prot_F-serratus_M_contig643.17348.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig643.17348.1
Unique Nameprot_F-serratus_M_contig643.17348.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length305
Homology
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A6H5L4C1_9PHAE (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C1_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 8.040e-19
Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = 0
Query:  202 RRPSAEDALGTVSRRARSHSRVVEMGTDRAASLPPPSEPAGSSQGSPAT-SCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE 304
            RR  AED L T  R++ +    +    + AA    PS     +   PA    + ARA+AMVPMRPEEY AQ++ +R+VFDEDTGRWRLV+GTGEIIERIVSR+E
Sbjct:   73 RRNGAEDGLNTDYRQSTATGGFLPSSRNNAAQAQDPSNATTITAERPADMETKAARARAMVPMRPEEYAAQKRTVRQVFDEDTGRWRLVKGTGEIIERIVSRQE 176          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A1Z5KSI4_FISSO (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSI4_FISSO)

HSP 1 Score: 70.5 bits (171), Expect = 5.920e-11
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  252 CREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSR 302
            C++ +A+ M PM  EEY AQQ  IREV+DE TGR+RLVRGTGEIIE +VSR
Sbjct:  104 CKQEQARRMAPMSREEYQAQQSTIREVYDEQTGRYRLVRGTGEIIESLVSR 154          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S4J1R6_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1R6_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.600e-9
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 0
Query:  235 PPPSEPAGSSQGSPATSCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE 304
            PPP++P+ + + +     + A +++MVPM  EEY AQ+  IREV+D DTGR RLVRG GEIIERIVSR +
Sbjct:  247 PPPADPSTTEKATTENE-KAAASRSMVPMSREEYEAQRSVIREVYDPDTGRMRLVRGDGEIIERIVSRED 315          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S3Y5I9_HETAK (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5I9_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 3.520e-9
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
Query:  251 SCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE 304
            S ++ R  AMVPMR EEY AQQ  +RE+ D +TGR RLV+G+GEIIERIVS+ E
Sbjct:   98 SVKKQRRLAMVPMRREEYEAQQSVVREILDLETGRMRLVKGSGEIIERIVSKEE 151          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S2XU08_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU08_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.610e-8
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0
Query:  250 TSCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSR 302
            T  ++ R  AMVPM  E+Y AQQ  +REV+D ++GR+RLVRG+GEIIERIVSR
Sbjct:  235 TKSKKERVAAMVPMTREQYEAQQAVVREVYDAESGRFRLVRGSGEIIERIVSR 287          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A7S3LBW5_9STRA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBW5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.600e-8
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  261 VPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSRRE 304
             PM  EEY A +  +REV+DE +GR+RLVRGTGEIIERIVSR++
Sbjct:   38 APMTREEYEALRNTVREVYDEQSGRYRLVRGTGEIIERIVSRQD 81          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A2G8KF95_STIJA (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KF95_STIJA)

HSP 1 Score: 59.7 bits (143), Expect = 4.690e-7
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:  253 REARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSR 302
            RE++A+ + PM  EEY  +Q   R VFD+DTGR RLV+G+GEIIE IVSR
Sbjct:  118 RESQARILKPMTKEEYEKEQSVTRRVFDQDTGRTRLVKGSGEIIEEIVSR 167          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A1B6GJQ9_9HEMI (ADP-ribosylation factor-like protein 6-interacting protein 4 n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6GJQ9_9HEMI)

HSP 1 Score: 59.3 bits (142), Expect = 5.640e-7
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  256 RAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSR 302
            +A++M PM  EE+  QQ  IR V+DE+TGR RL+RG GEIIE IVSR
Sbjct:  112 KAQSMAPMSKEEWEKQQNTIRRVYDEETGRTRLIRGEGEIIEEIVSR 158          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A2P8YG36_BLAGE (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8YG36_BLAGE)

HSP 1 Score: 59.7 bits (143), Expect = 9.240e-7
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  256 RAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSR 302
            RAKAM PM  EE+  +Q  IR+VFDE+TGR RL++G GE++E IVSR
Sbjct:  167 RAKAMAPMTKEEWEKKQSVIRKVFDEETGRHRLIKGEGEVLEEIVSR 213          
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Match: A0A067QJQ7_ZOONE (ADP-ribosylation factor-like protein 6-interacting protein 4 n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QJQ7_ZOONE)

HSP 1 Score: 58.9 bits (141), Expect = 9.650e-7
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  256 RAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIVSR 302
            RAKAM PM  EE+  +Q  IR+V+DE+TGR RL++G GEI+E IVSR
Sbjct:  125 RAKAMAPMTKEEWEKRQSVIRKVYDEETGRHRLIKGDGEILEEIVSR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4C1_9PHAE8.040e-1952.88ADP-ribosylation factor-like protein 6-interacting... [more]
A0A1Z5KSI4_FISSO5.920e-1166.67ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S4J1R6_9STRA2.600e-954.29ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S3Y5I9_HETAK3.520e-962.96ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S2XU08_9STRA2.610e-862.26ADP-ribosylation factor-like protein 6-interacting... [more]
A0A7S3LBW5_9STRA4.600e-865.91ADP-ribosylation factor-like protein 6-interacting... [more]
A0A2G8KF95_STIJA4.690e-760.00ADP-ribosylation factor-like protein 6-interacting... [more]
A0A1B6GJQ9_9HEMI5.640e-761.70ADP-ribosylation factor-like protein 6-interacting... [more]
A0A2P8YG36_BLAGE9.240e-761.70ADP-ribosylation factor-like protein 6-interacting... [more]
A0A067QJQ7_ZOONE9.650e-761.70ADP-ribosylation factor-like protein 6-interacting... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019532Nuclear RNA-splicing-associated protein, SR-25PFAMPF10500SR-25coord: 150..303
e-value: 2.7E-15
score: 56.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig643contigF-serratus_M_contig643:186193..188113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig643.17348.1mRNA_F-serratus_M_contig643.17348.1Fucus serratus malemRNAF-serratus_M_contig643 185588..188807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig643.17348.1 ID=prot_F-serratus_M_contig643.17348.1|Name=mRNA_F-serratus_M_contig643.17348.1|organism=Fucus serratus male|type=polypeptide|length=305bp
MGRRRERDGEGHHSHRSRSKDARKSFDKEVRNDRRPTISPRPPRGITLSA
SRRSPTSGSSSTGTSESLLGEGDPPRSRKRKKRHDGGRAAEDDATSCSGG
RGGSVVTEKRTTSKARKKARRMTDVPDKKREKKRQKKRDREDRKIRGVGE
EKVKKHSKRRREEKKILLLSSSSRAQTASGDSSTGNNGTDGSARANDRTL
ARRPSAEDALGTVSRRARSHSRVVEMGTDRAASLPPPSEPAGSSQGSPAT
SCREARAKAMVPMRPEEYTAQQKNIREVFDEDTGRWRLVRGTGEIIERIV
SRRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019532Nucl_RNA-splicing_assoc_SR-25