prot_F-serratus_M_contig64.17301.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig64.17301.1
Unique Nameprot_F-serratus_M_contig64.17301.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length86
Homology
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BLAST of mRNA_F-serratus_M_contig64.17301.1 vs. uniprot
Match: D8LI36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI36_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 3.520e-40
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 0 
Query:    1 GGKKRGGELTFDLKGQQFSGQIIPSATVLVVGVGRTEAKIEGVFSEVCRLDYKRNVLEAMGGEVLKGEMDKSYIYEEEDVNVHG 84
            GGKK+G  LTFDLKGQQFSGQIIPSATV+VVG+G+TEAK+EG+FSEVCRLDYK NV +AMGGEVLKGEMD SY +EEEDVN  G
Sbjct:   99 GGKKKGRGLTFDLKGQQFSGQIIPSATVMVVGIGKTEAKVEGLFSEVCRLDYKGNVFDAMGGEVLKGEMDDSYKFEEEDVNARG 182
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig64.17301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI36_ECTSI3.520e-4080.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033246DNA-binding protein BIN4PANTHERPTHR34810FAMILY NOT NAMEDcoord: 6..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig64contigF-serratus_M_contig64:206288..208469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig64.17301.1mRNA_F-serratus_M_contig64.17301.1Fucus serratus malemRNAF-serratus_M_contig64 206288..208469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig64.17301.1 ID=prot_F-serratus_M_contig64.17301.1|Name=mRNA_F-serratus_M_contig64.17301.1|organism=Fucus serratus male|type=polypeptide|length=86bp
GGKKRGGELTFDLKGQQFSGQIIPSATVLVVGVGRTEAKIEGVFSEVCRL
DYKRNVLEAMGGEVLKGEMDKSYIYEEEDVNVHGRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033246BIN4