prot_F-serratus_M_contig643.17355.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig643.17355.1
Unique Nameprot_F-serratus_M_contig643.17355.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length108
Homology
BLAST of mRNA_F-serratus_M_contig643.17355.1 vs. uniprot
Match: D7G7N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N6_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 3.700e-20
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    1 MSNSQANVGTWLVDLIMKPGTSVQLVPAINFTLCLLGTMLLYLVANGESSVHLYVMGGLAVGLMVSINW 69
            +S     +G WLVDL MKPG+SVQLVP IN  LC+L  +L+Y+ A+GE S+H+YVMG L++GLM S+NW
Sbjct:   17 ISGGGEGIGQWLVDLAMKPGSSVQLVPFINGVLCILVGLLVYVAASGEGSIHVYVMGFLSIGLMGSVNW 85          
BLAST of mRNA_F-serratus_M_contig643.17355.1 vs. uniprot
Match: A0A7S1UA77_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA77_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.300e-14
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    7 NVGTWLVDLIMKPGTSVQLVPAINFTLCL-LGTM--LLYLVANGESSVHLYVMGGLAVGLMVSINWFISEFNKVKRQQALEGDGG 88
            + G W ++LIM PG+SVQL+P IN  L + +G M    Y   NG   +H  VM  LA+GL V INWF+ E+ K K +Q   GD G
Sbjct:   30 SAGEWAINLIMAPGSSVQLLPVINLALAIVIGVMGYTAYSTDNGAVQLHCSVMSFLALGLCVVINWFVGEYQKAKAEQEAAGDSG 114          
BLAST of mRNA_F-serratus_M_contig643.17355.1 vs. uniprot
Match: B3RPS9_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RPS9_TRIAD)

HSP 1 Score: 55.8 bits (133), Expect = 7.400e-8
Identity = 28/73 (38.36%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   12 LVDLIMKPGTSVQLVPAINFTLCLLGTMLLYLVANGESSVHLYVMGGLAVGLMVSINWFISEFNKVKRQQALE 84
            +VD I +PG + Q+V  IN    +L  + + L    E ++HL ++G L   L++SINWF++E  KVK + A E
Sbjct:   23 IVDNIFQPGVNSQVVIFINVVFVILLILFITLAVLWELNIHLIILGSLTFILIISINWFLAEIQKVKMESAQE 95          
BLAST of mRNA_F-serratus_M_contig643.17355.1 vs. uniprot
Match: A0A485LC41_9STRA (Aste57867_18622 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC41_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.130e-5
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 0
Query:   17 MKPGTSVQLVPAINFTLCLLGTMLLYLVAN----GESSVHLYVMGGLAVGLMVSINWFISEFNKVKRQQAL----EGDGGTSTT 92
            ++PGT  + V A+N    +LGT+LL + A      E S+H+++   LAVGL +SINWFI E   ++ +  L    EGDG T  T
Sbjct:   12 LEPGTGDKFVIALN---AVLGTLLLVIGATIWSGVEDSIHMFIFLFLAVGLTLSINWFIVEARALQAEGKLNFGSEGDGATKKT 92          
BLAST of mRNA_F-serratus_M_contig643.17355.1 vs. uniprot
Match: A0A6G0WW32_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW32_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 7.520e-5
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   17 MKPGTSVQLVPAINFTLCLLGTMLLYLVA---NG-ESSVHLYVMGGLAVGLMVSINWFISEFNKVKRQQALEGDGGTSTTSA 94
            ++PGT  + V  +N  L   GT++L + A   +G E S+H++V   LAVGL +SINWFI E   +  +  L  DGG+S   A
Sbjct:   22 LEPGTGDKFVLVLNGVL---GTLILVISATIWSGLEDSIHMFVFLFLAVGLTLSINWFIMEARALHAEGKLNLDGGSSKNDA 100          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G7N6_ECTSI3.700e-2057.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UA77_9STRA2.300e-1445.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B3RPS9_TRIAD7.400e-838.36Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
A0A485LC41_9STRA1.130e-540.48Aste57867_18622 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WW32_9STRA7.520e-540.24Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013945V-type ATPase assembly factor Pkr1PFAMPF08636Pkr1coord: 11..78
e-value: 9.9E-15
score: 54.4
IPR013945V-type ATPase assembly factor Pkr1PANTHERPTHR28251FAMILY NOT NAMEDcoord: 5..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..107
NoneNo IPR availableTMHMMTMhelixcoord: 53..72
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig643contigF-serratus_M_contig643:263458..269315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig643.17355.1mRNA_F-serratus_M_contig643.17355.1Fucus serratus malemRNAF-serratus_M_contig643 263413..270351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig643.17355.1 ID=prot_F-serratus_M_contig643.17355.1|Name=mRNA_F-serratus_M_contig643.17355.1|organism=Fucus serratus male|type=polypeptide|length=108bp
MSNSQANVGTWLVDLIMKPGTSVQLVPAINFTLCLLGTMLLYLVANGESS
VHLYVMGGLAVGLMVSINWFISEFNKVKRQQALEGDGGTSTTSAAASGEE
STRPKTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013945Pkr1