prot_F-serratus_M_contig64.17303.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig64.17303.1
Unique Nameprot_F-serratus_M_contig64.17303.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length453
Homology
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: D8LI39_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI39_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 8.440e-69
Identity = 170/411 (41.36%), Postives = 207/411 (50.36%), Query Frame = 0
Query:    1 MTAREGRAAAHRAGMRAGDWQAERQLQEALQESRRVRPEGRGDRGGQSQRGGGGVSIAANRQDAADSAEAEAEKSVLEAGLRTLSPRRSAVGREDGEDE------------------DDAPGQARPSNAPDAEDGFDSDVTTLPRDHENYGGHELVITQDGGVNPMTL----------------------EIERGATSGAGAGTALSSKAAMSASGRRRADESTVSEAAWRGRSKESVADEGQGGKGDNEGEEREGLEDQEKVASPRRRKDAVLTLPDDALHRIMLFLHPEDISECRAVNSLWTFPQHEAVFEGLCRRTYPNQTVKKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKE 371
            MTAREG+ AA  AGMRAGDWQAERQLQEAL+ESR+                GG V +A++ +    S   + E S ++ G   L+   +AV  E+GE E                                                E+YG  ELV+TQDGG+ P+                                            A    G   AD   + + A       +  DE QG               +E    P    D VLT+PDD LHR MLFL+PEDI ECRAV+S W+FP HE V+EGLCRRTY  Q+ KK LNVKRWRSWQ MFK RPRLR +GLYSLKTTY+K PVRDMST W PG +L VTYYRYF+F+GDGRVAY LTHE P +F+R+L++
Sbjct:   69 MTAREGKDAARLAGMRAGDWQAERQLQEALRESRQD---------------GGPVGVASSLE---GSGREDDEASFVDTGFHALAT--NAVEGEEGEGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDYGDVELVVTQDGGIIPVATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEDVGAAAADNEHLPKIA-------TAMDEEQG---------------EEVTPLP---PDIVLTMPDDILHRTMLFLNPEDIFECRAVSSRWSFPGHENVYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFKFFGDGRVAYALTHEPPKDFVRMLQD 434          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A0A482SKV1_9ARCH (FBO_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKV1_9ARCH)

HSP 1 Score: 119 bits (298), Expect = 2.200e-26
Identity = 71/198 (35.86%), Postives = 105/198 (53.03%), Query Frame = 0
Query:  236 LPDDALHRIMLFLHPEDISECRAVNSLWTFPQHEAVFEGLCRRTYPNQTVKKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLK----EGSPKIFFGSYTINKWEVKVEVPLPWSRVSFSLQLAN------GERGRFTHLVLVSHTS 423
            LP + + RI++ L   D+S    + S   F   EAVF+ LC + Y  QTVKKTL + RWRSW+ M   RPRLRT+G Y+LKT Y K+   D          +E+ Y+R+FRF+ +  V Y L   +  E ++         + +++ G Y + +  + VEVPLP+  + F L + +      G  GR   L L SH+S
Sbjct:  123 LPQELVDRILMLLGDADMSGYLCMASKTVFQPSEAVFKQLCMQIYLKQTVKKTLQIDRWRSWKSMLVHRPRLRTNGFYTLKTVYTKAYCNDAFWEEKQTQSIELRYFRHFRFFLNNTVLYSLDITESREMIKHFDGTAYSNNKRVYKGVYRMQRNVIHVEVPLPYCMMMFELTIGDTKECDEGGSGRHNLLTLTSHSS 320          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A0A6H5KRR7_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.100e-18
Identity = 102/314 (32.48%), Postives = 142/314 (45.22%), Query Frame = 0
Query:    1 MTAREGRAAAHRAGMRAGDWQAERQLQEALQESRRVRPEGRGDRGGQSQRGGGGVSIAANRQDAADSAEAEAEKSVLEAGLRTLSPRRSAVGREDGE-------DEDDAPGQARPSNAPDAEDGFDSDVTTLPRDHEN----------YGGHELVITQDGGVNPMTLEIERGATSGAGAGTALSSKAAMSASGRRRAD-----------ESTVSEAAWRGRSKESVADEGQGGK------GDNEGEEREGLEDQEKVASPRRRKDAVLTLPDDALHRIMLFLHPEDISECRAVNSLWTFPQHEAVFEGLCRRTY 280
            MTAREG+ AA RAGMRAGDWQAERQLQEAL+ESR+                 G V + +  + +    +   E S ++ G   L+   +A+  E+GE       D + A  + +P                                 YG  ELV+TQDGG+ P+       A    G G+                            +  +++ A+ G  +  VA E  G         D+  +    +++++         D VLTLPDD LHR MLFL+PEDI ECRAV++ W+FP+HE V+EGLCRRTY
Sbjct:   66 MTAREGKDAARRAGMRAGDWQAERQLQEALRESRQDD---------------GPVGVTSILEGSGREGD---EASFVDMGFHALAT--NALEGEEGEGEAATAADTEVASSRGQPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDVELVVTQDGGIIPV-------AAGSVGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXHDHKLAKKAFEGGVRVGVAAEDVGAAXXXXXXADHLPKNATAIDEEQGEEVTPLPPDIVLTLPDDILHRTMLFLNPEDIFECRAVSTRWSFPEHEKVYEGLCRRTY 352          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A0A8H7VMP6_9FUNG (F-box domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VMP6_9FUNG)

HSP 1 Score: 71.2 bits (173), Expect = 1.190e-9
Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = 0
Query:  278 RTYPNQTVKKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKEGSPK--IFFGSYTINKWEVKVEVPL-----PWSRVSFSLQLANGERGRFTHLVLVSHTS 423
            R Y  + VK   N      W GMF  RPRLR  G+Y +    Y  P R  + +W   V L VTYYRY RF+ DGR+   L+ E+P + +RLL     +  +F G + ++    +V V +     P  R +  L + +  RGR   L  +S+TS
Sbjct:  274 RLYQTEFVKTLYNG----YWLGMFIERPRLRYDGVY-ISVCQYIRPGRSDTNAWTQPVHL-VTYYRYLRFFPDGRIVKYLSTEEPKDVIRLLTPDFSRRQVFHGKFCLDDDNGQVAVEMRDKTRPRDRFNMLLYIKSTSRGRHNKLGWLSYTS 420          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: D8R5V6_SELML (F-box domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5V6_SELML)

HSP 1 Score: 66.2 bits (160), Expect = 2.550e-8
Identity = 52/169 (30.77%), Postives = 78/169 (46.15%), Query Frame = 0
Query:  236 LPDDALHRIMLFLHPEDISECRAVNSLWTFPQHEAVFEGL-CRRTYPNQTV---KKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKEGSPK--IFFGSYTINKWEVKVEVPLPWSR 398
            L +D LH I + L P  + +   V   W +     VF  L C +T+    V   +K L+     SW+ M+  RPRLR  G+Y  + TY ++ V +     V   V  V YYRY RF+ +GR  Y  T  +  E  + +   + K   + G YT+ + +V   V  P  R
Sbjct:   55 LSEDILHEIFMRLSPYTLGKASCVCRKWRYAIRNPVFWRLACLKTWQLHGVEGNRKILSQNYDGSWRKMWHHRPRLRFDGIYVSRNTYIRAGVAEWK---VTNPVHLVCYYRYIRFFPNGRFLYKNTALRLKEIAKTMNRRATKENTYGGRYTLAQSQVDAAVVYPGLR 220          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A0A7J7MD57_9MAGN (F-box domain-containing protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7MD57_9MAGN)

HSP 1 Score: 65.5 bits (158), Expect = 5.760e-8
Identity = 54/199 (27.14%), Postives = 91/199 (45.73%), Query Frame = 0
Query:  236 LPDDALHRIMLFLHPEDISECRAVNSLWTF----PQHEAVFEGLCRRTY----PNQTVKKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNE---FMRLLKEGSPKIFFGSYTINKWEVKVEVPLPWSR---VSFSLQLANGERGRFTHLVLVS 420
            LPD+ L+ +   ++P  + +   V   W +    P H   +   C RT+    P +  +  L  K   SW+ M+ LRPR+RT GLY  + TY +  + +     V   V  V YYRY RF+ +G+  Y  + +K  +   +M      +  +F G YT+   +V+  +  P  R   +   L+L    +G    + L+S
Sbjct:   88 LPDELLYEVFARMNPYSLGKAACVCRKWRYTIRIPLH---WRNACLRTWQISGPVENYR-ILQSKYDGSWRKMWLLRPRIRTDGLYVSRNTYIRVGIAEWR---VYNPVHLVCYYRYMRFFPNGKFLYMNSSQKLKDVAKYMNFRASKTESVFSGKYTLTDDKVEAAILYPGLRPTVLRIRLRLRGTTQGANNRMDLLS 279          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A9SN35_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SN35_PHYPA)

HSP 1 Score: 62.8 bits (151), Expect = 3.570e-7
Identity = 51/196 (26.02%), Postives = 89/196 (45.41%), Query Frame = 0
Query:  235 TLPDDALHRIMLFLHPEDISECRAVNSLWTFPQH-EAVFEGLCRRTYP---NQTVKKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKEGSPKI---FFGSYTINKWEVKVEVPLPWSR---VSFSLQLANGERGRFTHLVLVS 420
            +LPD+ L  + + L P  +     V   W +     +++   C +T+     Q  ++    K   SW+ M+  RPRLR  GLY  + TY ++ + +     +   V  V YYRY RF+ +G+  Y  T  +  E  + ++  + K+   F G   ++  +V+  V  P SR   +   L+L     G +  L L+S
Sbjct:   54 SLPDELLQEVFMRLSPYWLGRAACVCRKWRYATRMPSLWRNACLKTWQVSGRQENERLCAEKYGGSWRAMWHDRPRLRFDGLYVSRNTYIRTGIAEWK---ITNPVHLVCYYRYLRFFPNGKFLYKTTPLRVKEVAKTMQGRAAKLDGLFSGRCMLDGTQVEAAVIYPGSRPTVLRIRLRLRGTIPGAYNRLDLLS 246          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A0A1C7NRL0_9FUNG (F-box protein pof7 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NRL0_9FUNG)

HSP 1 Score: 62.0 bits (149), Expect = 1.110e-6
Identity = 57/205 (27.80%), Postives = 92/205 (44.88%), Query Frame = 0
Query:  232 AVLTLPDDALHRIMLFLHPEDISE----CRAVNSLWTFPQHEAVFEGLCRRTYPNQTVKKTLNVKRWRS----------WQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKEGSPK--IFFGSYTINKWE----VKVEVPLPWSRVSFSLQLANGERGRFTHL 416
            A+  LP + +  I+  L    +S      R     + + +  ++++  C R +   ++  TL   R R           W  MF  RPR+R  GLY + T +Y  P     T+W   + L VTYYRY RF+ DGR+   +T E+P   ++ L+ G  K   F G +T++  +    V  +  LP      SL++    RG+   L
Sbjct:  208 AIAKLPSEIILNILKILVLHSVSTIPYFARVCKKFFLYTRDPSIWQYACIRVFREPSM--TLADSRQRCMEYVQKFDGHWMRMFIDRPRIRYDGLY-ISTCHYIRPGTS-DTAWNKPIHL-VTYYRYLRFFPDGRILKHVTTEEPAHVVKQLQLGFNKKQSFHGQFTMDAEDHISIVMKDFTLPRETFRLSLKIKTTHRGKHNKL 407          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: UPI0009E47202 (F-box protein 7 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E47202)

HSP 1 Score: 60.5 bits (145), Expect = 2.130e-6
Identity = 44/169 (26.04%), Postives = 77/169 (45.56%), Query Frame = 0
Query:  236 LPDDALHRIMLFLHPEDISECRAVNSLWTFPQHEAV-FEGLCRRTYPNQ---TVKKTLNVKRWRSWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKEGSPK--IFFGSYTINKWEVKVEVPLPWSR 398
            LPD+ L  + L + P  +     V   W +  H  + +   C +T+      T  K +      SW+ M+  RPR+R  GLY  + TY ++ V +     V   V  V Y+RY RF+ +G+  Y ++ +K  E  +++   S    +F G  T++  ++   +    SR
Sbjct:   63 LPDELLFEVFLRMSPFSLGRAACVCRKWRYTIHNPILWRRACLKTWQLSGALTNYKMVQFMFEGSWRKMWISRPRIRNDGLYVSRNTYIRTGVAEWK---VTNPVHLVCYFRYLRFFPNGKFLYKISSQKVKEVAKIMIRASKAECVFQGESTLSDDQINAVLVYSGSR 228          
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Match: A0A5P1EBA5_ASPOF (F-box domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EBA5_ASPOF)

HSP 1 Score: 59.7 bits (143), Expect = 3.810e-6
Identity = 41/173 (23.70%), Postives = 81/173 (46.82%), Query Frame = 0
Query:  235 TLPDDALHRIMLFLHPEDISECRAVNSLWTFP-QHEAVFEGLCRRTYPNQTVKKTLNVKRWR---SWQGMFKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGDGRVAYGLTHEKPNEFMRLLKEGSPK---IFFGSYTINKWEVKVEVPLPWSRVS 400
            +LPD+ ++ +     P  +     V   W +  ++ ++++  C R +      +   +       SW+ M+  RPR+R  GLY  + TY +  V +     V   V  V YYRY RFY +GR+ Y ++ ++  E  + +   + K   ++ G Y + + +V+  +  P  R++
Sbjct:   62 SLPDELIYEVFARADPYSLGRAACVCRKWRYTIRNPSLWQNACLRAWQLSGASENYKIVTSMYDCSWRKMWTHRPRVRFDGLYVSRNTYVRVGVAEWK---VTNPVHLVCYYRYIRFYPNGRLLYKVSSQRVKEAAKCMHLRASKPDCVYKGEYRLAEDQVEAAILYPGVRLT 231          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig64.17303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LI39_ECTSI8.440e-6941.36F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A482SKV1_9ARCH2.200e-2635.86FBO_C domain-containing protein n=1 Tax=archaeon T... [more]
A0A6H5KRR7_9PHAE4.100e-1832.48F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8H7VMP6_9FUNG1.190e-934.64F-box domain-containing protein n=1 Tax=Mucor circ... [more]
D8R5V6_SELML2.550e-830.77F-box domain-containing protein n=2 Tax=Selaginell... [more]
A0A7J7MD57_9MAGN5.760e-827.14F-box domain-containing protein n=2 Tax=Magnoliops... [more]
A9SN35_PHYPA3.570e-726.02Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A1C7NRL0_9FUNG1.110e-627.80F-box protein pof7 n=1 Tax=Choanephora cucurbitaru... [more]
UPI0009E472022.130e-626.04F-box protein 7 n=1 Tax=Phalaenopsis equestris Tax... [more]
A0A5P1EBA5_ASPOF3.810e-623.70F-box domain-containing protein n=2 Tax=Asparagus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 217..310
e-value: 7.8E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR12874:SF9F-BOX ONLY PROTEIN 9coord: 230..429
NoneNo IPR availablePANTHERPTHR12874FAMILY NOT NAMEDcoord: 230..429
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 219..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig64contigF-serratus_M_contig64:238028..250211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig64.17303.1mRNA_F-serratus_M_contig64.17303.1Fucus serratus malemRNAF-serratus_M_contig64 237607..250229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig64.17303.1 ID=prot_F-serratus_M_contig64.17303.1|Name=mRNA_F-serratus_M_contig64.17303.1|organism=Fucus serratus male|type=polypeptide|length=453bp
MTAREGRAAAHRAGMRAGDWQAERQLQEALQESRRVRPEGRGDRGGQSQR
GGGGVSIAANRQDAADSAEAEAEKSVLEAGLRTLSPRRSAVGREDGEDED
DAPGQARPSNAPDAEDGFDSDVTTLPRDHENYGGHELVITQDGGVNPMTL
EIERGATSGAGAGTALSSKAAMSASGRRRADESTVSEAAWRGRSKESVAD
EGQGGKGDNEGEEREGLEDQEKVASPRRRKDAVLTLPDDALHRIMLFLHP
EDISECRAVNSLWTFPQHEAVFEGLCRRTYPNQTVKKTLNVKRWRSWQGM
FKLRPRLRTSGLYSLKTTYYKSPVRDMSTSWVPGVVLEVTYYRYFRFYGD
GRVAYGLTHEKPNEFMRLLKEGSPKIFFGSYTINKWEVKVEVPLPWSRVS
FSLQLANGERGRFTHLVLVSHTSVPRNEPRANRCHHRVKSSDHFTFERML
QF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf