prot_F-serratus_M_contig64.17299.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig64.17299.1
Unique Nameprot_F-serratus_M_contig64.17299.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length338
Homology
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BLAST of mRNA_F-serratus_M_contig64.17299.1 vs. uniprot
Match: D7G5D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D7_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 5.190e-41
Identity = 103/245 (42.04%), Postives = 139/245 (56.73%), Query Frame = 0 
Query:   96 DIDPLDAGPDIVGSLLEDEDEGIEDQEDGGVYGGETIAAAPSIRKRLGVKASAVVLEEDDXXXXXXXXXXXXXXXXXXXXXXXXXTRK------RGDPFMPKGAPGPLDWREFASLKEGVRGHLVVFHTGFPKDQAVADSLIRQVKERFGDVVHVHEEFDDDEDTTEQERQESNAFEVWLEGPEVIVYHARGECNVDLTEEQMGKILDDLETRVGDESILQIPCTKAPRFLIPGLTPLELQSRSY 334
            D+DPL+AGPD    LL+ E E +  Q++   Y  E  AA  +          A + E   XXXXXXXXX                 RK      R DP MP+G   P +W + A L EGVRG LVV HTG PKD+  A  ++  VKER+G V+H HE +DDDE+ T+ +R+++  FEVWLEGP ++ YH R +  +DL +EQ+ KILDDLE RV DE+IL     +  +F +PG T  E + + +
Sbjct:    6 DMDPLEAGPDPDEILLQGEPELLRQQQEEEDYEVELAAAEAATVAAGKAPTKAELAEXXXXXXXXXXXXREGGGADEAAMAALGPKRKKRVEKARIDPLMPRGGVAPNEWLDMADLAEGVRGILVVCHTGLPKDKKRAAEIMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTIVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQF 250
[Close]
BLAST of mRNA_F-serratus_M_contig64.17299.1 vs. uniprot
Match: A0A6H5JXG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG7_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.500e-39
Identity = 110/297 (37.04%), Postives = 149/297 (50.17%), Query Frame = 0 
Query:   45 ASSPWAGSNRSRTALVARRQRIGLRTAPFPGLT-LGAGMADDDDVDPLEAELDIDPLDAGPDIVGSLLEDEDEGIEDQEDGGVYGGETIAA-APSIRKRLG-----VKASAVVLEEDDXXXXXXXXXXXXXXXXXXXXXXXXXTRKRGDPFMPKGAPGPLDWREFASLKEGVRGHLVVFHTGFPKDQAVADSLIRQVKERFGDVVHVHEEFDDDEDTTEQERQESNAFEVWLEGPEVIVYHARGECNVDLTEEQMGKILDDLETRVGDESILQIPCTKAPRFLIPGLTPLELQSRSY 334
            ASS  AG  R RT    R +    R      L  LG G  D+ D        DIDPL+ GPD    LL+ E E +  Q+       E  AA A ++    G     +  +AV                                + R DP MP+G   P +W + A+L EGVRG LVV HTG PKD+  A  ++  VKER+G V+H HE +DDDE+ T+ +R+++  FEVWLEGP V+ YH R +  +DL +EQ+ KILDDLE RV DE+IL     +  +F +PG T  E + + +
Sbjct:   79 ASSTLAGHQRRRTPSGGREEVSLPRPRRCRSLQPLGLGGMDEMD--------DIDPLEGGPDPDEILLQGEPELLRQQQXXXXXEAELAAAEAATVAAGKGPTKAELAEAAVXXXMASKTAGEGVGADEVAMAALGPKRKKRAEKVRVDPLMPRGGVAPNEWLDMANLAEGVRGILVVCHTGLPKDKKRATEVMNAVKERYGHVIHTHEWWDDDEELTDDDREDAGTFEVWLEGPTVVHYHERADGKLDLDDEQLDKILDDLEERVMDEAILGQYINEDFQFRLPGFTVPEQRFKQF 367
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig64.17299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5D7_ECTSI5.190e-4142.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXG7_9PHAE2.500e-3937.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..337
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.504

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig64contigF-serratus_M_contig64:199478..202107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig64.17299.1mRNA_F-serratus_M_contig64.17299.1Fucus serratus malemRNAF-serratus_M_contig64 198996..202299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig64.17299.1 ID=prot_F-serratus_M_contig64.17299.1|Name=mRNA_F-serratus_M_contig64.17299.1|organism=Fucus serratus male|type=polypeptide|length=338bp
MPSSRPAIMSLTALSALWPSSGFISTPSAISKQTTQLRRSSRFSASSPWA
GSNRSRTALVARRQRIGLRTAPFPGLTLGAGMADDDDVDPLEAELDIDPL
DAGPDIVGSLLEDEDEGIEDQEDGGVYGGETIAAAPSIRKRLGVKASAVV
LEEDDADAASMAALAAAAKDTAGKSQKKKKTRKRGDPFMPKGAPGPLDWR
EFASLKEGVRGHLVVFHTGFPKDQAVADSLIRQVKERFGDVVHVHEEFDD
DEDTTEQERQESNAFEVWLEGPEVIVYHARGECNVDLTEEQMGKILDDLE
TRVGDESILQIPCTKAPRFLIPGLTPLELQSRSYYPL*
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