prot_F-serratus_M_contig64.17307.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig64.17307.1
Unique Nameprot_F-serratus_M_contig64.17307.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length355
Homology
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A7S0SGK9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGK9_9CHLO)

HSP 1 Score: 108 bits (271), Expect = 1.510e-23
Identity = 87/249 (34.94%), Postives = 133/249 (53.41%), Query Frame = 0
Query:   14 LRQPFGSSASIKLLNRGASQEPSFGAGNHLEAMAVAMQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKAS-SSYGLGALQSVCFDKIGREATRGETFYSGMVGAVVRLLGDA--SPRVQARALGTVHNLSTDARSIGIIREEGGMSLL 259
            L  P  +     L + G +Q        H  A+A+ ++ F+ AN+DP  + P   D+  D M  +   + + +   +  + L  LK      LK+L RKQ NR+S GR G+ AV  LL +    + ++ E ANV LN+CY+ ENV   +  GGL   EPL+R   E+      +   GA+QS+CF + GR   R      G V A++RLLG+   + +VQ RA+G +HN+S+DA SI +IR + G+ L+
Sbjct:   14 LMSPTSADLHALLTSTGGAQR--MPRARHDAALAM-LRDFVTANEDPRVS-PNYKDDRPDQMDGLFTLMSAPECAADEDLALHALKA-----LKILSRKQENRQSFGRRGLNAVLRLLVAP-PSSRVAGEGANVILNVCYEKENVDAILMCGGL---EPLVRFLGERTDPDLQANAAGAIQSICFQEKGRARVRD---LDG-VPAMLRLLGECRGNVKVQTRAIGAIHNMSSDADSIRLIRAQEGIPLV 245          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: C1EIP6_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIP6_MICCC)

HSP 1 Score: 95.9 bits (237), Expect = 2.590e-18
Identity = 78/238 (32.77%), Postives = 114/238 (47.90%), Query Frame = 0
Query:   32 SQEPSFGAGNHLEAMAVAMQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDL-LSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGLGALQSVCFDKIGREATRGETFYSGMVGAVVRL------------LGDASPRVQARALGTVHNLSTDARSIGIIREEGGM 256
            SQ  S       E +A  ++ F+ AN+D  A+  L+ DE  D++  I + L  G    +  + LL LK      LK+L RK+ NRR  GRE  RAV  L L+       +++E ANV LN CY+ ENV H +E GG+  L   +    E  +  S+   GA+QSVCF   GR   R     + +V  +  L              D     +AR +G +HN+S D  +I ++R   G+
Sbjct:   17 SQRASGPLSGRREQVARTLREFVDANEDARASPNLR-DERRDELGGITSLLTDGDLPGDQDLALLALKT-----LKILSRKEDNRRRFGRELCRAVVRLALTHPRASHAVTAEGANVVLNACYEKENVEHVLECGGVQPLVRRVADTGESWRCRSAAA-GAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRREGGTRDSSFTDDERSMCRARVVGALHNVSADDDAIRLVRLSDGV 247          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A7S0IGD7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGD7_MICPS)

HSP 1 Score: 91.7 bits (226), Expect = 8.850e-17
Identity = 78/240 (32.50%), Postives = 113/240 (47.08%), Query Frame = 0
Query:   32 SQEPSFGAGNHLEAMAVAMQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDL-LSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGLGALQSVCFDKIGREATRGETFYSGMV--------------GAVVRLLGDASPRVQARALGTVHNLSTDARSIGIIREEGGM 256
            SQ  S       E +A  ++ F+ AN+   A+  L+ DE  D++  I + L  G    +  + LL LK      LK+L RK+ NRR  GRE  RAV  L L+       +++E ANV LN CY+ ENV + +E GG+  L   +    E L+  S+   GA+QSVCF   GR   R     + +V              G+  R   D     +AR +G +HN+  D  +I  IR   G+
Sbjct:   44 SQRASGPLSGRREQVARTLREFVDANEGARASPNLR-DERRDELGGITSLLTDGDLPGDQDLALLALKT-----LKILSRKEDNRRRFGRELCRAVVRLALTHPRASHAVTAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCRSAAA-GAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRASMPRDGSAGRFTDDERSMCRARVVGALHNVGADDDAIRAIRACDGI 276          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A5B8MZ58_9CHLO (ARM repeat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ58_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 2.150e-16
Identity = 54/146 (36.99%), Postives = 85/146 (58.22%), Query Frame = 0
Query:  106 LKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGLGALQSVCFDKIGREATRGETFYSGMVGAVVRLLGDASPRVQARALGTVHNLSTDARSIGIIR 251
            LK+L RKQ NRR++   G + +            +++ECANV LN CY+ +NV  F+  GG+  LE  + S    ++A+++   GALQSV + + GR+         G++  +V LL    P+V+ARA+G +HNLS++  +I IIR
Sbjct:  106 LKILSRKQRNRRAIVLTGFKHLASCADFVRNVPTLAAECANVLLNFCYERQNVGLFLSCGGVKVLETYLESEDRGVQANAA---GALQSVSYHEEGRKELLAS---EGLLPRIVNLLASQEPKVRARAVGALHNLSSEPGTIRIIR 245          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A836CNB1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.250e-15
Identity = 75/202 (37.13%), Postives = 97/202 (48.02%), Query Frame = 0
Query:   21 SASIKLLNRGASQEPSFGAGNHLEAMAVAMQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGLGALQSVCFDKIGREATRGETFYSGMVGAVVRLL 222
            SA + L +  A+   S G+         A+  FL  N DP  +  L   E VDD   +  A+  G    +P  +L LL+V     LK LMRK  NRR+ G      V  LLS+  L A  + ECANV LN+CY++ NV  F + GG+  L  ++        A     LGALQS+CFD  GRE  R     SG V  V  LL
Sbjct:    3 SAGVDLNDINAALRRSPGS-----CFTTAVDAFLRCNADPARSPNLNFPE-VDDTVLLYNAVAVGPGAHSPVRLLSLLRV-----LKYLMRKPANRRATGPTCAATVAMLLSNEALSADCACECANVVLNLCYETANVGLFCKHGGMAGLLRMLSPSCSV--ALHVAALGALQSLCFDAAGRERAR----VSGAVDLVAALL 187          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A7S3DH06_9EUKA (Hypothetical protein n=3 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DH06_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 1.960e-11
Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   43 LEAMAVAMQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISS--------------ECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKAS 184
            LE +   M +F++AN+DP+++   +  E  DDM  +++  +      +  + +L LK+     L+++ RK+ NRR++  E VRAV  +L    LD  + S              E A+  LN+CY+ ENV  FV+ GG   L PL+ S  E+L AS
Sbjct:   75 LETLKPQMNKFILANEDPSSSPNFEESEQQDDMNGLVSCFQLLPYLSDDDVSVLALKM-----LRIVARKEVNRRAVDGEVVRAVLSILIKKGLDGKVGSTDPGVRPQARAIVCEAASCMLNICYEKENVMLFVQHGGTEVLCPLLASADEELVAS 225          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A3P3YJC6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJC6_PLABS)

HSP 1 Score: 71.2 bits (173), Expect = 2.990e-10
Identity = 63/210 (30.00%), Postives = 106/210 (50.48%), Query Frame = 0
Query:   46 MAVAMQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGLGALQSVCFDKIGREATRGETFYSGMVGAVVRLLGDAS----PRVQARALGTVHNLSTDARSIGIIR 251
            +A AM+ F+  N  P ++  L      DD+ A ++ +   +  + P  +   L   S  ILK+L RK  NR   G   + AV   +S++     +++ CANV +N C++   V H V L G+P +  L+   H  +  +++   G L+SV  ++ GR+A       +  +  +V LL        PRV ARA+ T+HNL+ D ++IG +R
Sbjct:   11 VADAMRAFVHDNALPESSPYLLASLPPDDVDAFVSVVV--RVWRCPDSVAEDLLQSSLNILKILCRKDCNRFQFGVRAIGAVVAAMSNSTSMEVLAA-CANVLMNACHNRSCVDHLVALNGVPGIVQLLECKHAGVVCAAA---GVLRSVACERTGRQAI----LQTRAIPLLVPLLSAPQEGPIPRVCARAIATLHNLTCDHQAIGQLR 210          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A7S1CKE5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKE5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.140e-7
Identity = 43/140 (30.71%), Postives = 76/140 (54.29%), Query Frame = 0
Query:   50 MQRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKVRSGQILKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGL 189
            +  F+V N+    +  L+G +A DDM A+   L +     +  +  +LL      + K+L+RK GNRR +G  G++ + +++     +  ++   ANV LN+CY+S+NV   +++GG   L  L++S  E L AS+   L
Sbjct:   80 LDAFVVGNEAAADSPNLRGADA-DDMAALTRLLGAAHASGDAELAEVLL-----CMFKILLRKLGNRRGIGEIGIKTIVNVMRDP-PNGKVAKAGANVMLNLCYESDNVDTVLDMGGADPLVRLLQSPDEDLCASACGAL 212          
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Match: A0A2K1L8Q7_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8Q7_PHYPA)

HSP 1 Score: 57.0 bits (136), Expect = 2.280e-5
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  106 LKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALNMCYDSENVRHFVELGGLPALEPLIRSGHEQL 181
            LKVL RK+ NR++LG++ +  +   LS   +D  I +E ANV LN+CY+ +NVR  +  GG   L   + S  E+L
Sbjct:   48 LKVLSRKETNRKALGQKAIAQLLKHLSDHSVDTKILAEGANVVLNVCYERDNVRALLACGGASTLVEFLTSKDEEL 123          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig64.17307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A7S0SGK9_9CHLO1.510e-2334.94Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
C1EIP6_MICCC2.590e-1832.77Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S0IGD7_MICPS8.850e-1732.50Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A5B8MZ58_9CHLO2.150e-1636.99ARM repeat domain-containing protein n=1 Tax=Chlor... [more]
A0A836CNB1_9STRA1.250e-1537.13Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S3DH06_9EUKA1.960e-1132.69Hypothetical protein n=3 Tax=Palpitomonas bilix Ta... [more]
A0A3P3YJC6_PLABS2.990e-1030.00Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S1CKE5_9STRA2.140e-730.71Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2K1L8Q7_PHYPA2.280e-540.79Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 243..283
e-value: 0.018
score: 24.2
coord: 284..324
e-value: 1.2
score: 18.2
coord: 154..194
e-value: 20.0
score: 10.9
coord: 202..242
e-value: 11.0
score: 12.9
IPR000225ArmadilloPFAMPF00514Armcoord: 249..283
e-value: 2.0E-4
score: 21.3
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 254..296
score: 10.552
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 213..255
score: 10.692
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 203..350
e-value: 8.0E-19
score: 69.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 69..202
e-value: 1.6E-5
score: 26.2
NoneNo IPR availablePANTHERPTHR15599RTDR1coord: 207..323
coord: 119..240
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 104..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig64contigF-serratus_M_contig64:275195..286978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig64.17307.1mRNA_F-serratus_M_contig64.17307.1Fucus serratus malemRNAF-serratus_M_contig64 275142..287122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig64.17307.1 ID=prot_F-serratus_M_contig64.17307.1|Name=mRNA_F-serratus_M_contig64.17307.1|organism=Fucus serratus male|type=polypeptide|length=355bp
MMTESTLDGINRLLRQPFGSSASIKLLNRGASQEPSFGAGNHLEAMAVAM
QRFLVANKDPTATLPLQGDEAVDDMRAILAALKSGQPRKNPRIMLLLLKV
RSGQILKVLMRKQGNRRSLGREGVRAVTDLLSSACLDACISSECANVALN
MCYDSENVRHFVELGGLPALEPLIRSGHEQLKASSSYGLGALQSVCFDKI
GREATRGETFYSGMVGAVVRLLGDASPRVQARALGTVHNLSTDARSIGII
REEGGMSLLVRLLRSHEAHACGAAAGTIQNLSREERSRAVLTSLGAVEPL
ADLLVGRHVKSQISAAGALVNIVGPDLKGAQQRQLLRRVLTDGIVLGVME
SCMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold