prot_F-serratus_M_contig643.17345.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig643.17345.1
Unique Nameprot_F-serratus_M_contig643.17345.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1227
Homology
BLAST of mRNA_F-serratus_M_contig643.17345.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI)

HSP 1 Score: 800 bits (2065), Expect = 3.570e-269
Identity = 554/1240 (44.68%), Postives = 695/1240 (56.05%), Query Frame = 0
Query:    8 LTRLVDSLLRGRSSPSARHEAAAAMSDVRSFVRKWRKARRETGAPAKEKGLQGTESPSADVLLKLAQRGVHLHNNVRKLPQNKEGGSCGGSTGTGAGDWKSATIAYLRATAASLVSLGSTSSPKDCANLCRLFSKAGDMLVEAAEDDIRARAALEMFDDAQAFFSRLPSSFFGKEAQDSERLSLSAEDLVMAMHKASTRRIEVLSRTTGNVDEMVIGYEHQLSIISKFAPPGLSVSTATHAASVGEERFKKGDCRGASRLFRVSLRALGTDLGEGATAIST----GHTG-LRGTILFSLAHCYSQSGDHVQAIQCIKTLGDNRRHSTAG---DPDTTTFLFAKCKVLCDAGDFPGAHEAAEALVEASPPPVAETSGAVE-------LELAAARMVSRRDECSDRSLGLFSMIAARRWTGSPKEFDAQIALLHGLGVAVRVRSERCSA---AGTGNNRAGDALEIPGGPQKGAETVVKIAAKAEETAEKLIYGDKKPGARNL-TGQIGAALEVLITFVEFFQARKEWKACAKWCNRAIRLAEGLMSSPASVAAEPDDSAAAEPSMLAGLLTLRGEMECRLGEFGASTQSLDRALEVCPSYNRAREVAFWSASRDPTCDESSLSSRLSTLLGPRSGLDPRAQCEYLAFCVALVAETSAARDRTNDSGASTVGGTSSVHPMVWDGRIMMVQERLLDTLLMSQQNTTSTSVAHFQTSKDSVEGKSVESTEDALEQSRCGPGEHNSRALSTSANTKGAVA---MEVDEACDGGVCDA----AGLDG-PAARKSSVVSGAGNDGKPCGIVQVVASMVNMVLK-VRAAGTRSTATSTPSVYSVLSRVLQSIDKALSHASSLDINLPDDPDIDFLGKGCWNLAVKCCGPKCRLPCAVKITQHRAMGSDGNEGDNVGHTAARNHQDLLTLAPGFFKASRRWMEMRSNANEASALVARQNCTVLGMAAALEIYDRNYPSEGGFSSAQGAVVREARAILERCRQEVGVASGLNRQLGEVERGTGFETRPVILAAEINVLSRLGDAAAVRSLVAGRESDFLQCSTDLLCHCMQVVEDILDDNPSLAALCRLCIRRCAEDDPIDTSILGGLYRRLLTSSSSRNEALLVADEFSATARDLREGPGMPSDDVDYMAAKCYNLGLQMLEMERPTAAERFVGRALSLLKLGASKSFEGRWADTMHKVYCSALHTKEGNTSTSAGGFPGPSVERTTGRSIGRVSVGGAFRPTGIFPMP 1219
            + RLVDSLLRGR+  SARHEAA A+SD+R+FV  WR       APA +     TE                            EG     S G+G  D                    S + P              D L++ A+       ALEMF+DA+ +FSRLP SF+    Q     SLSAEDL+MA+HKAS+RRIEVLSRTTGNVD+MV GYE QL I++  +P GL +STA HAASVGEERFKKGDCRGASR+ R++L+A+G D+G G TA ++     HTG LR TILFSLAHC S+SGDH  AI+ IK L +       G   DP    FLFAKCKVL DAGD  GA+ AA+ALV  +P P  + +  V        L+LAAAR++S RD+CSDRSL LF+ IA+R + G+PK  DA++ALL GL +A R+RSE   A   +  G +  G A          A    +   +AE+TA+ +I   +  G  N+ T Q+ +ALEVL+TF EFFQ R +W++CA+WC RAI LA G             D A+    +LA LLTLRGEMECR G+F +S+Q+LD+AL +CP+Y RAREVAFWSA+RDP  DESSLS+RLS L GPR+ L P A+ EYLA CV LVA    A    +  G S  G         +D R+ MVQERLL+ LL+    TT        T        S  ST       + GP    S  +  +    G +A   M V+   D  V D      G D  P   +S+  +G G D  P   VQVVASMV+  L+ V     +    S     SVLSRVL S+DK L  A SL I   DDPDI +L  GCWNLAV+CCG  C LP   K+    +   D    D   HT  R   DLL LAP FFKASR W E+ S+AN   AL+ RQNC VL +AA LE+YD   P +G   +       E R +LER R+EV VA+GLNR L +V+     E R ++L AE++VL RLGD  AVRSLVA RE DFL+CST+LL +C+Q                                                +EALLV DEF+A +RDL+EGPGMPS+DVDY++AKCYNLGLQ+LEM RP  AERFVG+AL LLKLG+S +F  RW + +HKVY + L  K G+ +T+      P +   +G        G AF  TG+FPMP
Sbjct:    1 MARLVDSLLRGRAQASARHEAATAVSDIRAFVHAWR-----PDAPASKDEQDSTEP---------------------------EGRGRTRSHGSGGSD-------------------PSMNRPS------------ADTLLKLAQ-------ALEMFEDAEGYFSRLPGSFYATGWQKFGMPSLSAEDLIMAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLRMSTAVHAASVGEERFKKGDCRGASRILRLALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGWCAKGGGTDPPPK-FLFAKCKVLTDAGDLTGAYTAAKALVALTPAPSGKPTAGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASR-FAGTPKAVDARVALLSGLAMAARLRSEGGGAGWWSPDGQHEKGSAAA--------ATAENEAVGRAEKTADDMIA--EISGCNNVATYQVDSALEVLVTFTEFFQGRDKWESCARWCGRAINLATGDSKGSTPKRVPHADKASL---LLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLATCVGLVAGVRKATQDPDQRGESDAGNAR------YDSRVTMVQERLLEALLVEAPATTDMEKEAEPTQAQ----PSTSSTPHEAGSDKDGPA--GSAPVGGAGEDCGGIAPTPMVVEGEGDEDVGDVPVARTGADATPPGNRSAGSNGNGTDPVPTA-VQVVASMVDSALQWVSKEEIKVHRGSAEDAASVLSRVLLSVDKTLRRAGSLGIGPLDDPDIRYLSHGCWNLAVRCCGSNCDLPWGDKVGS--SASKDQMSVDEATHTE-RKRNDLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSK-PVDGAPLANATTSSSERRDMLERSRKEVEVATGLNRLLSDVKPDMATEMRSILLVAEMSVLGRLGDFVAVRSLVASREPDFLRCSTNLLQYCLQ------------------------------------------------DEALLVVDEFTAKSRDLQEGPGMPSEDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAK-GDAATATN----PIMAGGSGSQASTAIGGRAFLSTGLFPMP 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0V5_ECTSI3.570e-26944.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 251..589

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig643contigF-serratus_M_contig643:75030..87072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig643.17345.1mRNA_F-serratus_M_contig643.17345.1Fucus serratus malemRNAF-serratus_M_contig643 75030..87072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig643.17345.1 ID=prot_F-serratus_M_contig643.17345.1|Name=mRNA_F-serratus_M_contig643.17345.1|organism=Fucus serratus male|type=polypeptide|length=1227bp
MNERTAVLTRLVDSLLRGRSSPSARHEAAAAMSDVRSFVRKWRKARRETG
APAKEKGLQGTESPSADVLLKLAQRGVHLHNNVRKLPQNKEGGSCGGSTG
TGAGDWKSATIAYLRATAASLVSLGSTSSPKDCANLCRLFSKAGDMLVEA
AEDDIRARAALEMFDDAQAFFSRLPSSFFGKEAQDSERLSLSAEDLVMAM
HKASTRRIEVLSRTTGNVDEMVIGYEHQLSIISKFAPPGLSVSTATHAAS
VGEERFKKGDCRGASRLFRVSLRALGTDLGEGATAISTGHTGLRGTILFS
LAHCYSQSGDHVQAIQCIKTLGDNRRHSTAGDPDTTTFLFAKCKVLCDAG
DFPGAHEAAEALVEASPPPVAETSGAVELELAAARMVSRRDECSDRSLGL
FSMIAARRWTGSPKEFDAQIALLHGLGVAVRVRSERCSAAGTGNNRAGDA
LEIPGGPQKGAETVVKIAAKAEETAEKLIYGDKKPGARNLTGQIGAALEV
LITFVEFFQARKEWKACAKWCNRAIRLAEGLMSSPASVAAEPDDSAAAEP
SMLAGLLTLRGEMECRLGEFGASTQSLDRALEVCPSYNRAREVAFWSASR
DPTCDESSLSSRLSTLLGPRSGLDPRAQCEYLAFCVALVAETSAARDRTN
DSGASTVGGTSSVHPMVWDGRIMMVQERLLDTLLMSQQNTTSTSVAHFQT
SKDSVEGKSVESTEDALEQSRCGPGEHNSRALSTSANTKGAVAMEVDEAC
DGGVCDAAGLDGPAARKSSVVSGAGNDGKPCGIVQVVASMVNMVLKVRAA
GTRSTATSTPSVYSVLSRVLQSIDKALSHASSLDINLPDDPDIDFLGKGC
WNLAVKCCGPKCRLPCAVKITQHRAMGSDGNEGDNVGHTAARNHQDLLTL
APGFFKASRRWMEMRSNANEASALVARQNCTVLGMAAALEIYDRNYPSEG
GFSSAQGAVVREARAILERCRQEVGVASGLNRQLGEVERGTGFETRPVIL
AAEINVLSRLGDAAAVRSLVAGRESDFLQCSTDLLCHCMQVVEDILDDNP
SLAALCRLCIRRCAEDDPIDTSILGGLYRRLLTSSSSRNEALLVADEFSA
TARDLREGPGMPSDDVDYMAAKCYNLGLQMLEMERPTAAERFVGRALSLL
KLGASKSFEGRWADTMHKVYCSALHTKEGNTSTSAGGFPGPSVERTTGRS
IGRVSVGGAFRPTGIFPMPPGKEIDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf