prot_F-serratus_M_contig6419.17337.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6419.17337.1
Unique Nameprot_F-serratus_M_contig6419.17337.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length228
Homology
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 8.500e-21
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    3 WYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHN--LAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAAGRARREVAEEKRR 97
            WY Q+A+RA NQA+GRCIRH+ DYGVICLIDER   G   H   LAKW+RDL  D+     + DT+D+FF SAP FV+ +++ A   R++ +  +RR
Sbjct: 1359 WYAQEAYRAQNQALGRCIRHVYDYGVICLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVDTIDQFFASAPGFVREEKERAVVLRQQASVRRRR 1455          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.450e-20
Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    3 WYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHN--LAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAAGRARREVAEEKRR 97
            WY Q+A+RA NQA+GRCIRH+ DYGV+CLIDER   G   H   LAKW+RDL  D+     +  TMD+FF SAP FV+ +++ A   R + +  +RR
Sbjct:  662 WYAQEAYRAQNQALGRCIRHVYDYGVVCLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVGTMDQFFASAPGFVREEKERAAVLRHQASVRRRR 758          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A177WNB6_BATDL (DNA helicase n=5 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WNB6_BATDL)

HSP 1 Score: 81.3 bits (199), Expect = 4.720e-14
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFF 70
            EWY+  A+RALNQA+GRCIRH ND+G I L+DERF   R + NL+KW+R   R +  L E    +  FF
Sbjct:  808 EWYSMQAYRALNQALGRCIRHRNDWGAIILLDERFSQSRCTSNLSKWMRTKIRQWKTLQEAEAVLKSFF 876          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A1W0W690_SORBI (DNA helicase n=6 Tax=Andropogoneae TaxID=147429 RepID=A0A1W0W690_SORBI)

HSP 1 Score: 80.9 bits (198), Expect = 6.470e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 80
            EWY   AFRALNQA GRCIRH +DYG I LIDER+  GR    ++KW+R+  + +    E    + KFF++A + ++ K
Sbjct:  708 EWYCHQAFRALNQAAGRCIRHKSDYGGIILIDERYQEGRNVAYISKWLRNAIKKYDSFQETMAELQKFFQNAEEKIKIK 786          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A0L0DAS5_THETB (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DAS5_THETB)

HSP 1 Score: 80.9 bits (198), Expect = 6.530e-14
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAA 84
            +WYT  AFRALNQA+GRCIRH NDYG I L+DERF     + +L+KWVR   + F      G  +  F  +A +  + +  AA
Sbjct: 1248 KWYTLQAFRALNQALGRCIRHRNDYGSILLVDERFARSSIAPSLSKWVRTAIQSFPNPQAFGQALHNFHSAAAEAAEQRAAAA 1330          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A446TBW4_TRITD (Helicase ATP-binding domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446TBW4_TRITD)

HSP 1 Score: 80.5 bits (197), Expect = 8.540e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 80
            EWY   AFRALNQA GRCIRH  DYG I LIDER+   R   +++KW+++  + +    E  D M+KFF+ A + ++ K
Sbjct:  456 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 534          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: N1R1T5_AEGTA (Fanconi anemia group J protein-like protein n=1 Tax=Aegilops tauschii TaxID=37682 RepID=N1R1T5_AEGTA)

HSP 1 Score: 80.5 bits (197), Expect = 8.580e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 80
            EWY   AFRALNQA GRCIRH  DYG I LIDER+   R   +++KW+++  + +    E  D M+KFF+ A + ++ K
Sbjct:  548 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 626          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A3B6LQP8_WHEAT (Helicase ATP-binding domain-containing protein n=5 Tax=Triticinae TaxID=1648030 RepID=A0A3B6LQP8_WHEAT)

HSP 1 Score: 80.5 bits (197), Expect = 8.810e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 80
            EWY   AFRALNQA GRCIRH  DYG I LIDER+   R   +++KW+++  + +    E  D M+KFF+ A + ++ K
Sbjct:  704 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 782          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: A0A3B6KNE2_WHEAT (Helicase ATP-binding domain-containing protein n=16 Tax=Triticinae TaxID=1648030 RepID=A0A3B6KNE2_WHEAT)

HSP 1 Score: 80.5 bits (197), Expect = 8.870e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKSAPDFVQTK 80
            EWY   AFRALNQA GRCIRH  DYG I LIDER+   R   +++KW+++  + +    E  D M+KFF+ A + ++ K
Sbjct:  785 EWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIKIK 863          
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Match: S8CNP1_9LAMI (HELICc2 domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CNP1_9LAMI)

HSP 1 Score: 75.1 bits (183), Expect = 8.980e-14
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    2 EWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVRDLPRDFTRLSEMGDTMDKFFKS 72
            EWY Q AFRALNQAIGRCIRH  DYG I  +DERF   R    ++KW+R+  + +    E  +++  FF++
Sbjct:   51 EWYCQQAFRALNQAIGRCIRHRFDYGAIIFLDERFHRERNRVYISKWLRNTIKLYDSFEESLESLKSFFQN 121          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6419.17337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZN2_9PHAE8.500e-2151.55Helicase ATP-binding domain-containing protein n=1... [more]
D8LEJ0_ECTSI1.450e-2050.52Helicase ATP-binding domain-containing protein n=1... [more]
A0A177WNB6_BATDL4.720e-1452.17DNA helicase n=5 Tax=Batrachochytrium dendrobatidi... [more]
A0A1W0W690_SORBI6.470e-1446.84DNA helicase n=6 Tax=Andropogoneae TaxID=147429 Re... [more]
A0A0L0DAS5_THETB6.530e-1445.782-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A446TBW4_TRITD8.540e-1446.84Helicase ATP-binding domain-containing protein n=1... [more]
N1R1T5_AEGTA8.580e-1446.84Fanconi anemia group J protein-like protein n=1 Ta... [more]
A0A3B6LQP8_WHEAT8.810e-1446.84Helicase ATP-binding domain-containing protein n=5... [more]
A0A3B6KNE2_WHEAT8.870e-1446.84Helicase ATP-binding domain-containing protein n=1... [more]
S8CNP1_9LAMI8.980e-1447.89HELICc2 domain-containing protein (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableGENE3D3.40.50.300coord: 1..51
e-value: 1.9E-15
score: 58.9
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 2..86
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 2..86
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 1..51
e-value: 8.3E-18
score: 65.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6419contigF-serratus_M_contig6419:17341..19945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6419.17337.1mRNA_F-serratus_M_contig6419.17337.1Fucus serratus malemRNAF-serratus_M_contig6419 17341..19945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6419.17337.1 ID=prot_F-serratus_M_contig6419.17337.1|Name=mRNA_F-serratus_M_contig6419.17337.1|organism=Fucus serratus male|type=polypeptide|length=228bp
QEWYTQDAFRALNQAIGRCIRHLNDYGVICLIDERFLNGRQSHNLAKWVR
DLPRDFTRLSEMGDTMDKFFKSAPDFVQTKQKAAGRARREVAEEKRRCAT
ALVTVTATAAVTAAATAATAESVAVVLTPGGVCYRGPDCREERPGTGTIS
GGIVKGAGEGVPVGDSLRDSEADADVIILTPPAASCCGSLTSTPRAVDPG
VPTPDIVRDAPRCSRTESGRSGSARPKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C