prot_F-serratus_M_contig643.17353.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig643.17353.1
Unique Name	prot_F-serratus_M_contig643.17353.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	366

Homology

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BLAST of mRNA_F-serratus_M_contig643.17353.1 vs. uniprot
Match: D7G7N3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7N3_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 6.920e-47
Identity = 149/326 (45.71%), Postives = 179/326 (54.91%), Query Frame = 0

Query:   39 MCDVYERLSRVCVQVHIDESQGIIAFAPVVEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXVLQ---------------QAPRYGCDPRTAWSPWRYTVLPVEGRTAIDVVPPATVSFVESLITVRSDLDPFLHAEALTYTPRQGVVPPGGDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFLTFGLSSWSSAVVGCTFLAVGLLLLLQPTLALRXXXXXXXXXXXXXXXXXXXDSDGGVVGL---------GGRGEKRPRGKQWSYGQVDSQWDEADSESSEGSCVAQREVE---WARGVEWQRQPSGRFAMSPTPSD 337
            MC+VYERLS VCVQVH+D++ G I+FAPV E GS      XXXXXXXXXXXXXXXXXXXX                  +  RYGCDPR AWSPW Y V+ VEGRT +DVVPP T++F ++L+T RSDLDPFLH EALTY P  G +  GG  XXXXXX                             +FLTFGLSSW+SAVVG  FL VGLLLL+QP LAL+                     +GG  G           GRG K  RG QW YGQ+++ WD+  SE  +G      + +   W    +WQ + S      P+PS+
Sbjct:    1 MCEVYERLSTVCVQVHVDDNNGEISFAPVAEIGSGDSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETARYGCDPRNAWSPWGYAVVTVEGRTVLDVVPP-TITFSKTLVTTRSDLDPFLHVEALTYDPSSGGI--GGGXXXXXXXAEGASGEGISPEGSVGGGGGG--------QFLTFGLSSWNSAVVGSAFLVVGLLLLVQPVLALKAWWREGGVG----------SDEGGPTGXXXXXXXXXRSGRGGKL-RG-QWRYGQLETDWDDG-SEFVDGGVYEGEDDDDDGWGSEGDWQGETSSGVGRPPSPSE 302

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BLAST of mRNA_F-serratus_M_contig643.17353.1 vs. uniprot
Match: A0A835YNJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.410e-17
Identity = 59/163 (36.20%), Postives = 79/163 (48.47%), Query Frame = 0

Query:    1 METGWTPLTRIREEHAPMPAPETKCMQVFGGVHNYKTKMCDVYERLSRVCVQVHIDESQGIIAFAPVVEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXVLQQAPRYGCDPRTAWSPWRYTVLPVEGRTAIDV-VPPATVSFVESLITVRSDLDPFLHAEALTY 162
            + T + PLT  R   AP PAPETKCM    GV ++ ++ C  Y+ L+ +CVQV +    G  + AP+V                                   P YGC    AWSP  Y  LP+EG +  DV VPP  V+     ITVRS+LDP+LHA+ +T+
Sbjct:  104 LATVYFPLTTTRRARAPQPAPETKCMVQQHGVLDHASQECVSYQALTSLCVQVRLSPG-GAASLAPMVRARKSSG---------------------------VPSYGCSAAAAWSPVAYAPLPLEGHSTDDVAVPP--VNLTALTITVRSELDPYLHAQVITH 236

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BLAST of mRNA_F-serratus_M_contig643.17353.1 vs. uniprot
Match: A0A6H5JGC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC6_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.690e-6
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0

Query:    1 METGWTPLTRIREEHAPMPAPETKCMQV 28
            M T WTPLTRIREEHAPMPAPETKCMQV
Sbjct:  435 MVTEWTPLTRIREEHAPMPAPETKCMQV 462

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig643.17353.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig643.17353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G7N3_ECTSI	6.920e-47	45.71	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YNJ9_9STRA	4.410e-17	36.20	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JGC6_9PHAE	6.690e-6	92.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 239..366
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..219
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 220..238
None	No IPR available	TMHMM	TMhelix		coord: 216..238

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig643	contig	F-serratus_M_contig643:249012..255291 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig643.17353.1	mRNA_F-serratus_M_contig643.17353.1	Fucus serratus male	mRNA	F-serratus_M_contig643 249012..255291 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig643.17353.1 ID=prot_F-serratus_M_contig643.17353.1|Name=mRNA_F-serratus_M_contig643.17353.1|organism=Fucus serratus male|type=polypeptide|length=366bp
METGWTPLTRIREEHAPMPAPETKCMQVFGGVHNYKTKMCDVYERLSRVC
VQVHIDESQGIIAFAPVVEDGSSGGGEDDGVTDGGGGGGDTDEGEEEEVL
QQAPRYGCDPRTAWSPWRYTVLPVEGRTAIDVVPPATVSFVESLITVRSD
LDPFLHAEALTYTPRQGVVPPGGDIVEDGGSGGGGTGGGKGVDPGAGGGS
ASEGGGGGGGEFLTFGLSSWSSAVVGCTFLAVGLLLLLQPTLALRRWWRR
TAAADGGVMAGGGGDSDGGVVGLGGRGEKRPRGKQWSYGQVDSQWDEADS
ESSEGSCVAQREVEWARGVEWQRQPSGRFAMSPTPSDRKKSRDQPPGRGG
LSAEFLRRRAGDVFEG