVAATAIPPXXXXXXXXXXXXXARSAGLAEAVCAAGESFRTKVYDANSKSAAESAASMKVAAGPLWDLKEAQGMIKRAIVIQGGDLGLRHPAVASSLQELAELYRKQGRLSEAEPLFRKAIGIREVS--RGPLDVDAVVALHGMAHCVLARPGADWLGKFEEAFSLVDQAYRIASTLP 424
            AQGR +EA QLLE+S+  LK+R PPQAV  AQA+HDLA  VRP +PARAC +Y +ALK LE A  V++ +  PTLAKLG+LLG S+VAA  IP               RSAGLAEAVCA            ++    E ++++  AAG  WD K+A+ MIKRA  IQG  LGLRHP VASS++ +AELYR+QGRL+EAEPLFR+AIGI EVS   G +D DA+ ALHG AHCVLA  GADWLG+FEEAF+LVDQAYRIAS+ P
Sbjct:  394 AQGRAKEAEQLLEDSLRVLKRRKPPQAVCVAQAMHDLAGIVRPADPARACTLYRQALKTLEGACGVDHFLTTPTLAKLGALLGESLVAAADIPITPAQPAGPGCAGIQRSAGLAEAVCA------------SAGCGVEDSSAVAAAAGVDWDPKKAEEMIKRAAFIQGRFLGLRHPTVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWEVSGGEGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHP 644
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BLAST of mRNA_F-serratus_M_contig6467.17408.1 vs. uniprot
Match: A0A6H5JPJ0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ0_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.590e-9
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:  436 RLLLEALRMIRTRQRQGRAALQPASAAIMEAVWNGRWDPEANNGA 480
            RLLLEALRMI +RQRQGR   QPASAAIME VW GRWDP  N G+
Sbjct:   12 RLLLEALRMIGSRQRQGRGDPQPASAAIMEGVWTGRWDPAKNGGS 56
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BLAST of mRNA_F-serratus_M_contig6467.17408.1 vs. uniprot
Match: I4IUJ3_MICAE (Kinesin light chain n=1 Tax=Microcystis aeruginosa PCC 9701 TaxID=721123 RepID=I4IUJ3_MICAE)

HSP 1 Score: 53.9 bits (128), Expect = 2.180e-5
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:  334 LGLRHPAVASSLQELAELYRKQGRLSEAEPLFRKAIGIRE 373
            LG  HP VA+SL  LAELYR QGR +EAEPL+R+A+ +R+
Sbjct:    6 LGDNHPLVATSLNNLAELYRSQGRYTEAEPLYREALDLRK 45
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BLAST of mRNA_F-serratus_M_contig6467.17408.1 vs. uniprot
Match: UPI00155B2976 (uncharacterized protein LOC117930483 n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155B2976)

HSP 1 Score: 55.5 bits (132), Expect = 6.860e-5
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0 
Query:  316 LKEAQGMIKRAIVIQGGDLGLRHPAVASSLQELAELYRKQGRLSEAEPLFRKAIGIREVSRGPLDVDAVVALHGMAHCVLARPGADWLGKFEE 408
            L+EA+     A+       G++ P VASS   LAELYR +    +AEPL+ +AI I + S GP D+   + +     CV+ R G D   K +E
Sbjct:  138 LEEAENFFLSALQEAKEGFGVKDPHVASSCNNLAELYRVKKLFDKAEPLYLEAINILQESFGPEDIRNALEMLLSKGCVIGRVGIDMEAKEKE 230
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6467.17408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3J8_ECTSI2.910e-10361.01TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JNZ5_9PHAE5.300e-7858.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPJ0_9PHAE1.590e-975.56RING-type domain-containing protein n=1 Tax=Ectoca... [more]
I4IUJ3_MICAE2.180e-562.50Kinesin light chain n=1 Tax=Microcystis aeruginosa... [more]
UPI00155B29766.860e-536.56uncharacterized protein LOC117930483 n=1 Tax=Vitis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availablePFAMPF13424TPR_12coord: 316..373
e-value: 6.7E-8
score: 32.7
NoneNo IPR availablePFAMPF13374TPR_10coord: 153..185
e-value: 4.5E-6
score: 26.4
NoneNo IPR availablePANTHERPTHR45641FAMILY NOT NAMEDcoord: 153..422
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 342..375
e-value: 0.054
score: 22.6
coord: 153..186
e-value: 61.0
score: 8.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 342..375
score: 8.732
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 153..186
score: 5.428
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 135..248
e-value: 6.6E-7
score: 30.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 283..464
e-value: 1.0E-18
score: 69.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 315..424
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 342..375
score: 9.058
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 153..186
score: 6.835

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6467contigF-serratus_M_contig6467:8605..11856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6467.17408.1mRNA_F-serratus_M_contig6467.17408.1Fucus serratus malemRNAF-serratus_M_contig6467 5302..27805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6467.17408.1 ID=prot_F-serratus_M_contig6467.17408.1|Name=mRNA_F-serratus_M_contig6467.17408.1|organism=Fucus serratus male|type=polypeptide|length=537bp
MSCSDNDADRYQSLSAPRSENDDLEINRTERADSAKDEIKPERSTGQERF
PRYHRGAPGLGFPVPEPPPLSLPPSLSSVGLGNDAQSKAEVLALELSGES
STETGFVVGPNRVKSLRAKNILVTPRLRDEMVKSDRELEDAELEAKDSEH
MAAVAKHHLAVVLHAQGRVREALQLLEESVATLKQRHPPQAVPTAQALHD
LASFVRPIEPARACCMYFEALKLLENARVENIIAAPTLAKLGSLLGASIV
AATAIPPVPAAPAGPGRTGRARSAGLAEAVCAAGESFRTKVYDANSKSAA
ESAASMKVAAGPLWDLKEAQGMIKRAIVIQGGDLGLRHPAVASSLQELAE
LYRKQGRLSEAEPLFRKAIGIREVSRGPLDVDAVVALHGMAHCVLARPGA
DWLGKFEEAFSLVDQAYRIASTLPESDLDGDFSSCRLLLEALRMIRTRQR
QGRAALQPASAAIMEAVWNGRWDPEANNGAGSPRRLGGSAGIEGVKTPLR
RTTTQGTAAGETTLVVPCVWRKSRPKAARLVGPATR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom