prot_F-serratus_M_contig6456.17397.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6456.17397.1
Unique Name	prot_F-serratus_M_contig6456.17397.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	149

Homology

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BLAST of mRNA_F-serratus_M_contig6456.17397.1 vs. uniprot
Match: D8LHI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI4_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 4.980e-47
Identity = 83/142 (58.45%), Postives = 99/142 (69.72%), Query Frame = 0

Query:    2 LGFKRGAILVSLCWVAILVHIIDRKWWQAAVWALFSSILTSVGIIHVQVTGFDFFTKTAGILCSPVTEDDGIVASVTCWEHGNWLQYFIAYLMMGVVFTGIEALRRAAIGDLDASIECSEADDDFKGWLNKEENMVENIIEE 143
            LG KRGAILVSLCWVA+LVHIIDRKWWQA+VWA+ S+  T+VGIIHV V GFD FT T G LC+PVT+D  +V + +CW+H +   Y  AYLMM VVF  IE +RRA +G+LD  I   EAD  FK W   E       +EE
Sbjct:  438 LGLKRGAILVSLCWVAMLVHIIDRKWWQASVWAVISACFTAVGIIHVPVAGFDDFTSTVGDLCTPVTDDLEVVTTASCWDHADQWHYMTAYLMMAVVFVAIEGVRRAGVGNLDEPILTEEADA-FKDWYGDEPPTTGPKVEE 578

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BLAST of mRNA_F-serratus_M_contig6456.17397.1 vs. uniprot
Match: A0A1Z5K0X1_FISSO (Putative MFS transporter, AGZA family, xanthine/uracil permease n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0X1_FISSO)

HSP 1 Score: 91.3 bits (225), Expect = 1.460e-18
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 0

Query:    2 LGFKRGAILVSLCWVAILVHIIDRKWWQAAVWALFSSILTSVGIIHVQVTGFDFFTKTAGILCSPVTEDDGIVASVTCWEHGNWLQYFIAYLMMGVVFTGIEALRRAAIGD-LDASIECSEADDDFKGWLNKEENMVENI 140
            L +KRGA+LVS  WVAILV +IDR+W +A  W+L ++  +  GIIH+   G +  ++     C          A  +CWEHG    YF+AYLM   +F  IE  RR+ + + L   +E     D+FK W    E     +
Sbjct:  542 LAWKRGALLVSFVWVAILVSVIDRQWNKATFWSLLAAGFSLFGIIHMPEAGLEKLSEPFWEQCP---------AGGSCWEHGEQWMYFVAYLMFAGIFVLIELARRSGLDEQLLPGLE-DPTSDEFKDWFRDAEKTTHTV 671

[Close]

BLAST of mRNA_F-serratus_M_contig6456.17397.1 vs. uniprot
Match: A0A7S2UIB7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIB7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.310e-17
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 0

Query:    1 MLGFKRGAILVSLCWVAILVHIIDRKWWQAAVWALFSSILTSVGIIHVQVTGFDFFTKTAGILCSPVTEDDGIVASVTCWEHGNWLQYFIAYLMMGVVFTGIEALRRAAIGDLDASIECSEADDDFKGWLNKEENMVE 138
            +L +KRGA+LVS  WVA+LV +IDRKW +AAVW+   ++    GIIHV   GF  F        +PV E   + +   CW+      +F+AYLM+   F  IE  R   + D        E    F  W    + ++E
Sbjct:   59 LLAWKRGALLVSFVWVAMLVSVIDRKWKKAAVWSTMGALFALFGIIHVPEAGFANFA-------TPVWEQC-VSSPGNCWDFAEQYMFFVAYLMLTGTFALIEVARSMGLDDTLLPAIVDEEGVSFGDWYANADKIIE 188

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6456.17397.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6456.17397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LHI4_ECTSI	4.980e-47	58.45	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A1Z5K0X1_FISSO	1.460e-18	36.43	Putative MFS transporter, AGZA family, xanthine/ur...	[more]
A0A7S2UIB7_9STRA	1.310e-17	35.51	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..50
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 106..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 85..105
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 24..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 51..84
None	No IPR available	TMHMM	TMhelix		coord: 30..52
None	No IPR available	TMHMM	TMhelix		coord: 4..23
None	No IPR available	TMHMM	TMhelix		coord: 85..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6456	contig	F-serratus_M_contig6456:6394..8047 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6456.17397.1	mRNA_F-serratus_M_contig6456.17397.1	Fucus serratus male	mRNA	F-serratus_M_contig6456 5045..8788 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6456.17397.1 ID=prot_F-serratus_M_contig6456.17397.1|Name=mRNA_F-serratus_M_contig6456.17397.1|organism=Fucus serratus male|type=polypeptide|length=149bp
MLGFKRGAILVSLCWVAILVHIIDRKWWQAAVWALFSSILTSVGIIHVQV
TGFDFFTKTAGILCSPVTEDDGIVASVTCWEHGNWLQYFIAYLMMGVVFT
GIEALRRAAIGDLDASIECSEADDDFKGWLNKEENMVENIIEEKPKHE*